abnormality of reproductive system physiology Gene Set

Dataset GWASdb SNP-Phenotype Associations
Category disease or phenotype associations
Type phenotype
Description An abnormal functionality of the genital system. (Human Phenotype Ontology, HP_0000080)
External Link http://jjwanglab.org/gwasdb/gwasdb2/gwasdb2/go_trait/HP:0000080
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Genes

65 genes associated with the abnormality of reproductive system physiology phenotype in GWAS datasets from the GWASdb SNP-Phenotype Associations dataset.

Symbol Name Standardized Value
IRF4 interferon regulatory factor 4 0.683839
PTK2 protein tyrosine kinase 2 0.683355
CHSY1 chondroitin sulfate synthase 1 0.639275
CFB complement factor B 0.576647
HLA-DRA major histocompatibility complex, class II, DR alpha 0.571767
TDRKH tudor and KH domain containing 0.52053
C6ORF10 chromosome 6 open reading frame 10 0.509797
FAT1 FAT atypical cadherin 1 0.496526
FAM155A family with sequence similarity 155, member A 0.441554
BTNL2 butyrophilin-like 2 0.424122
MOBP myelin-associated oligodendrocyte basic protein 0.42226
SOX5 SRY (sex determining region Y)-box 5 0.416272
LOC100289473 cytoskeleton associated protein 2-like pseudogene 0.416272
ACOXL acyl-CoA oxidase-like 0.410562
PTPRD protein tyrosine phosphatase, receptor type, D 0.40084
FSHR follicle stimulating hormone receptor 0.398896
GALNT12 polypeptide N-acetylgalactosaminyltransferase 12 0.3954
SLCO5A1 solute carrier organic anion transporter family, member 5A1 0.392159
SP140 SP140 nuclear body protein 0.391051
PDE3A phosphodiesterase 3A, cGMP-inhibited 0.382682
TTC7A tetratricopeptide repeat domain 7A 0.382682
IRF8 interferon regulatory factor 8 0.382001
PTGFRN prostaglandin F2 receptor inhibitor 0.38106
MARCO macrophage receptor with collagenous structure 0.376797
ESR2 estrogen receptor 2 (ER beta) 0.376018
ANAPC4 anaphase promoting complex subunit 4 0.37319
ASTN2 astrotactin 2 0.372514
LRP1B low density lipoprotein receptor-related protein 1B 0.370544
NOTCH4 notch 4 0.366566
FARP2 FERM, RhoGEF and pleckstrin domain protein 2 0.366486
NTM neurotrimin 0.366096
RMDN2 regulator of microtubule dynamics 2 0.36461
C9ORF3 chromosome 9 open reading frame 3 0.36461
CRACR2A calcium release activated channel regulator 2A 0.36461
PHACTR2 phosphatase and actin regulator 2 0.36461
CELA2A chymotrypsin-like elastase family, member 2A 0.362606
GLI2 GLI family zinc finger 2 0.362606
AOX2P aldehyde oxidase 2 pseudogene 0.361329
CNNM3 cyclin and CBS domain divalent metal cation transport mediator 3 0.360941
F13B coagulation factor XIII, B polypeptide 0.360941
DNAH10 dynein, axonemal, heavy chain 10 0.36073
PCSK5 proprotein convertase subtilisin/kexin type 5 0.360282
OR56A4 olfactory receptor, family 56, subfamily A, member 4 0.358648
PHF2P1 PHD finger protein 2 pseudogene 1 0.357517
MACROD2 MACRO domain containing 2 0.356942
CNTN5 contactin 5 0.355694
LINGO2 leucine rich repeat and Ig domain containing 2 0.354128
LHFPL3 lipoma HMGIC fusion partner-like 3 0.352711
TSNARE1 t-SNARE domain containing 1 0.349562
EPSTI1 epithelial stromal interaction 1 (breast) 0.34887
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) 0.347249
DSCAML1 Down syndrome cell adhesion molecule like 1 0.347074
USP8 ubiquitin specific peptidase 8 0.343091
DPF3 D4, zinc and double PHD fingers, family 3 0.342193
NELL1 NEL-like 1 (chicken) 0.340787
CSMD1 CUB and Sushi multiple domains 1 0.340603
LOC100288181 uncharacterized LOC100288181 0.338499
PKNOX2 PBX/knotted 1 homeobox 2 0.335106
PEBP4 phosphatidylethanolamine-binding protein 4 0.335043
STK32C serine/threonine kinase 32C 0.334456
SGSM1 small G protein signaling modulator 1 0.33386
ARHGAP42 Rho GTPase activating protein 42 0.332644
SLC35F4 solute carrier family 35, member F4 0.331311
TEX36 testis expressed 36 0.331012
PSAT1 phosphoserine aminotransferase 1 0.306202