abnormality of nucleobase metabolism Gene Set

Dataset GWASdb SNP-Phenotype Associations
Category disease or phenotype associations
Type phenotype
Description An abnormality of a nucleobase metabolic process. (Human Phenotype Ontology, HP_0010932)
External Link http://jjwanglab.org/gwasdb/gwasdb2/gwasdb2/go_trait/HP:0010932
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Genes

65 genes associated with the abnormality of nucleobase metabolism phenotype in GWAS datasets from the GWASdb SNP-Phenotype Associations dataset.

Symbol Name Standardized Value
ACKR1 atypical chemokine receptor 1 (Duffy blood group) 3.01244
GGT1 gamma-glutamyltransferase 1 2.63404
LUC7L LUC7-like (S. cerevisiae) 2.31025
SLC22A12 solute carrier family 22 (organic anion/urate transporter), member 12 2.24728
NRXN2 neurexin 2 2.2397
CCND3 cyclin D3 2.20594
TMPRSS6 transmembrane protease, serine 6 2.10221
SLC2A9 solute carrier family 2 (facilitated glucose transporter), member 9 2.07915
G6PD glucose-6-phosphate dehydrogenase 2.00923
SH2B3 SH2B adaptor protein 3 1.91141
HFE hemochromatosis 1.75707
WDR1 WD repeat domain 1 1.70441
LIPC lipase, hepatic 1.68604
RCL1 RNA terminal phosphate cyclase-like 1 1.66651
PSMD3 proteasome (prosome, macropain) 26S subunit, non-ATPase, 3 1.66327
ABCG2 ATP-binding cassette, sub-family G (WHITE), member 2 (Junior blood group) 1.63258
ALPL alkaline phosphatase, liver/bone/kidney 1.58488
PNPLA3 patatin-like phospholipase domain containing 3 1.54757
GP1BA glycoprotein Ib (platelet), alpha polypeptide 1.54733
MARCH8 membrane-associated ring finger (C3HC4) 8, E3 ubiquitin protein ligase 1.53426
GCKR glucokinase (hexokinase 4) regulator 1.50656
GPLD1 glycosylphosphatidylinositol specific phospholipase D1 1.48419
THPO thrombopoietin 1.45654
PRKAG2 protein kinase, AMP-activated, gamma 2 non-catalytic subunit 1.42629
SLC14A2 solute carrier family 14 (urea transporter), member 2 1.41863
TNFRSF13B tumor necrosis factor receptor superfamily, member 13B 1.40061
THRB thyroid hormone receptor, beta 1.39376
TIMM23 translocase of inner mitochondrial membrane 23 homolog (yeast) 1.37339
ALDH2 aldehyde dehydrogenase 2 family (mitochondrial) 1.36671
DOCK7 dedicator of cytokinesis 7 1.32884
HBA1 hemoglobin, alpha 1 1.31069
DENND4A DENN/MADD domain containing 4A 1.30983
TMEM79 transmembrane protein 79 1.30781
BRAP BRCA1 associated protein 1.28282
SAMM50 SAMM50 sorting and assembly machinery component 1.26441
UBE2L3 ubiquitin-conjugating enzyme E2L 3 1.24751
WDR72 WD repeat domain 72 1.22485
CDK6 cyclin-dependent kinase 6 1.21853
XPO7 exportin 7 1.19958
TERT telomerase reverse transcriptase 1.19958
RPS11 ribosomal protein S11 1.19958
LRP2 low density lipoprotein receptor-related protein 2 1.1898
PRKCE protein kinase C, epsilon 1.18904
TYMP thymidine phosphorylase 1.18704
ABO ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase) 1.18704
CCDC162P coiled-coil domain containing 162, pseudogene 1.17972
TFR2 transferrin receptor 2 1.13677
CETP cholesteryl ester transfer protein, plasma 1.13544
BAZ1B bromodomain adjacent to zinc finger domain, 1B 1.11203
MMP26 matrix metallopeptidase 26 1.08891
ITGA4 integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor) 1.08659
GALP galanin-like peptide 1.05616
NCAPH2 non-SMC condensin II complex, subunit H2 1.04365
MMP25 matrix metallopeptidase 25 1.02729
EPO erythropoietin 1.02729
ITFG3 integrin alpha FG-GAP repeat containing 3 0.854024
PTPRM protein tyrosine phosphatase, receptor type, M 0.817516
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.760343
APOC1 apolipoprotein C-I 0.690896
TPM4 tropomyosin 4 0.576102
ZAN zonadhesin (gene/pseudogene) 0.564644
MYB v-myb avian myeloblastosis viral oncogene homolog 0.470822
SLC17A3 solute carrier family 17 (organic anion transporter), member 3 0.466034
TFRC transferrin receptor 0.449892
SPTA1 spectrin, alpha, erythrocytic 1 0.443596