adult liver stem cell Gene Set

Dataset TISSUES Text-mining Tissue Protein Expression Evidence Scores
Category structural or functional annotations
Type tissue
Description Hepatic progenitor cells can be isolated from fetal liver and extrahepatic tissues. (BRENDA Tissue and Enzyme Source Ontology, BTO_0004270)
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Genes

158 proteins co-occuring with the tissue adult liver stem cell in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores dataset.

Symbol Name Standardized Value
KRT19 keratin 19, type I 2.16338
KRT7 keratin 7, type II 2.02092
AFP alpha-fetoprotein 1.79549
EPCAM epithelial cell adhesion molecule 1.68155
ALB albumin 1.48176
PROM1 prominin 1 1.45983
THY1 Thy-1 cell surface antigen 1.27964
CD34 CD34 molecule 1.13678
KRT8 keratin 8, type II 1.08766
IGDCC4 immunoglobulin superfamily, DCC subclass, member 4 0.983688
DLK1 delta-like 1 homolog (Drosophila) 0.966793
TAT tyrosine aminotransferase 0.962903
KRT18 keratin 18, type I 0.946947
TDO2 tryptophan 2,3-dioxygenase 0.942215
HNF4A hepatocyte nuclear factor 4, alpha 0.916496
MATN2 matrilin 2 0.904127
FOXL1 forkhead box L1 0.900296
LAMB1 laminin, beta 1 0.890101
INHBC inhibin, beta C 0.885438
CDH22 cadherin 22, type 2 0.874862
CDH1 cadherin 1, type 1, E-cadherin (epithelial) 0.818576
CD44 CD44 molecule (Indian blood group) 0.76364
PCNA proliferating cell nuclear antigen 0.75371
GPC3 glypican 3 0.737206
MET MET proto-oncogene, receptor tyrosine kinase 0.726097
CXXC4 CXXC finger protein 4 0.724863
NOTCH1 notch 1 0.721577
PJA1 praja ring finger 1, E3 ubiquitin protein ligase 0.718292
GABRP gamma-aminobutyric acid (GABA) A receptor, pi 0.713369
SOX9 SRY (sex determining region Y)-box 9 0.704764
AGRN agrin 0.703127
NCAM1 neural cell adhesion molecule 1 0.665588
WNT3A wingless-type MMTV integration site family, member 3A 0.66071
GCFC2 GC-rich sequence DNA-binding factor 2 0.650154
ABCC3 ATP-binding cassette, sub-family C (CFTR/MRP), member 3 0.647721
SPINT1 serine peptidase inhibitor, Kunitz type 1 0.631527
ABCG2 ATP-binding cassette, sub-family G (WHITE), member 2 (Junior blood group) 0.625061
FGF22 fibroblast growth factor 22 0.605709
SAV1 salvador family WW domain containing protein 1 0.599273
FAH fumarylacetoacetate hydrolase (fumarylacetoacetase) 0.591641
SSTR4 somatostatin receptor 4 0.59124
GRHL2 grainyhead-like 2 (Drosophila) 0.588031
KREMEN1 kringle containing transmembrane protein 1 0.584823
FOXA2 forkhead box A2 0.58282
ARF4 ADP-ribosylation factor 4 0.56603
BMF Bcl2 modifying factor 0.556865
AKT1 v-akt murine thymoma viral oncogene homolog 1 0.55607
CCND1 cyclin D1 0.552093
COL9A3 collagen, type IX, alpha 3 0.541377
COL8A1 collagen, type VIII, alpha 1 0.540585
KLF3 Kruppel-like factor 3 (basic) 0.540585
S100P S100 calcium binding protein P 0.52635
NOTCH2NL notch 2 N-terminal like 0.525955
NOTCH2 notch 2 0.5228
G6PC glucose-6-phosphatase, catalytic subunit 0.517284
PARD3 par-3 family cell polarity regulator 0.510206
KRT14 keratin 14, type I 0.510206
DEFB1 defensin, beta 1 0.50079
TRIB1 tribbles pseudokinase 1 0.496874
BEX2 brain expressed X-linked 2 0.494528
MAFA v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog A 0.485935
COL5A2 collagen, type V, alpha 2 0.482428
BEX1 brain expressed, X-linked 1 0.48087
PRKCI protein kinase C, iota 0.466111
SAMM50 SAMM50 sorting and assembly machinery component 0.451042
POT1 protection of telomeres 1 0.437972
NEUROG3 neurogenin 3 0.433757
CNTNAP2 contactin associated protein-like 2 0.433374
NUMB numb homolog (Drosophila) 0.420004
RAB25 RAB25, member RAS oncogene family 0.417337
CLDN4 claudin 4 0.41087
FOXA1 forkhead box A1 0.409731
CD109 CD109 molecule 0.409351
MAPK10 mitogen-activated protein kinase 10 0.405555
DPP4 dipeptidyl-peptidase 4 0.401007
CYBRD1 cytochrome b reductase 1 0.396465
JAG1 jagged 1 0.395709
NR2F6 nuclear receptor subfamily 2, group F, member 6 0.394953
CITED1 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 1 0.394576
RAB3B RAB3B, member RAS oncogene family 0.393819
FOXA3 forkhead box A3 0.390421
NID2 nidogen 2 (osteonidogen) 0.389289
MIRLET7C microRNA let-7c 0.388535
VIPR2 vasoactive intestinal peptide receptor 2 0.388535
MIR93 microRNA 93 0.38665
MIR96 microRNA 96 0.381379
ITGB4 integrin, beta 4 0.368624
CHGA chromogranin A 0.364139
POU5F1 POU class 5 homeobox 1 0.36302
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.361527
MIR100 microRNA 100 0.359292
ST8SIA4 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 0.358546
COL4A2 collagen, type IV, alpha 2 0.35743
ROS1 ROS proto-oncogene 1 , receptor tyrosine kinase 0.352227
TP53 tumor protein p53 0.351114
CYP3A4 cytochrome P450, family 3, subfamily A, polypeptide 4 0.344818
LAMA5 laminin, alpha 5 0.34371
BCAT1 branched chain amino-acid transaminase 1, cytosolic 0.342602
TRIM24 tripartite motif containing 24 0.340019
PROX1 prospero homeobox 1 0.33965
ABCC4 ATP-binding cassette, sub-family C (CFTR/MRP), member 4 0.339282
PKM pyruvate kinase, muscle 0.336704
DKK2 dickkopf WNT signaling pathway inhibitor 2 0.334865
FFAR4 free fatty acid receptor 4 0.33046
CUL3 cullin 3 0.329727
FZD6 frizzled class receptor 6 0.319863
TACSTD2 tumor-associated calcium signal transducer 2 0.314046
ITGA6 integrin, alpha 6 0.310059
NID1 nidogen 1 0.307528
SLC2A5 solute carrier family 2 (facilitated glucose/fructose transporter), member 5 0.301758
LAMC2 laminin, gamma 2 0.29996
GCG glucagon 0.298524
WNT1 wingless-type MMTV integration site family, member 1 0.295297
OSM oncostatin M 0.293508
WNT3 wingless-type MMTV integration site family, member 3 0.282483
PNPLA3 patatin-like phospholipase domain containing 3 0.28213
HLCS holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase) 0.275794
GSTM3 glutathione S-transferase mu 3 (brain) 0.271604
GOT1 glutamic-oxaloacetic transaminase 1, soluble 0.267791
ANXA3 annexin A3 0.267102
NOTCH3 notch 3 0.266413
TNFRSF12A tumor necrosis factor receptor superfamily, member 12A 0.265038
INS insulin 0.261284
LAMB2 laminin, beta 2 (laminin S) 0.260267
FGF10 fibroblast growth factor 10 0.258243
THPO thrombopoietin 0.258243
CXCL12 chemokine (C-X-C motif) ligand 12 0.256902
S100A4 S100 calcium binding protein A4 0.246442
GDF2 growth differentiation factor 2 0.242672
GSTA4 glutathione S-transferase alpha 4 0.242363
DDIT4 DNA-damage-inducible transcript 4 0.240216
MUC1 mucin 1, cell surface associated 0.235457
CTGF connective tissue growth factor 0.234878
SDS serine dehydratase 0.234016
CDKN1A cyclin-dependent kinase inhibitor 1A (p21, Cip1) 0.231482
CYP2E1 cytochrome P450, family 2, subfamily E, polypeptide 1 0.230382
CYP7A1 cytochrome P450, family 7, subfamily A, polypeptide 1 0.229299
HMGA2 high mobility group AT-hook 2 0.228497
FGF4 fibroblast growth factor 4 0.22797
SMAD6 SMAD family member 6 0.22797
PDGFD platelet derived growth factor D 0.227707
SLURP1 secreted LY6/PLAUR domain containing 1 0.227445
COL4A1 collagen, type IV, alpha 1 0.226411
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.226411
GOT2 glutamic-oxaloacetic transaminase 2, mitochondrial 0.226155
NOTCH4 notch 4 0.224398
CLIP1 CAP-GLY domain containing linker protein 1 0.224398
AQP1 aquaporin 1 (Colton blood group) 0.223662
GGT2 gamma-glutamyltransferase 2 0.223419
LTB lymphotoxin beta (TNF superfamily, member 3) 0.22246
NKX2-2 NK2 homeobox 2 0.219928
DDR1 discoidin domain receptor tyrosine kinase 1 0.219047
CPEB1 cytoplasmic polyadenylation element binding protein 1 0.218398
ASXL1 additional sex combs like transcriptional regulator 1 0.217974
HNF1A HNF1 homeobox A 0.217974
BAD BCL2-associated agonist of cell death 0.216528
CDH2 cadherin 2, type 1, N-cadherin (neuronal) 0.214576
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 0.213112