MDA-MB-330 Gene Set

Dataset Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles
Category genomics
Type cell line
Description disease: carcinoma (mammary gland primary) (Cell Line Ontology, CLO_0007635)
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103 genes mutated in the MDA-MB-330 cell line from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles dataset.

Symbol Name
AGRN agrin
AKAP9 A kinase (PRKA) anchor protein 9
ANK3 ankyrin 3, node of Ranvier (ankyrin G)
ANKFY1 ankyrin repeat and FYVE domain containing 1
AP2A1 adaptor-related protein complex 2, alpha 1 subunit
BCAS3 breast carcinoma amplified sequence 3
BCL9 B-cell CLL/lymphoma 9
BDNF brain-derived neurotrophic factor
BOD1L1 biorientation of chromosomes in cell division 1-like 1
BSG basigin (Ok blood group)
C15ORF65 chromosome 15 open reading frame 65
C1ORF86 chromosome 1 open reading frame 86
C4ORF33 chromosome 4 open reading frame 33
CCZ1B CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)
CDH24 cadherin 24, type 2
CELSR2 cadherin, EGF LAG seven-pass G-type receptor 2
COX14 COX14 cytochrome c oxidase assembly factor
CTDSPL CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa
DEGS2 delta(4)-desaturase, sphingolipid 2
DHRS7B dehydrogenase/reductase (SDR family) member 7B
DPY19L4 dpy-19-like 4 (C. elegans)
DZIP3 DAZ interacting zinc finger protein 3
ENO2 enolase 2 (gamma, neuronal)
EZH1 enhancer of zeste 1 polycomb repressive complex 2 subunit
FAM110B family with sequence similarity 110, member B
FAM76B family with sequence similarity 76, member B
FPR3 formyl peptide receptor 3
GCC1 GRIP and coiled-coil domain containing 1
GCOM1 GRINL1A complex locus 1
GJC3 gap junction protein, gamma 3, 30.2kDa
GLYR1 glyoxylate reductase 1 homolog (Arabidopsis)
GMEB2 glucocorticoid modulatory element binding protein 2
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1
GOLGA4 golgin A4
GSTZ1 glutathione S-transferase zeta 1
HDDC3 HD domain containing 3
HEATR1 HEAT repeat containing 1
HECTD1 HECT domain containing E3 ubiquitin protein ligase 1
HIVEP1 human immunodeficiency virus type I enhancer binding protein 1
IFITM10 interferon induced transmembrane protein 10
IL4R interleukin 4 receptor
INCA1 inhibitor of CDK, cyclin A1 interacting protein 1
INTS12 integrator complex subunit 12
KIAA1161 KIAA1161
KIF4B kinesin family member 4B
LPP LIM domain containing preferred translocation partner in lipoma
LTBP1 latent transforming growth factor beta binding protein 1
MFAP2 microfibrillar-associated protein 2
MIA3 melanoma inhibitory activity family, member 3
MKI67 marker of proliferation Ki-67
MYH9 myosin, heavy chain 9, non-muscle
NBEA neurobeachin
NDUFAF1 NADH dehydrogenase (ubiquinone) complex I, assembly factor 1
NKD2 naked cuticle homolog 2 (Drosophila)
NPC2 Niemann-Pick disease, type C2
NPEPPS aminopeptidase puromycin sensitive
NSD1 nuclear receptor binding SET domain protein 1
PAGE2 P antigen family, member 2 (prostate associated)
PCDHB4 protocadherin beta 4
PDZRN3 PDZ domain containing ring finger 3
PEX10 peroxisomal biogenesis factor 10
PHACTR2 phosphatase and actin regulator 2
PIEZO2 piezo-type mechanosensitive ion channel component 2
PIKFYVE phosphoinositide kinase, FYVE finger containing
PRKCE protein kinase C, epsilon
PTBP1 polypyrimidine tract binding protein 1
PTPN14 protein tyrosine phosphatase, non-receptor type 14
R3HCC1 R3H domain and coiled-coil containing 1
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit
RICTOR RPTOR independent companion of MTOR, complex 2
RPS6KA5 ribosomal protein S6 kinase, 90kDa, polypeptide 5
SART1 squamous cell carcinoma antigen recognized by T cells
SLC1A5 solute carrier family 1 (neutral amino acid transporter), member 5
SLC41A2 solute carrier family 41 (magnesium transporter), member 2
SMAD4 SMAD family member 4
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1
SMOC1 SPARC related modular calcium binding 1
SPEN spen family transcriptional repressor
ST3GAL5 ST3 beta-galactoside alpha-2,3-sialyltransferase 5
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor)
SWI5 SWI5 recombination repair homolog (yeast)
SYNJ1 synaptojanin 1
TATDN2 TatD DNase domain containing 2
TLR5 toll-like receptor 5
TM9SF1 transmembrane 9 superfamily member 1
TMEM63C transmembrane protein 63C
TNIP2 TNFAIP3 interacting protein 2
TOP2B topoisomerase (DNA) II beta 180kDa
TP53 tumor protein p53
TPP2 tripeptidyl peptidase II
TRIM5 tripartite motif containing 5
UCKL1 uridine-cytidine kinase 1-like 1
UIMC1 ubiquitin interaction motif containing 1
USP45 ubiquitin specific peptidase 45
UTP20 UTP20, small subunit (SSU) processome component, homolog (yeast)
XPO6 exportin 6
YY1AP1 YY1 associated protein 1
ZNF354A zinc finger protein 354A
ZNF593 zinc finger protein 593
ZNF687 zinc finger protein 687
ZNF707 zinc finger protein 707
ZNF865 zinc finger protein 865