acquired immunodeficiency syndrome Gene Set

Dataset GWASdb SNP-Disease Associations
Category disease or phenotype associations
Type disease
Description A Human immunodeficiency virus infectious disease that results_in reduction in the numbers of CD4-bearing helper T cells below 200 per ┬ÁL of blood or 14% of all lymphocytes thereby rendering the subject highly vulnerable to life-threatening infections and cancers, has_material_basis_in Human immunodeficiency virus 1 or has_material_basis_in Human immunodeficiency virus 2, which are transmitted_by sexual contact, transmitted_by transfer of blood, semen, vaginal fluid, pre-ejaculate, or breast milk, transmitted_by congenital method, and transmitted_by contaminated needles. Opportunistic infections are common in people with AIDS. (Human Disease Ontology, DOID_635)
External Link http://jjwanglab.org/gwasdb/gwasdb2/gwasdb2/go_trait/DOID:635
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Genes

44 genes associated with the disease acquired immunodeficiency syndrome in GWAS and other genetic association datasets from the GWASdb SNP-Disease Associations dataset.

Symbol Name Standardized Value
HCP5 HLA complex P5 (non-protein coding) 1.97455
SNORD48 small nucleolar RNA, C/D box 48 1.62272
PARD3B par-3 family cell polarity regulator beta 1.47287
PSORS1C1 psoriasis susceptibility 1 candidate 1 1.3021
TNF tumor necrosis factor 1.26667
TNXB tenascin XB 1.25542
OR12D3 olfactory receptor, family 12, subfamily D, member 3 1.2461
ZNRD1 zinc ribbon domain containing 1 1.24194
RNF39 ring finger protein 39 1.24067
HCG18 HLA complex group 18 (non-protein coding) 1.23448
DGKI diacylglycerol kinase, iota 1.23034
LOC100129636 uncharacterized LOC100129636 1.20071
SOX5 SRY (sex determining region Y)-box 5 1.14463
MICA MHC class I polypeptide-related sequence A 1.09927
PSORS1C2 psoriasis susceptibility 1 candidate 2 1.07808
LOC100506371 uncharacterized LOC100506371 1.07599
RXRG retinoid X receptor, gamma 1.07599
NOTCH4 notch 4 1.0412
TGFBRAP1 transforming growth factor, beta receptor associated protein 1 1.00407
HCG9 HLA complex group 9 (non-protein coding) 0.971452
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.939181
C1ORF174 chromosome 1 open reading frame 174 0.929316
MICB MHC class I polypeptide-related sequence B 0.898875
OCA2 oculocutaneous albinism II 0.896938
HLA-B major histocompatibility complex, class I, B 0.891373
DOCK5 dedicator of cytokinesis 5 0.852303
MYOM3 myomesin 3 0.851323
FER1L6 fer-1-like family member 6 0.840723
GALNT11 polypeptide N-acetylgalactosaminyltransferase 11 0.831584
CDK6 cyclin-dependent kinase 6 0.810532
ETV6 ets variant 6 0.798811
FOCAD focadhesin 0.751629
TGIF1 TGFB-induced factor homeobox 1 0.732629
DERL1 derlin 1 0.721597
GRAMD3 GRAM domain containing 3 0.70813
FUT9 fucosyltransferase 9 (alpha (1,3) fucosyltransferase) 0.705334
ARHGAP26 Rho GTPase activating protein 26 0.695375
SEMA6A sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A 0.689554
CMPK2 cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial 0.683749
SCHIP1 schwannomin interacting protein 1 0.682275
TYR tyrosinase 0.676587
ELMO1 engulfment and cell motility 1 0.673994
AMPH amphiphysin 0.668836
PLXNC1 plexin C1 0.662072