RPMI 2650 Gene Set

Dataset Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles
Category genomics
Type cell line
Description Human nasal septum squamous cell carinoma cell line; established from the pleural effusion of a 52-year-old man with anaplastic squamous cell carcinoma of the nasal septum in 1962. (BRENDA Tissue and Enzyme Source Ontology, BTO_0004205)
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Genes

71 genes mutated in the RPMI 2650 cell line from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles dataset.

Symbol Name
AKIRIN1 akirin 1
ANKRD44 ankyrin repeat domain 44
ANOS1 anosmin 1
APC adenomatous polyposis coli
ARHGEF7 Rho guanine nucleotide exchange factor (GEF) 7
ARSD arylsulfatase D
ATF5 activating transcription factor 5
ATP6V0A1 ATPase, H+ transporting, lysosomal V0 subunit a1
CAPRIN1 cell cycle associated protein 1
CCDC159 coiled-coil domain containing 159
CDH22 cadherin 22, type 2
CLSTN3 calsyntenin 3
CLTA clathrin, light chain A
DNAJC10 DnaJ (Hsp40) homolog, subfamily C, member 10
DOK3 docking protein 3
DPP8 dipeptidyl-peptidase 8
EFCAB3 EF-hand calcium binding domain 3
EIF3CL eukaryotic translation initiation factor 3, subunit C-like
ESYT2 extended synaptotagmin-like protein 2
EVC2 Ellis van Creveld syndrome 2
EXOC4 exocyst complex component 4
FAM69B family with sequence similarity 69, member B
GSDMB gasdermin B
IFIT1B interferon-induced protein with tetratricopeptide repeats 1B
IPO5 importin 5
KIF13B kinesin family member 13B
KIF4B kinesin family member 4B
KRT75 keratin 75, type II
LOC388849 uncharacterized LOC388849
LRIG1 leucine-rich repeats and immunoglobulin-like domains 1
MALT1 MALT1 paracaspase
MARVELD1 MARVEL domain containing 1
MED19 mediator complex subunit 19
MORN1 MORN repeat containing 1
MROH1 maestro heat-like repeat family member 1
NBEAL2 neurobeachin-like 2
NFRKB nuclear factor related to kappaB binding protein
NUP153 nucleoporin 153kDa
PCDHGA9 protocadherin gamma subfamily A, 9
PGM1 phosphoglucomutase 1
PLA2G4F phospholipase A2, group IVF
PML promyelocytic leukemia
PRDM10 PR domain containing 10
PRPF40B PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)
PRRC2C proline-rich coiled-coil 2C
RARRES1 retinoic acid receptor responder (tazarotene induced) 1
RDH12 retinol dehydrogenase 12 (all-trans/9-cis/11-cis)
RHOBTB2 Rho-related BTB domain containing 2
RNF123 ring finger protein 123
RPUSD3 RNA pseudouridylate synthase domain containing 3
RTTN rotatin
SELV selenoprotein V
SEMA3F sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F
SLC44A1 solute carrier family 44 (choline transporter), member 1
SMG5 SMG5 nonsense mediated mRNA decay factor
SRBD1 S1 RNA binding domain 1
SREBF2 sterol regulatory element binding transcription factor 2
STARD9 StAR-related lipid transfer (START) domain containing 9
STK11 serine/threonine kinase 11
SUGP2 SURP and G patch domain containing 2
SUZ12 SUZ12 polycomb repressive complex 2 subunit
TBC1D16 TBC1 domain family, member 16
TNRC6B trinucleotide repeat containing 6B
TSHZ1 teashirt zinc finger homeobox 1
TTN titin
USP48 ubiquitin specific peptidase 48
VPS39 vacuolar protein sorting 39 homolog (S. cerevisiae)
WFS1 Wolfram syndrome 1 (wolframin)
ZFY zinc finger protein, Y-linked
ZNF280A zinc finger protein 280A
ZNF77 zinc finger protein 77