Liver hepatocellular carcinoma_LIHC_TCGA-ZP-A9CZ-01A-11R-A38B-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Liver hepatocellular carcinoma_LIHC (The Cancer Genome Atlas)
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Genes

344 genes with high or low expression in Liver hepatocellular carcinoma_LIHC_TCGA-ZP-A9CZ-01A-11R-A38B-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ACACB acetyl-CoA carboxylase beta
ADAMTS3 ADAM metallopeptidase with thrombospondin type 1 motif, 3
AKAP5 A kinase (PRKA) anchor protein 5
ALG6 ALG6, alpha-1,3-glucosyltransferase
ALX3 ALX homeobox 3
AMOTL1 angiomotin like 1
ANKH ANKH inorganic pyrophosphate transport regulator
ANKRD13A ankyrin repeat domain 13A
ANKRD9 ankyrin repeat domain 9
APLF aprataxin and PNKP like factor
ARHGEF9 Cdc42 guanine nucleotide exchange factor (GEF) 9
ARPIN actin-related protein 2/3 complex inhibitor
ASB16-AS1 ASB16 antisense RNA 1
ASB9 ankyrin repeat and SOCS box containing 9
ATG16L2 autophagy related 16-like 2 (S. cerevisiae)
ATP6V0A2 ATPase, H+ transporting, lysosomal V0 subunit a2
ATP6V1G2 ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G2
ATP8B2 ATPase, aminophospholipid transporter, class I, type 8B, member 2
ATRNL1 attractin-like 1
B3GALTL beta 1,3-galactosyltransferase-like
BCAT2 branched chain amino-acid transaminase 2, mitochondrial
BCL2L2 BCL2-like 2
BFSP2 beaded filament structural protein 2, phakinin
BPY2 basic charge, Y-linked, 2
BRD9 bromodomain containing 9
BZRAP1 benzodiazepine receptor (peripheral) associated protein 1
C10ORF131 chromosome 10 open reading frame 131
C10ORF67 chromosome 10 open reading frame 67
C12ORF43 chromosome 12 open reading frame 43
C12ORF73 chromosome 12 open reading frame 73
C14ORF159 chromosome 14 open reading frame 159
C14ORF169 chromosome 14 open reading frame 169
C16ORF59 chromosome 16 open reading frame 59
C17ORF107 chromosome 17 open reading frame 107
C17ORF75 chromosome 17 open reading frame 75
C1QL1 complement component 1, q subcomponent-like 1
C21ORF58 chromosome 21 open reading frame 58
C6ORF223 chromosome 6 open reading frame 223
C9ORF64 chromosome 9 open reading frame 64
CAMK2N2 calcium/calmodulin-dependent protein kinase II inhibitor 2
CCDC109B coiled-coil domain containing 109B
CCDC127 coiled-coil domain containing 127
CCDC163P coiled-coil domain containing 163, pseudogene
CCDC69 coiled-coil domain containing 69
CCDC83 coiled-coil domain containing 83
CCDC87 coiled-coil domain containing 87
CCNE2 cyclin E2
CCNYL1 cyclin Y-like 1
CD1B CD1b molecule
CD1E CD1e molecule
CDC6 cell division cycle 6
CDC7 cell division cycle 7
CDCP2 CUB domain containing protein 2
CDH24 cadherin 24, type 2
CDKN1B cyclin-dependent kinase inhibitor 1B (p27, Kip1)
CDKN2C cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)
CENPK centromere protein K
CEP78 centrosomal protein 78kDa
CHAC1 ChaC glutathione-specific gamma-glutamylcyclotransferase 1
CHAF1A chromatin assembly factor 1, subunit A (p150)
CHAF1B chromatin assembly factor 1, subunit B (p60)
CHRNB1 cholinergic receptor, nicotinic, beta 1 (muscle)
CLIP1 CAP-GLY domain containing linker protein 1
CNNM2 cyclin and CBS domain divalent metal cation transport mediator 2
COCH cochlin
COQ10A coenzyme Q10 homolog A (S. cerevisiae)
COQ2 coenzyme Q2 4-hydroxybenzoate polyprenyltransferase
CPOX coproporphyrinogen oxidase
CREB3L4 cAMP responsive element binding protein 3-like 4
CTBP1-AS2 CTBP1 antisense RNA 2 (head to head)
CYP17A1 cytochrome P450, family 17, subfamily A, polypeptide 1
CYP4F22 cytochrome P450, family 4, subfamily F, polypeptide 22
DAD1P1 defender against cell death 1 pseudogene 1
DAPK1 death-associated protein kinase 1
DCHS2 dachsous cadherin-related 2
DCK deoxycytidine kinase
DDI1 DNA-damage inducible 1 homolog 1 (S. cerevisiae)
DDR2 discoidin domain receptor tyrosine kinase 2
DDX46 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46
DDX55 DEAD (Asp-Glu-Ala-Asp) box polypeptide 55
DEPDC4 DEP domain containing 4
DGKE diacylglycerol kinase, epsilon 64kDa
DHRS11 dehydrogenase/reductase (SDR family) member 11
DHRS13 dehydrogenase/reductase (SDR family) member 13
DIEXF digestive organ expansion factor homolog (zebrafish)
DOC2A double C2-like domains, alpha
DONSON downstream neighbor of SON
DPPA4 developmental pluripotency associated 4
DSN1 DSN1, MIS12 kinetochore complex component
E2F1 E2F transcription factor 1
EIF2B1 eukaryotic translation initiation factor 2B, subunit 1 alpha, 26kDa
ELOVL4 ELOVL fatty acid elongase 4
ELP5 elongator acetyltransferase complex subunit 5
ENHO energy homeostasis associated
EPB41L1 erythrocyte membrane protein band 4.1-like 1
EXO5 exonuclease 5
EXOC3 exocyst complex component 3
EXOG endo/exonuclease (5'-3'), endonuclease G-like
EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit
FAF2 Fas associated factor family member 2
FAM109B family with sequence similarity 109, member B
FAM111B family with sequence similarity 111, member B
FAM159A family with sequence similarity 159, member A
FAM189B family with sequence similarity 189, member B
FAM218A family with sequence similarity 218, member A
FAM222A family with sequence similarity 222, member A
FAM47B family with sequence similarity 47, member B
FAXC failed axon connections homolog (Drosophila)
FBXW2 F-box and WD repeat domain containing 2
FEN1 flap structure-specific endonuclease 1
FLRT1 fibronectin leucine rich transmembrane protein 1
FOXM1 forkhead box M1
GABRB3 gamma-aminobutyric acid (GABA) A receptor, beta 3
GJC1 gap junction protein, gamma 1, 45kDa
GLRB glycine receptor, beta
GLYATL2 glycine-N-acyltransferase-like 2
GPC5 glypican 5
GPN3 GPN-loop GTPase 3
GPR137C G protein-coupled receptor 137C
GPR150 G protein-coupled receptor 150
GPR162 G protein-coupled receptor 162
GPR19 G protein-coupled receptor 19
GPX7 glutathione peroxidase 7
GSG2 germ cell associated 2 (haspin)
GTSE1 G-2 and S-phase expressed 1
H2AFZ H2A histone family, member Z
HCN3 hyperpolarization activated cyclic nucleotide gated potassium channel 3
HELLS helicase, lymphoid-specific
HMGB2 high mobility group box 2
HMSD histocompatibility (minor) serpin domain containing
HOXA13 homeobox A13
HPSE heparanase
IFT81 intraflagellar transport 81
IL12B interleukin 12B
ILDR2 immunoglobulin-like domain containing receptor 2
ING1 inhibitor of growth family, member 1
ING2 inhibitor of growth family, member 2
INSIG1 insulin induced gene 1
INSL6 insulin-like 6
INTS3 integrator complex subunit 3
INTS4P2 integrator complex subunit 4 pseudogene 2
ISG20L2 interferon stimulated exonuclease gene 20kDa-like 2
ITGAE integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide)
IZUMO1R IZUMO1 receptor, JUNO
KCNJ3 potassium channel, inwardly rectifying subfamily J, member 3
KCP kielin/chordin-like protein
KDELC1 KDEL (Lys-Asp-Glu-Leu) containing 1
KDM2B lysine (K)-specific demethylase 2B
KIAA1586 KIAA1586
KIF18B kinesin family member 18B
KIF25 kinesin family member 25
KIR3DL3 killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 3
KLHL22 kelch-like family member 22
KPNB1 karyopherin (importin) beta 1
KRT222 keratin 222, type II
KRT72 keratin 72, type II
KRT73 keratin 73, type II
LCMT2 leucine carboxyl methyltransferase 2
LIG1 ligase I, DNA, ATP-dependent
LINC00235 long intergenic non-protein coding RNA 235
LINC00319 long intergenic non-protein coding RNA 319
LMNB1 lamin B1
LMNTD2 lamin tail domain containing 2
LOC100190940 uncharacterized LOC100190940
LOC145783 uncharacterized LOC145783
LOC145837
LOC220729 succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene
LOC340017 uncharacterized LOC340017
LOC728554 THO complex 3 pseudogene
LOC728613 programmed cell death 6 pseudogene
LOC730101 uncharacterized LOC730101
LRR1 leucine rich repeat protein 1
LYPD5 LY6/PLAUR domain containing 5
MAEL maelstrom spermatogenic transposon silencer
MAGEH1 melanoma antigen family H1
MAP3K15 mitogen-activated protein kinase kinase kinase 15
MAP3K3 mitogen-activated protein kinase kinase kinase 3
MAP4K2 mitogen-activated protein kinase kinase kinase kinase 2
MAPK9 mitogen-activated protein kinase 9
MC4R melanocortin 4 receptor
MCM6 minichromosome maintenance complex component 6
MCOLN3 mucolipin 3
MESDC1 mesoderm development candidate 1
MESP2 mesoderm posterior basic helix-loop-helix transcription factor 2
MFSD11 major facilitator superfamily domain containing 11
MFSD7 major facilitator superfamily domain containing 7
MIS12 MIS12 kinetochore complex component
MSH6 mutS homolog 6
MSTO1 misato 1, mitochondrial distribution and morphology regulator
MSTO2P misato family member 2, pseudogene
MTMR7 myotubularin related protein 7
MYO19 myosin XIX
NCAPG2 non-SMC condensin II complex, subunit G2
NEURL1B neuralized E3 ubiquitin protein ligase 1B
NFYB nuclear transcription factor Y, beta
NKX2-5 NK2 homeobox 5
NLK nemo-like kinase
NSUN2 NOP2/Sun RNA methyltransferase family, member 2
NSUN7 NOP2/Sun domain family, member 7
NTN3 netrin 3
NUAK1 NUAK family, SNF1-like kinase, 1
NUDT9P1 nudix (nucleoside diphosphate linked moiety X)-type motif 9 pseudogene 1
NUP210 nucleoporin 210kDa
NXPH2 neurexophilin 2
ODF1 outer dense fiber of sperm tails 1
ODF3 outer dense fiber of sperm tails 3
OR2T8 olfactory receptor, family 2, subfamily T, member 8
OXER1 oxoeicosanoid (OXE) receptor 1
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I
PACSIN1 protein kinase C and casein kinase substrate in neurons 1
PANK3 pantothenate kinase 3
PAPLN papilin, proteoglycan-like sulfated glycoprotein
PARP6 poly (ADP-ribose) polymerase family, member 6
PATE4 prostate and testis expressed 4
PCNA proliferating cell nuclear antigen
PCP4L1 Purkinje cell protein 4 like 1
PDCD6 programmed cell death 6
PDE6C phosphodiesterase 6C, cGMP-specific, cone, alpha prime
PGBD1 piggyBac transposable element derived 1
PIGM phosphatidylinositol glycan anchor biosynthesis, class M
PIGW phosphatidylinositol glycan anchor biosynthesis, class W
PLCXD1 phosphatidylinositol-specific phospholipase C, X domain containing 1
PPM1D protein phosphatase, Mg2+/Mn2+ dependent, 1D
PPP1R3E protein phosphatase 1, regulatory subunit 3E
PPP2R2B protein phosphatase 2, regulatory subunit B, beta
PPP4R1 protein phosphatase 4, regulatory subunit 1
PROKR1 prokineticin receptor 1
PROKR2 prokineticin receptor 2
PRRT2 proline-rich transmembrane protein 2
PSAT1 phosphoserine aminotransferase 1
PSIP1 PC4 and SFRS1 interacting protein 1
PTMA prothymosin, alpha
PTPRJ protein tyrosine phosphatase, receptor type, J
RAB11FIP4 RAB11 family interacting protein 4 (class II)
RAB28 RAB28, member RAS oncogene family
RAB38 RAB38, member RAS oncogene family
RAB40B RAB40B, member RAS oncogene family
RAB9B RAB9B, member RAS oncogene family
RACGAP1P Rac GTPase activating protein 1 pseudogene
RAD1 RAD1 checkpoint DNA exonuclease
RAD51C RAD51 paralog C
RAD51D RAD51 paralog D
RAI14 retinoic acid induced 14
RASL11A RAS-like, family 11, member A
RBBP7 retinoblastoma binding protein 7
RFC5 replication factor C (activator 1) 5, 36.5kDa
RIPK3 receptor-interacting serine-threonine kinase 3
RIPPLY3 ripply transcriptional repressor 3
RMND5B required for meiotic nuclear division 5 homolog B (S. cerevisiae)
RNASE2 ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)
RNASEH2A ribonuclease H2, subunit A
RND2 Rho family GTPase 2
RNF130 ring finger protein 130
RPA1 replication protein A1, 70kDa
RRN3P2 RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 2
RUSC1 RUN and SH3 domain containing 1
RUSC1-AS1 RUSC1 antisense RNA 1
SALL2 spalt-like transcription factor 2
SART3 squamous cell carcinoma antigen recognized by T cells 3
SCARNA22 small Cajal body-specific RNA 22
SCML1 sex comb on midleg-like 1 (Drosophila)
SCRT1 scratch family zinc finger 1
SDCCAG8 serologically defined colon cancer antigen 8
SDHA succinate dehydrogenase complex, subunit A, flavoprotein (Fp)
SDHAP1 succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 1
SENP3 SUMO1/sentrin/SMT3 specific peptidase 3
SHD Src homology 2 domain containing transforming protein D
SKA2 spindle and kinetochore associated complex subunit 2
SLBP stem-loop binding protein
SLC13A2 solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2
SLC1A4 solute carrier family 1 (glutamate/neutral amino acid transporter), member 4
SLC25A19 solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19
SLC25A35 solute carrier family 25, member 35
SLC28A2 solute carrier family 28 (concentrative nucleoside transporter), member 2
SLC35B4 solute carrier family 35 (UDP-xylose/UDP-N-acetylglucosamine transporter), member B4
SLC36A4 solute carrier family 36 (proton/amino acid symporter), member 4
SLFN13 schlafen family member 13
SMYD4 SET and MYND domain containing 4
SNPH syntaphilin
SPAG5 sperm associated antigen 5
SRD5A2 steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)
SRP68 signal recognition particle 68kDa
SRSF2 serine/arginine-rich splicing factor 2
STX2 syntaxin 2
SUDS3 suppressor of defective silencing 3 homolog (S. cerevisiae)
SULT1E1 sulfotransferase family 1E, estrogen-preferring, member 1
SV2A synaptic vesicle glycoprotein 2A
SYNE3 spectrin repeat containing, nuclear envelope family member 3
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa
TAS2R42 taste receptor, type 2, member 42
TBCD tubulin folding cofactor D
TCAF2 TRPM8 channel-associated factor 2
TCEAL3 transcription elongation factor A (SII)-like 3
TCEAL6 transcription elongation factor A (SII)-like 6
TCF19 transcription factor 19
TEFM transcription elongation factor, mitochondrial
TFDP1 transcription factor Dp-1
THOC3 THO complex 3
TIAM1 T-cell lymphoma invasion and metastasis 1
TIFA TRAF-interacting protein with forkhead-associated domain
TMEM104 transmembrane protein 104
TMEM106A transmembrane protein 106A
TMEM116 transmembrane protein 116
TMEM14A transmembrane protein 14A
TMEM251 transmembrane protein 251
TMEM35 transmembrane protein 35
TMEM97 transmembrane protein 97
TMEM99 transmembrane protein 99
TMPO thymopoietin
TOB1 transducer of ERBB2, 1
TP53I13 tumor protein p53 inducible protein 13
TP73 tumor protein p73
TPTE2 transmembrane phosphoinositide 3-phosphatase and tensin homolog 2
TTC7A tetratricopeptide repeat domain 7A
TTTY15 testis-specific transcript, Y-linked 15 (non-protein coding)
TTTY8 testis-specific transcript, Y-linked 8 (non-protein coding)
TYMS thymidylate synthetase
UBR7 ubiquitin protein ligase E3 component n-recognin 7 (putative)
UBTD2 ubiquitin domain containing 2
UGT2A1 UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus
UGT2B28 UDP glucuronosyltransferase 2 family, polypeptide B28
UGT2B4 UDP glucuronosyltransferase 2 family, polypeptide B4
UGT3A2 UDP glycosyltransferase 3 family, polypeptide A2
ULK4P3 ULK4 pseudogene 3
UNC13B unc-13 homolog B (C. elegans)
UNG uracil-DNA glycosylase
USH1G Usher syndrome 1G (autosomal recessive)
USP50 ubiquitin specific peptidase 50
USP51 ubiquitin specific peptidase 51
WDR76 WD repeat domain 76
WDR88 WD repeat domain 88
WNT3 wingless-type MMTV integration site family, member 3
XRCC3 X-ray repair complementing defective repair in Chinese hamster cells 3
ZBTB14 zinc finger and BTB domain containing 14
ZCCHC8 zinc finger, CCHC domain containing 8
ZMYND10 zinc finger, MYND-type containing 10
ZNF232 zinc finger protein 232
ZNF346 zinc finger protein 346
ZNF354A zinc finger protein 354A
ZNF354B zinc finger protein 354B
ZNF660 zinc finger protein 660
ZNF664 zinc finger protein 664
ZRANB1 zinc finger, RAN-binding domain containing 1
ZWINT ZW10 interacting kinetochore protein