Metabolite levels Gene Set

Dataset GWAS Catalog SNP-Phenotype Associations
Category disease or phenotype associations
Type phenotype
Description The quantification of some metabolite.|This is an annotation class for metabolite measurements where the exact metabolite measurements are unknown. Do not annotate to this class. (Experimental Factor Ontology, EFO_0004725)
External Link https://www.ebi.ac.uk/gwas/search?query=Metabolite levels
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Genes

57 genes associated with the Metabolite levels phenotype in GWAS datasets from the GWAS Catalog SNP-Phenotype Associations dataset.

Symbol Name Standardized Value
TMEM258 transmembrane protein 258 2.6736
FADS1 fatty acid desaturase 1 2.24844
LOC102724766 uncharacterized LOC102724766 1.90955
ACADS acyl-CoA dehydrogenase, C-2 to C-3 short chain 1.86938
PYROXD2 pyridine nucleotide-disulphide oxidoreductase domain 2 1.83304
HECTD4 HECT domain containing E3 ubiquitin protein ligase 4 1.66084
ACADL acyl-CoA dehydrogenase, long chain 1.64263
CPS1 carbamoyl-phosphate synthase 1, mitochondrial 1.54158
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 1.51909
APOC1 apolipoprotein C-I 1.4482
PNPLA3 patatin-like phospholipase domain containing 3 1.41169
TXNL4B thioredoxin-like 4B 1.37125
SPRYD4 SPRY domain containing 4 1.27794
AQP9 aquaporin 9 1.22654
PPID peptidylprolyl isomerase D 1.15448
CYP4F2 cytochrome P450, family 4, subfamily F, polypeptide 2 1.14658
SLC1A4 solute carrier family 1 (glutamate/neutral amino acid transporter), member 4 1.10796
HMGCR 3-hydroxy-3-methylglutaryl-CoA reductase 1.06007
ZPR1 ZPR1 zinc finger 1.02739
PSRC1 proline/serine-rich coiled-coil 1 1.01293
GCK glucokinase (hexokinase 4) 1.01293
GCKR glucokinase (hexokinase 4) regulator 0.969518
G6PC2 glucose-6-phosphatase, catalytic, 2 0.939467
LOC101929118 0.896275
ABCB11 ATP-binding cassette, sub-family B (MDR/TAP), member 11 0.849268
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit 0.835701
SLCO1B1 solute carrier organic anion transporter family, member 1B1 0.831366
PON1 paraoxonase 1 0.824605
DOCK7 dedicator of cytokinesis 7 0.821909
PHGDH phosphoglycerate dehydrogenase 0.802698
PHF23 PHD finger protein 23 0.793579
SLC14A2 solute carrier family 14 (urea transporter), member 2 0.770629
APOB apolipoprotein B 0.765464
KLKB1 kallikrein B, plasma (Fletcher factor) 1 0.725138
ACE angiotensin I converting enzyme 0.715598
HOGA1 4-hydroxy-2-oxoglutarate aldolase 1 0.713153
LDLR low density lipoprotein receptor 0.696558
TM4SF5 transmembrane 4 L six family member 5 0.656287
ALMS1 Alstrom syndrome protein 1 0.656287
MTNR1B melatonin receptor 1B 0.626595
MYO1E myosin IE 0.592545
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.572839
SLC6A12 solute carrier family 6 (neurotransmitter transporter), member 12 0.572839
GALNT2 polypeptide N-acetylgalactosaminyltransferase 2 0.522843
LOC157273 uncharacterized LOC157273 0.499091
DMGDH dimethylglycine dehydrogenase 0.499091
ANKRD30A ankyrin repeat domain 30A 0.483518
ELOVL2 ELOVL fatty acid elongase 2 0.472799
RSPO3 R-spondin 3 0.434785
PARK2 parkin RBR E3 ubiquitin protein ligase 0.342586
GPC5 glypican 5 0.342586
ATP2B2 ATPase, Ca++ transporting, plasma membrane 2 0.342586
SV2B synaptic vesicle glycoprotein 2B 0.314454
FGF12 fibroblast growth factor 12 0.280662
RBFOX1 RNA binding protein, fox-1 homolog (C. elegans) 1 0.266721
AGXT2 alanine--glyoxylate aminotransferase 2 0.220915
ALDH1L1-AS2 ALDH1L1 antisense RNA 2 0.165905