abnormality of the musculature Gene Set

Dataset GWASdb SNP-Phenotype Associations
Category disease or phenotype associations
Type phenotype
Description Abnormality originating in one or more muscles, i.e., of the set of muscles of body. (Human Phenotype Ontology, HP_0003011)
External Link http://jjwanglab.org/gwasdb/gwasdb2/gwasdb2/go_trait/HP:0003011
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Genes

93 genes associated with the abnormality of the musculature phenotype in GWAS datasets from the GWASdb SNP-Phenotype Associations dataset.

Symbol Name Standardized Value
TCF19 transcription factor 19 2.07475
MSH5 mutS homolog 5 2.01963
C2 complement component 2 2.00767
CFB complement factor B 1.97352
STK19 serine/threonine kinase 19 1.96889
C6ORF10 chromosome 6 open reading frame 10 1.92534
DPCR1 diffuse panbronchiolitis critical region 1 1.87201
BTNL2 butyrophilin-like 2 1.86843
VARS2 valyl-tRNA synthetase 2, mitochondrial 1.85081
C6ORF15 chromosome 6 open reading frame 15 1.84976
HLA-DQA1 major histocompatibility complex, class II, DQ alpha 1 1.8475
GPANK1 G patch domain and ankyrin repeats 1 1.84624
PRRC2A proline-rich coiled-coil 2A 1.84572
ABCF1 ATP-binding cassette, sub-family F (GCN20), member 1 1.78796
HCG18 HLA complex group 18 (non-protein coding) 1.7724
NOTCH4 notch 4 1.75157
MUC22 mucin 22 1.75105
TRIM31 tripartite motif containing 31 1.75084
MUC21 mucin 21, cell surface associated 1.74576
RNF39 ring finger protein 39 1.72198
POU5F1 POU class 5 homeobox 1 1.70369
ZNRD1 zinc ribbon domain containing 1 1.68936
PSORS1C1 psoriasis susceptibility 1 candidate 1 1.68272
HCG9 HLA complex group 9 (non-protein coding) 1.66167
PSORS1C3 psoriasis susceptibility 1 candidate 3 (non-protein coding) 1.62711
MICB MHC class I polypeptide-related sequence B 1.62423
GPSM3 G-protein signaling modulator 3 1.56677
UGT1A10 UDP glucuronosyltransferase 1 family, polypeptide A10 0.996461
TNIP1 TNFAIP3 interacting protein 1 0.396812
PLCL1 phospholipase C-like 1 0.391156
RYR2 ryanodine receptor 2 (cardiac) 0.356732
LOC100506023 uncharacterized LOC100506023 0.326078
IKZF3 IKAROS family zinc finger 3 (Aiolos) 0.318685
TRAF3 TNF receptor-associated factor 3 0.314246
DTNBP1 dystrobrevin binding protein 1 0.31249
SGCZ sarcoglycan, zeta 0.309552
GSDMB gasdermin B 0.306788
TNPO3 transportin 3 0.306095
RORA RAR-related orphan receptor A 0.303922
FAM159A family with sequence similarity 159, member A 0.303922
ZPBP2 zona pellucida binding protein 2 0.300207
SEC22A SEC22 vesicle trafficking protein homolog A (S. cerevisiae) 0.294468
NTF3 neurotrophin 3 0.293716
KALRN kalirin, RhoGEF kinase 0.29248
LRRK2 leucine-rich repeat kinase 2 0.290267
PLEKHG5 pleckstrin homology domain containing, family G (with RhoGef domain) member 5 0.290267
MEGF11 multiple EGF-like-domains 11 0.287568
ZNF667 zinc finger protein 667 0.286259
RASSF2 Ras association (RalGDS/AF-6) domain family member 2 0.2837
CORO1C coronin, actin binding protein, 1C 0.2837
NUF2 NUF2, NDC80 kinetochore complex component 0.282543
NKAIN3 Na+/K+ transporting ATPase interacting 3 0.281456
MTSS1 metastasis suppressor 1 0.281456
MAMLD1 mastermind-like domain containing 1 0.280429
IVD isovaleryl-CoA dehydrogenase 0.280429
ROR1 receptor tyrosine kinase-like orphan receptor 1 0.279457
ANK1 ankyrin 1, erythrocytic 0.279457
RRN3 RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae) 0.276021
PTPN22 protein tyrosine phosphatase, non-receptor type 22 (lymphoid) 0.276021
RSBN1 round spermatid basic protein 1 0.274521
BARX2 BARX homeobox 2 0.273815
ADCY5 adenylate cyclase 5 0.273137
STARD3 StAR-related lipid transfer (START) domain containing 3 0.272483
CSN1S2BP casein alpha s2-like B, pseudogene 0.272483
SLIT3 slit homolog 3 (Drosophila) 0.271852
SLC39A11 solute carrier family 39, member 11 0.271243
EDA ectodysplasin A 0.271243
SH3GLB2 SH3-domain GRB2-like endophilin B2 0.270654
CAMKMT calmodulin-lysine N-methyltransferase 0.26898
CNTN5 contactin 5 0.26898
PSTPIP1 proline-serine-threonine phosphatase interacting protein 1 0.268388
IDO2 indoleamine 2,3-dioxygenase 2 0.268388
NPAS3 neuronal PAS domain protein 3 0.267813
GNA14 guanine nucleotide binding protein (G protein), alpha 14 0.267254
PHTF1 putative homeodomain transcription factor 1 0.267254
TOX thymocyte selection-associated high mobility group box 0.266711
KIAA1549 KIAA1549 0.266182
STAT4 signal transducer and activator of transcription 4 0.265163
NFATC1 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1 0.265163
KCNAB1 potassium channel, voltage gated subfamily A regulatory beta subunit 1 0.264673
TBX5 T-box 5 0.264195
NKX2-3 NK2 homeobox 3 0.264195
PDE4D phosphodiesterase 4D, cAMP-specific 0.263728
ANKRD55 ankyrin repeat domain 55 0.263728
RAPGEF4 Rap guanine nucleotide exchange factor (GEF) 4 0.263271
SCAMP5 secretory carrier membrane protein 5 0.263271
CTNNA3 catenin (cadherin-associated protein), alpha 3 0.262825
INADL InaD-like (Drosophila) 0.262389
VAC14 Vac14 homolog (S. cerevisiae) 0.262389
BCL2L15 BCL2-like 15 0.262389
FGD5 FYVE, RhoGEF and PH domain containing 5 0.261962
TCAP titin-cap 0.261962
CD226 CD226 molecule 0.261962