abnormality of the middle ear Gene Set

Dataset GWASdb SNP-Phenotype Associations
Category disease or phenotype associations
Type phenotype
Description An abnormality of the middle ear. (Human Phenotype Ontology, HP_0000370)
External Link http://jjwanglab.org/gwasdb/gwasdb2/gwasdb2/go_trait/HP:0000370
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Genes

52 genes associated with the abnormality of the middle ear phenotype in GWAS datasets from the GWASdb SNP-Phenotype Associations dataset.

Symbol Name Standardized Value
HLA-DRA major histocompatibility complex, class II, DR alpha 1.65292
NOTCH4 notch 4 1.43837
HLA-DPA1 major histocompatibility complex, class II, DP alpha 1 1.42949
STAT4 signal transducer and activator of transcription 4 1.09351
TNPO3 transportin 3 1.09351
PSORS1C1 psoriasis susceptibility 1 candidate 1 0.749994
AGER advanced glycosylation end product-specific receptor 0.657798
TNXB tenascin XB 0.656601
CD247 CD247 molecule 0.650124
TNIP1 TNFAIP3 interacting protein 1 0.615522
HLA-DPB1 major histocompatibility complex, class II, DP beta 1 0.600358
RELN reelin 0.542759
SOX5 SRY (sex determining region Y)-box 5 0.495598
HSPA1L heat shock 70kDa protein 1-like 0.481531
STK19 serine/threonine kinase 19 0.469583
HLA-DQB2 major histocompatibility complex, class II, DQ beta 2 0.459734
ZNF383 zinc finger protein 383 0.445845
MSH5 mutS homolog 5 0.435
GRB10 growth factor receptor-bound protein 10 0.424122
C6ORF10 chromosome 6 open reading frame 10 0.417428
PRRC2A proline-rich coiled-coil 2A 0.411719
OPCML opioid binding protein/cell adhesion molecule-like 0.405029
ZNF527 zinc finger protein 527 0.403246
CDH18 cadherin 18, type 2 0.401039
DYSF dysferlin 0.400734
SMAD3 SMAD family member 3 0.397252
CNDP2 CNDP dipeptidase 2 (metallopeptidase M20 family) 0.396463
DGKQ diacylglycerol kinase, theta 110kDa 0.395556
RBMS3 RNA binding motif, single stranded interacting protein 3 0.395244
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.395113
ZNF423 zinc finger protein 423 0.393515
SLIT3 slit homolog 3 (Drosophila) 0.392019
WBSCR17 Williams-Beuren syndrome chromosome region 17 0.390094
CACNA2D1 calcium channel, voltage-dependent, alpha 2/delta subunit 1 0.389425
KIF7 kinesin family member 7 0.388111
SFSWAP splicing factor, suppressor of white-apricot family 0.382642
TPPP tubulin polymerization promoting protein 0.381391
ARMC9 armadillo repeat containing 9 0.380054
TSPAN16 tetraspanin 16 0.379847
IRAK2 interleukin-1 receptor-associated kinase 2 0.379728
NOL10 nucleolar protein 10 0.379409
CHODL chondrolectin 0.37905
NPAS3 neuronal PAS domain protein 3 0.378938
ZNF585A zinc finger protein 585A 0.378922
C1QB complement component 1, q subcomponent, B chain 0.378224
CDYL2 chromodomain protein, Y-like 2 0.378089
SUSD3 sushi domain containing 3 0.377808
CADPS2 Ca++-dependent secretion activator 2 0.377504
FBXO32 F-box protein 32 0.377476
HPGDS hematopoietic prostaglandin D synthase 0.377236
IL12RB2 interleukin 12 receptor, beta 2 0.367763
TICRR TOPBP1-interacting checkpoint and replication regulator 0.362254