Parabrachial nucleus Gene Set

Dataset Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles
Category transcriptomics
Type tissue
Description A nucleus of the parabrachial area, which in the human brain is a horseshoe-shaped strip of gray matter comprising the K├Âlliker-Fuse nucleus, the lateral parabrachial nucleus and the medial parabrachial nucleus. (Uber Anatomy Ontology, UBERON_0007634)
Similar Terms
Downloads & Tools

Genes

299 genes with high or low expression in Parabrachial nucleus relative to other tissues from the Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles dataset.

high expression

Symbol Name Standardized Value
FEN1 flap structure-specific endonuclease 1 2.09455
ITGA8 integrin, alpha 8 2.06425
IL12A interleukin 12A 2.02009
H2BFM H2B histone family, member M 2.01489
TAMM41 TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae) 1.86943
RPGRIP1L RPGRIP1-like 1.80205
CRYGB crystallin, gamma B 1.7022
LILRB4 leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4 1.69126
ME1 malic enzyme 1, NADP(+)-dependent, cytosolic 1.68186
ZCCHC4 zinc finger, CCHC domain containing 4 1.66416
METTL16 methyltransferase like 16 1.60054
SIMC1 SUMO-interacting motifs containing 1 1.58961
SLC6A2 solute carrier family 6 (neurotransmitter transporter), member 2 1.57956
PPAPDC1A phosphatidic acid phosphatase type 2 domain containing 1A 1.57895
BTNL9 butyrophilin-like 9 1.55499
STBD1 starch binding domain 1 1.552
NDUFA4L2 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2 1.53223
S100A13 S100 calcium binding protein A13 1.514
SPX spexin hormone 1.47333
PHF1 PHD finger protein 1 1.47256
MAOA monoamine oxidase A 1.45816
DNTTIP1 deoxynucleotidyltransferase, terminal, interacting protein 1 1.43944
AMIGO3 adhesion molecule with Ig-like domain 3 1.43713
CERS1 ceramide synthase 1 1.43692
FIGNL1 fidgetin-like 1 1.43238
SPATS1 spermatogenesis associated, serine-rich 1 1.42813
FTO fat mass and obesity associated 1.42626
C3ORF14 chromosome 3 open reading frame 14 1.42165
EPB41L4A erythrocyte membrane protein band 4.1 like 4A 1.41883
C1ORF112 chromosome 1 open reading frame 112 1.38123
RPS4Y1 ribosomal protein S4, Y-linked 1 1.37674
OAS2 2'-5'-oligoadenylate synthetase 2, 69/71kDa 1.37674
LPCAT2 lysophosphatidylcholine acyltransferase 2 1.35924
CRYGN crystallin, gamma N 1.35814
RAC3 ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3) 1.34534
DRD5 dopamine receptor D5 1.34205
SCRT2 scratch family zinc finger 2 1.34107
SMAD9 SMAD family member 9 1.32273
RWDD1 RWD domain containing 1 1.31698
LRRC24 leucine rich repeat containing 24 1.31446
APOH apolipoprotein H (beta-2-glycoprotein I) 1.31229
SPAG11B sperm associated antigen 11B 1.31201
KLK10 kallikrein-related peptidase 10 1.30177
SCGB3A1 secretoglobin, family 3A, member 1 1.3001
SPDEF SAM pointed domain containing ETS transcription factor 1.29922
RPS20 ribosomal protein S20 1.29238
PEG3 paternally expressed 3 1.29086
IRX4 iroquois homeobox 4 1.28966
RPS18 ribosomal protein S18 1.28859
HMGCLL1 3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1 1.27883
S100A9 S100 calcium binding protein A9 1.27609
CCT8L2 chaperonin containing TCP1, subunit 8 (theta)-like 2 1.2647
CREBRF CREB3 regulatory factor 1.26404
KIAA1033 KIAA1033 1.25395
TVP23A trans-golgi network vesicle protein 23 homolog A (S. cerevisiae) 1.25303
WDR54 WD repeat domain 54 1.25011
PARD3B par-3 family cell polarity regulator beta 1.24963
VSX1 visual system homeobox 1 1.24717
GPR39 G protein-coupled receptor 39 1.23583
DCAF15 DDB1 and CUL4 associated factor 15 1.2234
CXXC4 CXXC finger protein 4 1.223
UPP2 uridine phosphorylase 2 1.21534
CENPC centromere protein C 1.21255
POLG2 polymerase (DNA directed), gamma 2, accessory subunit 1.21018
SMARCAL1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 1.20687
WDFY2 WD repeat and FYVE domain containing 2 1.20219
LRRC75B leucine rich repeat containing 75B 1.20106
TMX4 thioredoxin-related transmembrane protein 4 1.19323
KCNK5 potassium channel, two pore domain subfamily K, member 5 1.18872
CYTH4 cytohesin 4 1.18718
UBE2U ubiquitin-conjugating enzyme E2U (putative) 1.18619
ZNF526 zinc finger protein 526 1.18336
HEATR5A HEAT repeat containing 5A 1.17953
PRR14L proline rich 14-like 1.17869
PTOV1 prostate tumor overexpressed 1 1.17184
TMEM86B transmembrane protein 86B 1.16278
ZNF449 zinc finger protein 449 1.16229
PTH parathyroid hormone 1.16227
SARNP SAP domain containing ribonucleoprotein 1.15808
SQSTM1 sequestosome 1 1.14627
WTAP Wilms tumor 1 associated protein 1.14502
C5ORF63 chromosome 5 open reading frame 63 1.14466
PDRG1 p53 and DNA-damage regulated 1 1.14215
GJD3 gap junction protein, delta 3, 31.9kDa 1.13857
HCFC1R1 host cell factor C1 regulator 1 (XPO1 dependent) 1.13111
NEK3 NIMA-related kinase 3 1.12636
SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 16kDa 1.12447
WDR59 WD repeat domain 59 1.12107
MSANTD1 Myb/SANT-like DNA-binding domain containing 1 1.11578
BTBD2 BTB (POZ) domain containing 2 1.11567
FCHSD1 FCH and double SH3 domains 1 1.11477
PRICKLE3 prickle homolog 3 (Drosophila) 1.11463
FAM221B family with sequence similarity 221, member B 1.11169
NQO2 NAD(P)H dehydrogenase, quinone 2 1.11112
NAP1L5 nucleosome assembly protein 1-like 5 1.11008
EIF1AX eukaryotic translation initiation factor 1A, X-linked 1.10981
APLN apelin 1.107
UGT1A6 UDP glucuronosyltransferase 1 family, polypeptide A6 1.10608
PPEF1 protein phosphatase, EF-hand calcium binding domain 1 1.1058
SQLE squalene epoxidase 1.10297
CALCB calcitonin-related polypeptide beta 1.10253
TUFT1 tuftelin 1 1.10019
SETD1A SET domain containing 1A 1.09963
SCAMP1 secretory carrier membrane protein 1 1.09807
SAFB2 scaffold attachment factor B2 1.09759
C8A complement component 8, alpha polypeptide 1.0947
MRPL41 mitochondrial ribosomal protein L41 1.0897
ENPP4 ectonucleotide pyrophosphatase/phosphodiesterase 4 (putative) 1.08625
TSEN15 TSEN15 tRNA splicing endonuclease subunit 1.08162
DBH dopamine beta-hydroxylase (dopamine beta-monooxygenase) 1.07887
PAX5 paired box 5 1.07737
FCHSD2 FCH and double SH3 domains 2 1.07683
STAG2 stromal antigen 2 1.07548
ATP9A ATPase, class II, type 9A 1.07101
AIDA axin interactor, dorsalization associated 1.06925
MMS22L MMS22-like, DNA repair protein 1.06868
BEGAIN brain-enriched guanylate kinase-associated 1.06824
NHEJ1 nonhomologous end-joining factor 1 1.06717
ZCCHC2 zinc finger, CCHC domain containing 2 1.06691
DNM2 dynamin 2 1.06673
ABHD16B abhydrolase domain containing 16B 1.06632
HPSE heparanase 1.06243
USP6NL USP6 N-terminal like 1.05942
CYSRT1 cysteine-rich tail protein 1 1.05893
DDX51 DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 1.05251
FITM2 fat storage-inducing transmembrane protein 2 1.05171
KCNJ1 potassium channel, inwardly rectifying subfamily J, member 1 1.04885
PIM2 Pim-2 proto-oncogene, serine/threonine kinase 1.04735
TMCO6 transmembrane and coiled-coil domains 6 1.04674
TMX3 thioredoxin-related transmembrane protein 3 1.04608
SHFM1 split hand/foot malformation (ectrodactyly) type 1 1.04572
C21ORF2 chromosome 21 open reading frame 2 1.04013
TNKS tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 1.03728
MCOLN3 mucolipin 3 1.03329
C11ORF74 chromosome 11 open reading frame 74 1.03173
EDEM3 ER degradation enhancer, mannosidase alpha-like 3 1.0288
PCGF5 polycomb group ring finger 5 1.02584
NEUROD4 neuronal differentiation 4 1.02475
FBXL2 F-box and leucine-rich repeat protein 2 1.02239
TECTA tectorin alpha 1.0218
SLC29A2 solute carrier family 29 (equilibrative nucleoside transporter), member 2 1.01948
RC3H1 ring finger and CCCH-type domains 1 1.01872
TUFM Tu translation elongation factor, mitochondrial 1.01868
DIAPH1 diaphanous-related formin 1 1.01849
NUP210L nucleoporin 210kDa-like 1.0184
TRIM36 tripartite motif containing 36 1.01581
CFL2 cofilin 2 (muscle) 1.01543
IKBIP IKBKB interacting protein 1.01481
BEST1 bestrophin 1 1.01353
SLC7A7 solute carrier family 7 (amino acid transporter light chain, y+L system), member 7 1.0135
KIAA1429 KIAA1429 1.01337
EPHB1 EPH receptor B1 1.01114
NAE1 NEDD8 activating enzyme E1 subunit 1 1.01023
HIGD1A HIG1 hypoxia inducible domain family, member 1A 1.00547
SUN3 Sad1 and UNC84 domain containing 3 1.00393
C5ORF15 chromosome 5 open reading frame 15 1.00388

low expression

Symbol Name Standardized Value
CLEC4G C-type lectin domain family 4, member G -2.35059
KCNH6 potassium channel, voltage gated eag related subfamily H, member 6 -1.95929
KDM8 lysine (K)-specific demethylase 8 -1.9506
OR4C45 olfactory receptor, family 4, subfamily C, member 45 -1.88072
ACVR1C activin A receptor, type IC -1.81134
C10ORF62 chromosome 10 open reading frame 62 -1.76688
SSPN sarcospan -1.75794
GP6 glycoprotein VI (platelet) -1.74366
CRABP2 cellular retinoic acid binding protein 2 -1.71844
UQCRQ ubiquinol-cytochrome c reductase, complex III subunit VII, 9.5kDa -1.65229
NPM3 nucleophosmin/nucleoplasmin 3 -1.5684
PHF7 PHD finger protein 7 -1.55879
OR56A3 olfactory receptor, family 56, subfamily A, member 3 -1.5534
OR2T8 olfactory receptor, family 2, subfamily T, member 8 -1.50884
TMEM241 transmembrane protein 241 -1.50718
PKP4 plakophilin 4 -1.49821
TGM6 transglutaminase 6 -1.49162
TICAM1 toll-like receptor adaptor molecule 1 -1.47361
LAT2 linker for activation of T cells family, member 2 -1.47124
MAP3K10 mitogen-activated protein kinase kinase kinase 10 -1.47016
PKD1L2 polycystic kidney disease 1-like 2 (gene/pseudogene) -1.4654
ITIH1 inter-alpha-trypsin inhibitor heavy chain 1 -1.4607
CASP8AP2 caspase 8 associated protein 2 -1.44728
TRIP13 thyroid hormone receptor interactor 13 -1.41426
TMEM194A transmembrane protein 194A -1.41001
SHMT1 serine hydroxymethyltransferase 1 (soluble) -1.40339
L3HYPDH L-3-hydroxyproline dehydratase (trans-) -1.40008
TNFAIP2 tumor necrosis factor, alpha-induced protein 2 -1.39715
RNF2 ring finger protein 2 -1.39412
FAM45A family with sequence similarity 45, member A -1.39412
MFSD2B major facilitator superfamily domain containing 2B -1.39109
WDR86 WD repeat domain 86 -1.3906
ACOT8 acyl-CoA thioesterase 8 -1.38433
AP5M1 adaptor-related protein complex 5, mu 1 subunit -1.37707
CNGA1 cyclic nucleotide gated channel alpha 1 -1.37354
TOR4A torsin family 4, member A -1.36896
C3ORF52 chromosome 3 open reading frame 52 -1.36888
TIMM22 translocase of inner mitochondrial membrane 22 homolog (yeast) -1.36175
VKORC1 vitamin K epoxide reductase complex, subunit 1 -1.36119
CCT6B chaperonin containing TCP1, subunit 6B (zeta 2) -1.36035
TWF2 twinfilin actin binding protein 2 -1.34461
MKRN1 makorin ring finger protein 1 -1.3439
ATAD2 ATPase family, AAA domain containing 2 -1.33848
ZC3H12B zinc finger CCCH-type containing 12B -1.33439
VANGL1 VANGL planar cell polarity protein 1 -1.33029
SLC25A32 solute carrier family 25 (mitochondrial folate carrier), member 32 -1.32905
OR2T6 olfactory receptor, family 2, subfamily T, member 6 -1.32793
REC114 REC114 meiotic recombination protein -1.31784
KDF1 keratinocyte differentiation factor 1 -1.31781
OR8D4 olfactory receptor, family 8, subfamily D, member 4 -1.31662
TNFSF18 tumor necrosis factor (ligand) superfamily, member 18 -1.3155
OR1L6 olfactory receptor, family 1, subfamily L, member 6 -1.3064
RIOK1 RIO kinase 1 -1.30502
MAGT1 magnesium transporter 1 -1.29221
FJX1 four jointed box 1 (Drosophila) -1.28103
IL34 interleukin 34 -1.2753
ALPI alkaline phosphatase, intestinal -1.27226
GEMIN5 gem (nuclear organelle) associated protein 5 -1.26508
IFI35 interferon-induced protein 35 -1.25046
POU4F3 POU class 4 homeobox 3 -1.24837
SECTM1 secreted and transmembrane 1 -1.24634
PRPS1L1 phosphoribosyl pyrophosphate synthetase 1-like 1 -1.24568
GNGT1 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 -1.24559
ULBP1 UL16 binding protein 1 -1.24504
CD46 CD46 molecule, complement regulatory protein -1.24489
VPS54 vacuolar protein sorting 54 homolog (S. cerevisiae) -1.2392
TEX36 testis expressed 36 -1.23338
MAML3 mastermind-like 3 (Drosophila) -1.21304
SLC4A1 solute carrier family 4 (anion exchanger), member 1 (Diego blood group) -1.21101
MUSK muscle, skeletal, receptor tyrosine kinase -1.21081
CNOT8 CCR4-NOT transcription complex, subunit 8 -1.2087
GPX8 glutathione peroxidase 8 (putative) -1.20609
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -1.20413
UGT3A1 UDP glycosyltransferase 3 family, polypeptide A1 -1.20311
PPP1CA protein phosphatase 1, catalytic subunit, alpha isozyme -1.19799
CYP3A5 cytochrome P450, family 3, subfamily A, polypeptide 5 -1.19702
PIGW phosphatidylinositol glycan anchor biosynthesis, class W -1.19233
CCNJ cyclin J -1.19016
FOXG1 forkhead box G1 -1.18995
CEP112 centrosomal protein 112kDa -1.18241
RAD51AP1 RAD51 associated protein 1 -1.18041
C1D C1D nuclear receptor corepressor -1.17715
MYOM3 myomesin 3 -1.16151
PRRX1 paired related homeobox 1 -1.15561
PPEF2 protein phosphatase, EF-hand calcium binding domain 2 -1.15526
MED7 mediator complex subunit 7 -1.14896
TMEM160 transmembrane protein 160 -1.14046
ERCC8 excision repair cross-complementation group 8 -1.13592
SPIC Spi-C transcription factor (Spi-1/PU.1 related) -1.13335
SEC16A SEC16 homolog A (S. cerevisiae) -1.13047
TMEM119 transmembrane protein 119 -1.1267
ANO2 anoctamin 2, calcium activated chloride channel -1.12589
PPAP2C phosphatidic acid phosphatase type 2C -1.11691
NDC80 NDC80 kinetochore complex component -1.11608
HACD4 3-hydroxyacyl-CoA dehydratase 4 -1.11193
MPZL3 myelin protein zero-like 3 -1.11131
ARL15 ADP-ribosylation factor-like 15 -1.10728
C10ORF11 chromosome 10 open reading frame 11 -1.10663
TMEM38A transmembrane protein 38A -1.10227
WIPF1 WAS/WASL interacting protein family, member 1 -1.10103
TRAM2 translocation associated membrane protein 2 -1.08744
TMED6 transmembrane emp24 protein transport domain containing 6 -1.08612
PLEK pleckstrin -1.0801
WBSCR16 Williams-Beuren syndrome chromosome region 16 -1.07741
TRIB3 tribbles pseudokinase 3 -1.07727
NRARP NOTCH-regulated ankyrin repeat protein -1.07683
TNFAIP8L1 tumor necrosis factor, alpha-induced protein 8-like 1 -1.07642
CABP2 calcium binding protein 2 -1.07539
BNIP2 BCL2/adenovirus E1B 19kDa interacting protein 2 -1.07333
TTC26 tetratricopeptide repeat domain 26 -1.0646
USB1 U6 snRNA biogenesis 1 -1.06348
CCDC79 coiled-coil domain containing 79 -1.06305
SURF6 surfeit 6 -1.05994
ODF3L1 outer dense fiber of sperm tails 3-like 1 -1.05526
HDGFRP2 hepatoma-derived growth factor-related protein 2 -1.05434
HAO2 hydroxyacid oxidase 2 (long chain) -1.05118
IL13RA1 interleukin 13 receptor, alpha 1 -1.05109
SEC63 SEC63 homolog (S. cerevisiae) -1.04802
C14ORF39 chromosome 14 open reading frame 39 -1.04505
RPP21 ribonuclease P/MRP 21kDa subunit -1.04463
TEX28 testis expressed 28 -1.0412
OR6A2 olfactory receptor, family 6, subfamily A, member 2 -1.04045
RAG1 recombination activating gene 1 -1.03999
TRAK2 trafficking protein, kinesin binding 2 -1.03565
CFAP74 cilia and flagella associated protein 74 -1.03486
ITGAM integrin, alpha M (complement component 3 receptor 3 subunit) -1.03332
IRF4 interferon regulatory factor 4 -1.0328
RFC4 replication factor C (activator 1) 4, 37kDa -1.03096
TAS2R40 taste receptor, type 2, member 40 -1.03088
LOC101929327 -1.03088
MYL12B myosin, light chain 12B, regulatory -1.02715
CD19 CD19 molecule -1.02691
NT5E 5'-nucleotidase, ecto (CD73) -1.02557
CCDC23 coiled-coil domain containing 23 -1.0228
PLAC1 placenta-specific 1 -1.02212
LPAR5 lysophosphatidic acid receptor 5 -1.02175
RAMP2 receptor (G protein-coupled) activity modifying protein 2 -1.02101
NAA16 N(alpha)-acetyltransferase 16, NatA auxiliary subunit -1.01876
SPAG16 sperm associated antigen 16 -1.01812
HIST4H4 histone cluster 4, H4 -1.01638
SCUBE3 signal peptide, CUB domain, EGF-like 3 -1.01234
TREM1 triggering receptor expressed on myeloid cells 1 -1.007
MIXL1 Mix paired-like homeobox -1.00348