abnormality of the femoral neck Gene Set

Dataset GWASdb SNP-Phenotype Associations
Category disease or phenotype associations
Type phenotype
Description An abnormality of the femoral neck (which is the process of bone, connecting the femoral head with the femoral shaft). (Human Phenotype Ontology, HP_0003367)
External Link http://jjwanglab.org/gwasdb/gwasdb2/gwasdb2/go_trait/HP:0003367
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Genes

70 genes associated with the abnormality of the femoral neck phenotype in GWAS datasets from the GWASdb SNP-Phenotype Associations dataset.

Symbol Name Standardized Value
NRCAM neuronal cell adhesion molecule 1.1784
RTP3 receptor (chemosensory) transporter protein 3 1.13655
LRRC2 leucine rich repeat containing 2 1.08405
LINGO2 leucine rich repeat and Ig domain containing 2 1.01337
UMOD uromodulin 1.00059
TRAPPC9 trafficking protein particle complex 9 0.98964
HK2 hexokinase 2 0.969142
C4ORF45 chromosome 4 open reading frame 45 0.944405
PDE4D phosphodiesterase 4D, cAMP-specific 0.921595
DOK6 docking protein 6 0.862298
ACSF3 acyl-CoA synthetase family member 3 0.835282
CNST consortin, connexin sorting protein 0.82221
GYPC glycophorin C (Gerbich blood group) 0.81905
LPPR1 lipid phosphate phosphatase-related protein type 1 0.807106
FAM26D family with sequence similarity 26, member D 0.787873
FA2H fatty acid 2-hydroxylase 0.775536
DLGAP1 discs, large (Drosophila) homolog-associated protein 1 0.767198
RXFP2 relaxin/insulin-like family peptide receptor 2 0.766212
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) 0.757258
PPARD peroxisome proliferator-activated receptor delta 0.755257
MSRA methionine sulfoxide reductase A 0.754763
CHL1 cell adhesion molecule L1-like 0.752816
SGCG sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein) 0.750909
C12ORF42 chromosome 12 open reading frame 42 0.744535
ADCY8 adenylate cyclase 8 (brain) 0.724474
CDH13 cadherin 13 0.711838
LINC00540 long intergenic non-protein coding RNA 540 0.709012
RSPO2 R-spondin 2 0.704251
TESK2 testis-specific kinase 2 0.700393
ADAMTS16 ADAM metallopeptidase with thrombospondin type 1 motif, 16 0.70005
CALCA calcitonin-related polypeptide alpha 0.697346
PACRG PARK2 co-regulated 0.693745
PTPRT protein tyrosine phosphatase, receptor type, T 0.668247
FLJ32955 0.665784
BMPER BMP binding endothelial regulator 0.661032
ABI3BP ABI family, member 3 (NESH) binding protein 0.657238
RWDD1 RWD domain containing 1 0.656496
RSPH4A radial spoke head 4 homolog A (Chlamydomonas) 0.65122
PNPLA6 patatin-like phospholipase domain containing 6 0.648884
RBFOX2 RNA binding protein, fox-1 homolog (C. elegans) 2 0.647618
FOXP1 forkhead box P1 0.647367
TLN2 talin 2 0.647116
DNER delta/notch-like EGF repeat containing 0.642462
RHOG ras homolog family member G 0.639391
TSPAN15 tetraspanin 15 0.63395
MEGF11 multiple EGF-like-domains 11 0.631981
CMTM8 CKLF-like MARVEL transmembrane domain containing 8 0.627944
HTR7 5-hydroxytryptamine (serotonin) receptor 7, adenylate cyclase-coupled 0.626907
GSTM1 glutathione S-transferase mu 1 0.623061
SGCD sarcoglycan, delta (35kDa dystrophin-associated glycoprotein) 0.621289
CREB5 cAMP responsive element binding protein 5 0.620318
RBFOX1 RNA binding protein, fox-1 homolog (C. elegans) 1 0.618403
RRBP1 ribosome binding protein 1 0.61516
DENND1A DENN/MADD domain containing 1A 0.612337
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.606737
KPNA5 karyopherin alpha 5 (importin alpha 6) 0.60465
TCF7L1 transcription factor 7-like 1 (T-cell specific, HMG-box) 0.603793
CDCP1 CUB domain containing protein 1 0.602605
HNF1B HNF1 homeobox B 0.598311
PDZRN4 PDZ domain containing ring finger 4 0.594816
ROR1 receptor tyrosine kinase-like orphan receptor 1 0.59159
GOLM1 golgi membrane protein 1 0.58876
SMG6 SMG6 nonsense mediated mRNA decay factor 0.585756
PRKCB protein kinase C, beta 0.585507
BNC2 basonuclin 2 0.583665
KCNAB2 potassium channel, voltage gated subfamily A regulatory beta subunit 2 0.580913
PLCE1 phospholipase C, epsilon 1 0.580093
KAT2B K(lysine) acetyltransferase 2B 0.578704
RAI14 retinoic acid induced 14 0.57412
LTF lactotransferrin 0.451933