abnormalities of placenta or umbilical cord Gene Set

Dataset GWASdb SNP-Phenotype Associations
Category disease or phenotype associations
Type phenotype
Description An abnormality of the placenta (the organ that connects the developing fetus to the uterine wall) or of the umbilical cord (the cord that connects the fetus to the placenta). (Human Phenotype Ontology, HP_0001194)
External Link http://jjwanglab.org/gwasdb/gwasdb2/gwasdb2/go_trait/HP:0001194
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Genes

63 genes associated with the abnormalities of placenta or umbilical cord phenotype in GWAS datasets from the GWASdb SNP-Phenotype Associations dataset.

Symbol Name Standardized Value
ACKR1 atypical chemokine receptor 1 (Duffy blood group) 3.01244
GGT1 gamma-glutamyltransferase 1 2.63404
LUC7L LUC7-like (S. cerevisiae) 2.31025
SLC22A12 solute carrier family 22 (organic anion/urate transporter), member 12 2.24728
NRXN2 neurexin 2 2.2397
CCND3 cyclin D3 2.20594
TMPRSS6 transmembrane protease, serine 6 2.10221
SLC2A9 solute carrier family 2 (facilitated glucose transporter), member 9 2.07915
ABO ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase) 2.01405
G6PD glucose-6-phosphate dehydrogenase 2.00923
SH2B3 SH2B adaptor protein 3 1.91141
HFE hemochromatosis 1.75707
LIPC lipase, hepatic 1.68604
RCL1 RNA terminal phosphate cyclase-like 1 1.66651
PSMD3 proteasome (prosome, macropain) 26S subunit, non-ATPase, 3 1.66327
ABCG2 ATP-binding cassette, sub-family G (WHITE), member 2 (Junior blood group) 1.63258
ALPL alkaline phosphatase, liver/bone/kidney 1.58488
PNPLA3 patatin-like phospholipase domain containing 3 1.54757
GP1BA glycoprotein Ib (platelet), alpha polypeptide 1.54733
MARCH8 membrane-associated ring finger (C3HC4) 8, E3 ubiquitin protein ligase 1.53426
GCKR glucokinase (hexokinase 4) regulator 1.50656
GPLD1 glycosylphosphatidylinositol specific phospholipase D1 1.48419
THPO thrombopoietin 1.45654
PRKAG2 protein kinase, AMP-activated, gamma 2 non-catalytic subunit 1.42629
SLC14A2 solute carrier family 14 (urea transporter), member 2 1.41863
TNFRSF13B tumor necrosis factor receptor superfamily, member 13B 1.40061
THRB thyroid hormone receptor, beta 1.39376
TIMM23 translocase of inner mitochondrial membrane 23 homolog (yeast) 1.37339
ALDH2 aldehyde dehydrogenase 2 family (mitochondrial) 1.36671
DOCK7 dedicator of cytokinesis 7 1.32884
HBA1 hemoglobin, alpha 1 1.31069
DENND4A DENN/MADD domain containing 4A 1.30983
TMEM79 transmembrane protein 79 1.30781
BRAP BRCA1 associated protein 1.28282
SAMM50 SAMM50 sorting and assembly machinery component 1.26441
UBE2L3 ubiquitin-conjugating enzyme E2L 3 1.24751
WDR72 WD repeat domain 72 1.22485
CDK6 cyclin-dependent kinase 6 1.21853
RPS11 ribosomal protein S11 1.19958
XPO7 exportin 7 1.19958
TERT telomerase reverse transcriptase 1.19958
LRP2 low density lipoprotein receptor-related protein 2 1.1898
PRKCE protein kinase C, epsilon 1.18904
TYMP thymidine phosphorylase 1.18704
CCDC162P coiled-coil domain containing 162, pseudogene 1.17972
TFR2 transferrin receptor 2 1.13677
CETP cholesteryl ester transfer protein, plasma 1.13544
BAZ1B bromodomain adjacent to zinc finger domain, 1B 1.11203
MMP26 matrix metallopeptidase 26 1.08891
ITGA4 integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor) 1.08659
GALP galanin-like peptide 1.05616
NCAPH2 non-SMC condensin II complex, subunit H2 1.04365
MMP25 matrix metallopeptidase 25 1.02729
EPO erythropoietin 1.02729
ITFG3 integrin alpha FG-GAP repeat containing 3 0.854024
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.760343
APOC1 apolipoprotein C-I 0.690896
TPM4 tropomyosin 4 0.576102
ZAN zonadhesin (gene/pseudogene) 0.564644
MYB v-myb avian myeloblastosis viral oncogene homolog 0.470822
SLC17A3 solute carrier family 17 (organic anion transporter), member 3 0.466034
TFRC transferrin receptor 0.449892
SPTA1 spectrin, alpha, erythrocytic 1 0.443596