Skin Cutaneous Melanoma_SKCM_TCGA-W3-A824-06A-21R-A352-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Skin Cutaneous Melanoma_SKCM (The Cancer Genome Atlas)
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Genes

339 genes with high or low expression in Skin Cutaneous Melanoma_SKCM_TCGA-W3-A824-06A-21R-A352-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABCD4 ATP-binding cassette, sub-family D (ALD), member 4
ABHD11-AS1 ABHD11 antisense RNA 1 (tail to tail)
ADAT2 adenosine deaminase, tRNA-specific 2
ADPRM ADP-ribose/CDP-alcohol diphosphatase, manganese-dependent
AIPL1 aryl hydrocarbon receptor interacting protein-like 1
AKAP3 A kinase (PRKA) anchor protein 3
ALAD aminolevulinate dehydratase
ANAPC11 anaphase promoting complex subunit 11
ANKRD24 ankyrin repeat domain 24
AP3S1 adaptor-related protein complex 3, sigma 1 subunit
APOBEC3A apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A
ARHGAP24 Rho GTPase activating protein 24
ATAD1 ATPase family, AAA domain containing 1
ATP5I ATP synthase, H+ transporting, mitochondrial Fo complex, subunit E
ATP6AP1L ATPase, H+ transporting, lysosomal accessory protein 1-like
B3GALT6 UDP-Gal:betaGal beta 1,3-galactosyltransferase polypeptide 6
B3GAT3 beta-1,3-glucuronyltransferase 3
B3GNTL1 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1
B4GALNT4 beta-1,4-N-acetyl-galactosaminyl transferase 4
BAIAP2 BAI1-associated protein 2
BATF2 basic leucine zipper transcription factor, ATF-like 2
BAX BCL2-associated X protein
BIN3 bridging integrator 3
BST2 bone marrow stromal cell antigen 2
C12ORF71 chromosome 12 open reading frame 71
C16ORF86 chromosome 16 open reading frame 86
C17ORF78 chromosome 17 open reading frame 78
C1ORF146 chromosome 1 open reading frame 146
C9ORF66 chromosome 9 open reading frame 66
CAMK2N2 calcium/calmodulin-dependent protein kinase II inhibitor 2
CBR3 carbonyl reductase 3
CBWD5 COBW domain containing 5
CCBL1 cysteine conjugate-beta lyase, cytoplasmic
CCDC137 coiled-coil domain containing 137
CCDC183 coiled-coil domain containing 183
CCDC85B coiled-coil domain containing 85B
CCL7 chemokine (C-C motif) ligand 7
CDK10 cyclin-dependent kinase 10
CERS5 ceramide synthase 5
CFAP52 cilia and flagella associated protein 52
CHCHD1 coiled-coil-helix-coiled-coil-helix domain containing 1
CHCHD6 coiled-coil-helix-coiled-coil-helix domain containing 6
CLEC11A C-type lectin domain family 11, member A
CLYBL citrate lyase beta like
COX14 COX14 cytochrome c oxidase assembly factor
CRYL1 crystallin, lambda 1
CUEDC2 CUE domain containing 2
CYB5D2 cytochrome b5 domain containing 2
CYGB cytoglobin
CYP27A1 cytochrome P450, family 27, subfamily A, polypeptide 1
DBIL5P diazepam binding inhibitor-like 5, pseudogene
DBNDD1 dysbindin (dystrobrevin binding protein 1) domain containing 1
DBP D site of albumin promoter (albumin D-box) binding protein
DCTN3 dynactin 3 (p22)
DDB2 damage-specific DNA binding protein 2, 48kDa
DEAF1 DEAF1 transcription factor
DHX58 DEXH (Asp-Glu-X-His) box polypeptide 58
DNAJC1 DnaJ (Hsp40) homolog, subfamily C, member 1
DNM1P46 dynamin 1 pseudogene 46
DPYSL4 dihydropyrimidinase-like 4
DYNLT1 dynein, light chain, Tctex-type 1
DYTN dystrotelin
EFNB3 ephrin-B3
EGLN1 egl-9 family hypoxia-inducible factor 1
ELP3 elongator acetyltransferase complex subunit 3
EN1 engrailed homeobox 1
ENHO energy homeostasis associated
EPSTI1 epithelial stromal interaction 1 (breast)
ERICH1 glutamate-rich 1
ETV7 ets variant 7
EXOSC7 exosome component 7
FAM104A family with sequence similarity 104, member A
FAM167A-AS1 FAM167A antisense RNA 1
FAM195B family with sequence similarity 195, member B
FAM96B family with sequence similarity 96, member B
FBXL15 F-box and leucine-rich repeat protein 15
FBXL8 F-box and leucine-rich repeat protein 8
FBXO17 F-box protein 17
FGF17 fibroblast growth factor 17
FN3K fructosamine 3 kinase
FOXH1 forkhead box H1
FXYD5 FXYD domain containing ion transport regulator 5
FXYD7 FXYD domain containing ion transport regulator 7
GIPC1 GIPC PDZ domain containing family, member 1
GLIPR2 GLI pathogenesis-related 2
GPBAR1 G protein-coupled bile acid receptor 1
GPHN gephyrin
GPR119 G protein-coupled receptor 119
GPR180 G protein-coupled receptor 180
GRIN3B glutamate receptor, ionotropic, N-methyl-D-aspartate 3B
GSDMD gasdermin D
GTF2H5 general transcription factor IIH, polypeptide 5
GTF3C6 general transcription factor IIIC, polypeptide 6, alpha 35kDa
H3F3B H3 histone, family 3B (H3.3B)
HAGHL hydroxyacylglutathione hydrolase-like
HAR1A highly accelerated region 1A (non-protein coding)
HBQ1 hemoglobin, theta 1
HCN2 hyperpolarization activated cyclic nucleotide gated potassium channel 2
HCRT hypocretin (orexin) neuropeptide precursor
HES4 hes family bHLH transcription factor 4
HEXDC hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing
HIGD2B HIG1 hypoxia inducible domain family, member 2B
HIST1H1E histone cluster 1, H1e
HIST1H2BI histone cluster 1, H2bi
HIST1H3B histone cluster 1, H3b
HIST1H4B histone cluster 1, H4b
HIST1H4C histone cluster 1, H4c
HIST1H4E histone cluster 1, H4e
HIST2H2AB histone cluster 2, H2ab
HIST2H3C histone cluster 2, H3c
HK1 hexokinase 1
HLA-DQB1 major histocompatibility complex, class II, DQ beta 1
HLA-L major histocompatibility complex, class I, L (pseudogene)
HN1 hematological and neurological expressed 1
HOXB4 homeobox B4
HOXC4 homeobox C4
HPS1 Hermansky-Pudlak syndrome 1
ICT1 immature colon carcinoma transcript 1
IDI2-AS1 IDI2 antisense RNA 1
IFI27 interferon, alpha-inducible protein 27
IFI44L interferon-induced protein 44-like
IFITM1 interferon induced transmembrane protein 1
IFITM3 interferon induced transmembrane protein 3
IFNW1 interferon, omega 1
IL12RB1 interleukin 12 receptor, beta 1
ILVBL ilvB (bacterial acetolactate synthase)-like
IRF7 interferon regulatory factor 7
ISG15 ISG15 ubiquitin-like modifier
ITPK1 inositol-tetrakisphosphate 1-kinase
JUND jun D proto-oncogene
LAP3 leucine aminopeptidase 3
LEPROTL1 leptin receptor overlapping transcript-like 1
LGALS3BP lectin, galactoside-binding, soluble, 3 binding protein
LINC00473 long intergenic non-protein coding RNA 473
LINC00515 long intergenic non-protein coding RNA 515
LIPJ lipase, family member J
LOC143666 uncharacterized LOC143666
LOC400043 uncharacterized LOC400043
LOC728554 THO complex 3 pseudogene
LRRC23 leucine rich repeat containing 23
LRRC27 leucine rich repeat containing 27
LRRC45 leucine rich repeat containing 45
LSM1 LSM1, U6 small nuclear RNA associated
LSM7 LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)
LYPD1 LY6/PLAUR domain containing 1
MACROD1 MACRO domain containing 1
MAMDC4 MAM domain containing 4
MAX MYC associated factor X
MCF2L MCF.2 cell line derived transforming sequence-like
MED27 mediator complex subunit 27
METRNL meteorin, glial cell differentiation regulator-like
MRPL12 mitochondrial ribosomal protein L12
MRPL44 mitochondrial ribosomal protein L44
MRPL57 mitochondrial ribosomal protein L57
MRPS34 mitochondrial ribosomal protein S34
MST1 macrophage stimulating 1
MST1L macrophage stimulating 1-like
MST1P2 macrophage stimulating 1 (hepatocyte growth factor-like) pseudogene 2
MTG1 mitochondrial ribosome-associated GTPase 1
MYL5 myosin, light chain 5, regulatory
MYL6B myosin, light chain 6B, alkali, smooth muscle and non-muscle
MZT2A mitotic spindle organizing protein 2A
MZT2B mitotic spindle organizing protein 2B
NAA38 N(alpha)-acetyltransferase 38, NatC auxiliary subunit
NARF nuclear prelamin A recognition factor
NAT14 N-acetyltransferase 14 (GCN5-related, putative)
NDUFAF2 NADH dehydrogenase (ubiquinone) complex I, assembly factor 2
NINJ1 ninjurin 1
NKX2-8 NK2 homeobox 8
NME1 NME/NM23 nucleoside diphosphate kinase 1
NME2 NME/NM23 nucleoside diphosphate kinase 2
NPFF neuropeptide FF-amide peptide precursor
NRBP2 nuclear receptor binding protein 2
NRN1 neuritin 1
NTAN1 N-terminal asparagine amidase
NTNG1 netrin G1
NTNG2 netrin G2
OASL 2'-5'-oligoadenylate synthetase-like
ODF3B outer dense fiber of sperm tails 3B
OPRL1 opiate receptor-like 1
OPTN optineurin
OR1J1 olfactory receptor, family 1, subfamily J, member 1
OR1J2 olfactory receptor, family 1, subfamily J, member 2
OR4K14 olfactory receptor, family 4, subfamily K, member 14
OR51M1 olfactory receptor, family 51, subfamily M, member 1
OR52H1 olfactory receptor, family 52, subfamily H, member 1
OR9Q1 olfactory receptor, family 9, subfamily Q, member 1
OTOF otoferlin
OXLD1 oxidoreductase-like domain containing 1
P2RY11 purinergic receptor P2Y, G-protein coupled, 11
PARP10 poly (ADP-ribose) polymerase family, member 10
PCDHA1 protocadherin alpha 1
PCDHA3 protocadherin alpha 3
PCDHA6 protocadherin alpha 6
PCDHB10 protocadherin beta 10
PCDHB16 protocadherin beta 16
PCDHB17P protocadherin beta 17 pseudogene
PCDHB2 protocadherin beta 2
PCDHB5 protocadherin beta 5
PCDHB8 protocadherin beta 8
PCDHB9 protocadherin beta 9
PCDHGA4 protocadherin gamma subfamily A, 4
PCDHGB8P protocadherin gamma subfamily B, 8 pseudogene
PIH1D2 PIH1 domain containing 2
PLA2G15 phospholipase A2, group XV
PLOD1 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1
PMCHL1 pro-melanin-concentrating hormone-like 1, pseudogene
POLR1D polymerase (RNA) I polypeptide D, 16kDa
POLR2L polymerase (RNA) II (DNA directed) polypeptide L, 7.6kDa
PPA1 pyrophosphatase (inorganic) 1
PPP1R7 protein phosphatase 1, regulatory subunit 7
PPP2CB protein phosphatase 2, catalytic subunit, beta isozyme
PRKY protein kinase, Y-linked, pseudogene
PRR25 proline rich 25
PSKH2 protein serine kinase H2
PSMB10 proteasome (prosome, macropain) subunit, beta type, 10
PSMB7 proteasome (prosome, macropain) subunit, beta type, 7
PSME2 proteasome (prosome, macropain) activator subunit 2 (PA28 beta)
PTCHD4 patched domain containing 4
PTPMT1 protein tyrosine phosphatase, mitochondrial 1
PVT1 Pvt1 oncogene (non-protein coding)
RAC3 ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3)
RAP1GAP RAP1 GTPase activating protein
RARRES3 retinoic acid receptor responder (tazarotene induced) 3
REXO1L1P REX1, RNA exonuclease 1 homolog (S. cerevisiae)-like 1, pseudogene
RHBDF2 rhomboid 5 homolog 2 (Drosophila)
RMRP RNA component of mitochondrial RNA processing endoribonuclease
RNF43 ring finger protein 43
RPPH1 ribonuclease P RNA component H1
RPS26 ribosomal protein S26
RPS27L ribosomal protein S27-like
RTP4 receptor (chemosensory) transporter protein 4
S100A10 S100 calcium binding protein A10
SAP30BP SAP30 binding protein
SCARNA10 small Cajal body-specific RNA 10
SCARNA12 small Cajal body-specific RNA 12
SCARNA14 small Cajal body-specific RNA 14
SCARNA16 small Cajal body-specific RNA 16
SCARNA2 small Cajal body-specific RNA 2
SCARNA21 small Cajal body-specific RNA 21
SCARNA6 small Cajal body-specific RNA 6
SCARNA7 small Cajal body-specific RNA 7
SCARNA9 small Cajal body-specific RNA 9
SEBOX SEBOX homeobox
SECTM1 secreted and transmembrane 1
SFXN3 sideroflexin 3
SGCD sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)
SH3GL2 SH3-domain GRB2-like 2
SLC15A3 solute carrier family 15 (oligopeptide transporter), member 3
SLC15A4 solute carrier family 15 (oligopeptide transporter), member 4
SLC35G5 solute carrier family 35, member G5
SMIM19 small integral membrane protein 19
SNORA1 small nucleolar RNA, H/ACA box 1
SNORA10 small nucleolar RNA, H/ACA box 10
SNORA12 small nucleolar RNA, H/ACA box 12
SNORA14B small nucleolar RNA, H/ACA box 14B
SNORA16A small nucleolar RNA, H/ACA box 16A
SNORA22 small nucleolar RNA, H/ACA box 22
SNORA24 small nucleolar RNA, H/ACA box 24
SNORA31 small nucleolar RNA, H/ACA box 31
SNORA32 small nucleolar RNA, H/ACA box 32
SNORA34 small nucleolar RNA, H/ACA box 34
SNORA38B small nucleolar RNA, H/ACA box 38B
SNORA45B small nucleolar RNA, H/ACA box 45B
SNORA48 small nucleolar RNA, H/ACA box 48
SNORA49 small nucleolar RNA, H/ACA box 49
SNORA53 small nucleolar RNA, H/ACA box 53
SNORA55 small nucleolar RNA, H/ACA box 55
SNORA57 small nucleolar RNA, H/ACA box 57
SNORA5A small nucleolar RNA, H/ACA box 5A
SNORA6 small nucleolar RNA, H/ACA box 6
SNORA63 small nucleolar RNA, H/ACA box 63
SNORA67 small nucleolar RNA, H/ACA box 67
SNORA68 small nucleolar RNA, H/ACA box 68
SNORA71A small nucleolar RNA, H/ACA box 71A
SNORA71C small nucleolar RNA, H/ACA box 71C
SNORA71D small nucleolar RNA, H/ACA box 71D
SNORA74B small nucleolar RNA, H/ACA box 74B
SNORA76C small nucleolar RNA, H/ACA box 76C
SNORA78 small nucleolar RNA, H/ACA box 78
SNORA84 small nucleolar RNA, H/ACA box 84
SNORD10 small nucleolar RNA, C/D box 10
SNORD15A small nucleolar RNA, C/D box 15A
SNORD15B small nucleolar RNA, C/D box 15B
SNORD17 small nucleolar RNA, C/D box 17
SNORD22 small nucleolar RNA, C/D box 22
SNORD94 small nucleolar RNA, C/D box 94
SNORD97 small nucleolar RNA, C/D box 97
SPAG7 sperm associated antigen 7
SPTSSA serine palmitoyltransferase, small subunit A
SSBP4 single stranded DNA binding protein 4
SSTR2 somatostatin receptor 2
STRA13 stimulated by retinoic acid 13
STUB1 STIP1 homology and U-box containing protein 1, E3 ubiquitin protein ligase
STXBP1 syntaxin binding protein 1
SUGT1P1 SUGT1 pseudogene 1
SUMO2 small ubiquitin-like modifier 2
TAS2R60 taste receptor, type 2, member 60
TBC1D3F TBC1 domain family, member 3F
TBX2 T-box 2
TCEA2 transcription elongation factor A (SII), 2
TERC telomerase RNA component
TGM4 transglutaminase 4
THOC3 THO complex 3
TIMM8B translocase of inner mitochondrial membrane 8 homolog B (yeast)
TMED1 transmembrane emp24 protein transport domain containing 1
TMED6 transmembrane emp24 protein transport domain containing 6
TMEM249 transmembrane protein 249
TMEM261 transmembrane protein 261
TMEM62 transmembrane protein 62
TMEM80 transmembrane protein 80
TPI1P3 triosephosphate isomerase 1 pseudogene 3
TPRN taperin
TRIB2 tribbles pseudokinase 2
TRIM22 tripartite motif containing 22
TRIM69 tripartite motif containing 69
TRIM74 tripartite motif containing 74
TSPAN4 tetraspanin 4
UBE2L6 ubiquitin-conjugating enzyme E2L 6
UCN urocortin
USP18 ubiquitin specific peptidase 18
VIL1 villin 1
VMP1 vacuole membrane protein 1
WNT10B wingless-type MMTV integration site family, member 10B
ZFYVE21 zinc finger, FYVE domain containing 21
ZMYND15 zinc finger, MYND-type containing 15
ZNF688 zinc finger protein 688
ZNF837 zinc finger protein 837
ZSWIM7 zinc finger, SWIM-type containing 7

low expression

Symbol Name
CPNE3 copine III
EPM2AIP1 EPM2A (laforin) interacting protein 1
EXO5 exonuclease 5
LCMT2 leucine carboxyl methyltransferase 2
MLH1 mutL homolog 1
N6AMT2 N-6 adenine-specific DNA methyltransferase 2 (putative)
NUDT16 nudix (nucleoside diphosphate linked moiety X)-type motif 16
PBDC1 polysaccharide biosynthesis domain containing 1
SMIM15 small integral membrane protein 15
ZNF234 zinc finger protein 234