Melanoma Gene Set

Dataset GWAS Catalog SNP-Phenotype Associations
Category disease or phenotype associations
Type phenotype
Description A cell type cancer that has_material_basis_in abnormally proliferating cells derived_from melanocytes which are found in skin, the bowel and the eye. (Human Disease Ontology, DOID_1909)
External Link https://www.ebi.ac.uk/gwas/search?query=Melanoma
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Genes

18 genes associated with the Melanoma phenotype in GWAS datasets from the GWAS Catalog SNP-Phenotype Associations dataset.

Symbol Name Standardized Value
CDK10 cyclin-dependent kinase 10 1.22654
AFG3L1P AFG3-like AAA ATPase 1, pseudogene 1.09857
PIGU phosphatidylinositol glycan anchor biosynthesis, class U 0.863028
TYR tyrosinase 0.802698
FTO fat mass and obesity associated 0.679413
LOC100996521 uncharacterized LOC100996521 0.595536
ALS2CR12 amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12 0.526478
PLA2G6 phospholipase A2, group VI (cytosolic, calcium-independent) 0.499091
ATM ATM serine/threonine kinase 0.483518
MX2 MX dynamin-like GTPase 2 0.483518
MTAP methylthioadenosine phosphorylase 0.449549
CLPTM1L CLPTM1-like 0.389385
PARP1 poly (ADP-ribose) polymerase 1 0.346786
SLC45A2 solute carrier family 45, member 2 0.314454
TET2 tet methylcytosine dioxygenase 2 0.238523
EYS eyes shut homolog (Drosophila) 0.165905
ANXA9 annexin A9 0.165905
DOCK3 dedicator of cytokinesis 3 0.048624