Skin Cutaneous Melanoma_SKCM_TCGA-BF-A5EQ-01A-21R-A27Q-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Skin Cutaneous Melanoma_SKCM (The Cancer Genome Atlas)
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243 genes with high or low expression in Skin Cutaneous Melanoma_SKCM_TCGA-BF-A5EQ-01A-21R-A27Q-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ACO2 aconitase 2, mitochondrial
AHDC1 AT hook, DNA binding motif, containing 1
AK2 adenylate kinase 2
ANKRD54 ankyrin repeat domain 54
ARFGAP3 ADP-ribosylation factor GTPase activating protein 3
ARHGEF9 Cdc42 guanine nucleotide exchange factor (GEF) 9
ARSB arylsulfatase B
ATG10 autophagy related 10
ATP6AP1L ATPase, H+ transporting, lysosomal accessory protein 1-like
ATXN7L1 ataxin 7-like 1
B4GALT7 xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7
BCL2L13 BCL2-like 13 (apoptosis facilitator)
BIK BCL2-interacting killer (apoptosis-inducing)
BRD8 bromodomain containing 8
C10ORF120 chromosome 10 open reading frame 120
C17ORF74 chromosome 17 open reading frame 74
C1ORF101 chromosome 1 open reading frame 101
C1ORF198 chromosome 1 open reading frame 198
C22ORF46 chromosome 22 open reading frame 46
C5ORF60 chromosome 5 open reading frame 60
C9ORF173 chromosome 9 open reading frame 173
CABS1 calcium-binding protein, spermatid-specific 1
CAMKMT calmodulin-lysine N-methyltransferase
CAV1 caveolin 1, caveolae protein, 22kDa
CAV2 caveolin 2
CBLN1 cerebellin 1 precursor
CBWD2 COBW domain containing 2
CCDC116 coiled-coil domain containing 116
CCDC134 coiled-coil domain containing 134
CDC23 cell division cycle 23
CDHR3 cadherin-related family member 3
CECR7 cat eye syndrome chromosome region, candidate 7 (non-protein coding)
CHRDL2 chordin-like 2
CHSY1 chondroitin sulfate synthase 1
CLDN9 claudin 9
CLTB clathrin, light chain B
CNOT6 CCR4-NOT transcription complex, subunit 6
COL6A5 collagen, type VI, alpha 5
COX6B2 cytochrome c oxidase subunit VIb polypeptide 2 (testis)
CPQ carboxypeptidase Q
CRKL v-crk avian sarcoma virus CT10 oncogene homolog-like
CRTAC1 cartilage acidic protein 1
CRYM-AS1 CRYM antisense RNA 1
CXORF57 chromosome X open reading frame 57
CYB5R3 cytochrome b5 reductase 3
CYP2D7 cytochrome P450, family 2, subfamily D, polypeptide 7 (gene/pseudogene)
DBN1 drebrin 1
DDX11L2 DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11 like 2
DDX41 DEAD (Asp-Glu-Ala-Asp) box polypeptide 41
DGCR6L DiGeorge syndrome critical region gene 6-like
DHFR dihydrofolate reductase
DIO2 deiodinase, iodothyronine, type II
DPRXP4 divergent-paired related homeobox pseudogene 4
DUSP22 dual specificity phosphatase 22
EEF2KMT eukaryotic elongation factor 2 lysine methyltransferase
EFNB3 ephrin-B3
ETF1 eukaryotic translation termination factor 1
FAF2 Fas associated factor family member 2
FAM109B family with sequence similarity 109, member B
FAM110D family with sequence similarity 110, member D
FAM13B family with sequence similarity 13, member B
FAM193B family with sequence similarity 193, member B
FAM219B family with sequence similarity 219, member B
FAM32A family with sequence similarity 32, member A
FAM53A family with sequence similarity 53, member A
FAM53C family with sequence similarity 53, member C
FAM89A family with sequence similarity 89, member A
FDXACB1 ferredoxin-fold anticodon binding domain containing 1
FGF6 fibroblast growth factor 6
FRMPD2B FERM and PDZ domain containing 2B, pseudogene
FRZB frizzled-related protein
FSTL5 follistatin-like 5
GAL3ST4 galactose-3-O-sulfotransferase 4
GK glycerol kinase
GLI1 GLI family zinc finger 1
GLYR1 glyoxylate reductase 1 homolog (Arabidopsis)
GPRIN1 G protein regulated inducer of neurite outgrowth 1
GRK6 G protein-coupled receptor kinase 6
GTDC1 glycosyltransferase-like domain containing 1
GTF2H2B general transcription factor IIH, polypeptide 2B (pseudogene)
GTF2IRD2 GTF2I repeat domain containing 2
HCFC1R1 host cell factor C1 regulator 1 (XPO1 dependent)
HIC2 hypermethylated in cancer 2
HIGD2A HIG1 hypoxia inducible domain family, member 2A
HNRNPA0 heterogeneous nuclear ribonucleoprotein A0
HNRNPAB heterogeneous nuclear ribonucleoprotein A/B
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H)
HPS4 Hermansky-Pudlak syndrome 4
HSPA9 heat shock 70kDa protein 9 (mortalin)
IGF1R insulin-like growth factor 1 receptor
IGFALS insulin-like growth factor binding protein, acid labile subunit
IL12RB2 interleukin 12 receptor, beta 2
INSL5 insulin-like 5
JAKMIP3 Janus kinase and microtubule interacting protein 3
KBTBD13 kelch repeat and BTB (POZ) domain containing 13
KCNK17 potassium channel, two pore domain subfamily K, member 17
KDM3B lysine (K)-specific demethylase 3B
KIAA1045 KIAA1045
KIAA1191 KIAA1191
KIAA1456 KIAA1456
KLHL22 kelch-like family member 22
L3MBTL2 l(3)mbt-like 2 (Drosophila)
LHX5 LIM homeobox 5
LINGO2 leucine rich repeat and Ig domain containing 2
LMCD1 LIM and cysteine-rich domains 1
LOC388955 PRELI domain-containing protein 1, mitochondrial pseudogene
LOC494141 solute carrier family 25, member 51 pseudogene
LOC647859 occludin pseudogene
LRCH4 leucine-rich repeats and calponin homology (CH) domain containing 4
LYPD4 LY6/PLAUR domain containing 4
LZTR1 leucine-zipper-like transcription regulator 1
MAPK1 mitogen-activated protein kinase 1
MAPK9 mitogen-activated protein kinase 9
MARCH3 membrane-associated ring finger (C3HC4) 3, E3 ubiquitin protein ligase
MCAT malonyl CoA:ACP acyltransferase (mitochondrial)
MED15 mediator complex subunit 15
MICAL3 microtubule associated monooxygenase, calponin and LIM domain containing 3
MIMT1 MER1 repeat containing imprinted transcript 1 (non-protein coding)
MOSPD1 motile sperm domain containing 1
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like
MUM1 melanoma associated antigen (mutated) 1
NAA60 N(alpha)-acetyltransferase 60, NatF catalytic subunit
NAGA N-acetylgalactosaminidase, alpha-
NAPG N-ethylmaleimide-sensitive factor attachment protein, gamma
NCAPH2 non-SMC condensin II complex, subunit H2
NDUFA6 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa
NGB neuroglobin
NGRN neugrin, neurite outgrowth associated
NHP2 NHP2 ribonucleoprotein
NME5 NME/NM23 family member 5
NOP16 NOP16 nucleolar protein
NPHS2 nephrosis 2, idiopathic, steroid-resistant (podocin)
NPL N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)
NRCAM neuronal cell adhesion molecule
OIT3 oncoprotein induced transcript 3
OR2T27 olfactory receptor, family 2, subfamily T, member 27
OR4K15 olfactory receptor, family 4, subfamily K, member 15
OR7C2 olfactory receptor, family 7, subfamily C, member 2
OR7D4 olfactory receptor, family 7, subfamily D, member 4
OR7G1 olfactory receptor, family 7, subfamily G, member 1
OR8D4 olfactory receptor, family 8, subfamily D, member 4
P2RX6 purinergic receptor P2X, ligand gated ion channel, 6
PACSIN2 protein kinase C and casein kinase substrate in neurons 2
PAPD4 PAP associated domain containing 4
PAX1 paired box 1
PCDHGA10 protocadherin gamma subfamily A, 10
PDE6D phosphodiesterase 6D, cGMP-specific, rod, delta
PDLIM7 PDZ and LIM domain 7 (enigma)
PDZRN3 PDZ domain containing ring finger 3
PEG3 paternally expressed 3
PHAX phosphorylated adaptor for RNA export
PHF5A PHD finger protein 5A
PI4KAP1 phosphatidylinositol 4-kinase, catalytic, alpha pseudogene 1
PIGF phosphatidylinositol glycan anchor biosynthesis, class F
PMCHL2 pro-melanin-concentrating hormone-like 2, pseudogene
PMM1 phosphomannomutase 1
PMS2P5 postmeiotic segregation increased 2 pseudogene 5
POLDIP3 polymerase (DNA-directed), delta interacting protein 3
POLR3H polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)
POMZP3 POM121 and ZP3 fusion
PPIL2 peptidylprolyl isomerase (cyclophilin)-like 2
PPM1F protein phosphatase, Mg2+/Mn2+ dependent, 1F
PPP6R2 protein phosphatase 6, regulatory subunit 2
PRDM14 PR domain containing 14
PRDM4 PR domain containing 4
PRELID1 PRELI domain containing 1
PRELP proline/arginine-rich end leucine-rich repeat protein
PRRC1 proline-rich coiled-coil 1
RAB24 RAB24, member RAS oncogene family
RAPH1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1
RAX retina and anterior neural fold homeobox
RBX1 ring-box 1, E3 ubiquitin protein ligase
RHBDF1 rhomboid 5 homolog 1 (Drosophila)
RNASE11 ribonuclease, RNase A family, 11 (non-active)
RNF32 ring finger protein 32
RNF44 ring finger protein 44
RRP7A ribosomal RNA processing 7 homolog A (S. cerevisiae)
RRP7BP ribosomal RNA processing 7 homolog B (S. cerevisiae), pseudogene
SBF1 SET binding factor 1
SCARF2 scavenger receptor class F, member 2
SDF2L1 stromal cell-derived factor 2-like 1
SEPT3 septin 3
SERHL serine hydrolase-like (pseudogene)
SETMAR SET domain and mariner transposase fusion gene
SGK223 homolog of rat pragma of Rnd2
SGTB small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta
SLC17A1 solute carrier family 17 (organic anion transporter), member 1
SLC1A6 solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6
SLC25A17 solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17
SLC32A1 solute carrier family 32 (GABA vesicular transporter), member 1
SMDT1 single-pass membrane protein with aspartate-rich tail 1
SNAP29 synaptosomal-associated protein, 29kDa
SNCA synuclein, alpha (non A4 component of amyloid precursor)
SNORA21 small nucleolar RNA, H/ACA box 21
SNX32 sorting nexin 32
SPDYE3 speedy/RINGO cell cycle regulator family member E3
SPHAR S-phase response (cyclin related)
SRY sex determining region Y
ST13 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)
ST6GALNAC2 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2
TANGO2 transport and golgi organization 2 homolog (Drosophila)
TBC1D28 TBC1 domain family, member 28
TBC1D9B TBC1 domain family, member 9B (with GRAM domain)
TCF20 transcription factor 20 (AR1)
TEF thyrotrophic embryonic factor
TELO2 telomere maintenance 2
THAP7 THAP domain containing 7
TLE1 transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila)
TMED9 transmembrane emp24 protein transport domain containing 9
TMEM168 transmembrane protein 168
TMEM191A transmembrane protein 191A (pseudogene)
TOB2 transducer of ERBB2, 2
TP53TG1 TP53 target 1 (non-protein coding)
TP73-AS1 TP73 antisense RNA 1
TSPAN17 tetraspanin 17
TSPO translocator protein (18kDa)
TTLL1 tubulin tyrosine ligase-like family member 1
TTLL12 tubulin tyrosine ligase-like family member 12
TTTY18 testis-specific transcript, Y-linked 18 (non-protein coding)
TTTY2 testis-specific transcript, Y-linked 2 (non-protein coding)
UBE2L3 ubiquitin-conjugating enzyme E2L 3
UIMC1 ubiquitin interaction motif containing 1
WBP2NL WBP2 N-terminal like
WDR41 WD repeat domain 41
WDR61 WD repeat domain 61
WDR63 WD repeat domain 63
WDTC1 WD and tetratricopeptide repeats 1
WFIKKN1 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1
WNT8A wingless-type MMTV integration site family, member 8A
XPNPEP3 X-prolyl aminopeptidase 3, mitochondrial
XRCC6 X-ray repair complementing defective repair in Chinese hamster cells 6
YDJC YdjC homolog (bacterial)
YPEL1 yippee-like 1 (Drosophila)
ZC3H7B zinc finger CCCH-type containing 7B
ZCCHC9 zinc finger, CCHC domain containing 9
ZFP2 ZFP2 zinc finger protein
ZIM2 zinc finger, imprinted 2
ZNF346 zinc finger protein 346
ZNF74 zinc finger protein 74
ZNF790 zinc finger protein 790
ZSCAN21 zinc finger and SCAN domain containing 21
ZSCAN32 zinc finger and SCAN domain containing 32

low expression

Symbol Name
TMLHE trimethyllysine hydroxylase, epsilon