Liver hepatocellular carcinoma_LIHC_TCGA-XR-A8TG-01A-11R-A36F-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Liver hepatocellular carcinoma_LIHC (The Cancer Genome Atlas)
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Genes

442 genes with high or low expression in Liver hepatocellular carcinoma_LIHC_TCGA-XR-A8TG-01A-11R-A36F-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
AADACL3 arylacetamide deacetylase-like 3
ADAMTS1 ADAM metallopeptidase with thrombospondin type 1 motif, 1
ADAMTS4 ADAM metallopeptidase with thrombospondin type 1 motif, 4
ADAMTSL3 ADAMTS-like 3
AJUBA ajuba LIM protein
AK9 adenylate kinase 9
AMELY amelogenin, Y-linked
AMOTL1 angiomotin like 1
ANAPC10 anaphase promoting complex subunit 10
ANXA10 annexin A10
AOX2P aldehyde oxidase 2 pseudogene
ARHGAP33 Rho GTPase activating protein 33
ARHGEF35 Rho guanine nucleotide exchange factor (GEF) 35
ARHGEF5 Rho guanine nucleotide exchange factor (GEF) 5
ARL13A ADP-ribosylation factor-like 13A
ARL5B ADP-ribosylation factor-like 5B
ARMS2 age-related maculopathy susceptibility 2
ARNT aryl hydrocarbon receptor nuclear translocator
ASCL3 achaete-scute family bHLH transcription factor 3
ASXL1 additional sex combs like transcriptional regulator 1
ATE1 arginyltransferase 1
ATF1 activating transcription factor 1
ATF3 activating transcription factor 3
ATG2B autophagy related 2B
ATXN7 ataxin 7
ATXN7L2 ataxin 7-like 2
BACH1 BTB and CNC homology 1, basic leucine zipper transcription factor 1
BBS7 Bardet-Biedl syndrome 7
BOD1L1 biorientation of chromosomes in cell division 1-like 1
BRCA2 breast cancer 2, early onset
BRD2 bromodomain containing 2
BREA2 breast cancer estrogen-induced apoptosis 2
BRIP1 BRCA1 interacting protein C-terminal helicase 1
BTG3 BTG family, member 3
BTN2A1 butyrophilin, subfamily 2, member A1
C16ORF87 chromosome 16 open reading frame 87
C1ORF146 chromosome 1 open reading frame 146
C4ORF19 chromosome 4 open reading frame 19
C4ORF29 chromosome 4 open reading frame 29
CAMSAP1 calmodulin regulated spectrin-associated protein 1
CBLB Cbl proto-oncogene B, E3 ubiquitin protein ligase
CCDC144B coiled-coil domain containing 144B (pseudogene)
CCDC155 coiled-coil domain containing 155
CCDC163P coiled-coil domain containing 163, pseudogene
CCDC171 coiled-coil domain containing 171
CCDC82 coiled-coil domain containing 82
CCL11 chemokine (C-C motif) ligand 11
CCNA2 cyclin A2
CCNL1 cyclin L1
CD14 CD14 molecule
CDH8 cadherin 8, type 2
CDKN2AIP CDKN2A interacting protein
CDKN2B cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)
CDR2 cerebellar degeneration-related protein 2, 62kDa
CDY2B chromodomain protein, Y-linked, 2B
CEBPG CCAAT/enhancer binding protein (C/EBP), gamma
CENPC centromere protein C
CENPU centromere protein U
CEP44 centrosomal protein 44kDa
CFAP52 cilia and flagella associated protein 52
CGN cingulin
CHD2 chromodomain helicase DNA binding protein 2
CHEK2 checkpoint kinase 2
CLCA3P chloride channel accessory 3, pseudogene
CLGN calmegin
CLIP1 CAP-GLY domain containing linker protein 1
CLRN2 clarin 2
CLSPN claspin
CLTCL1 clathrin, heavy chain-like 1
CLUHP3 clustered mitochondria (cluA/CLU1) homolog pseudogene 3
CMYA5 cardiomyopathy associated 5
CNGB1 cyclic nucleotide gated channel beta 1
CNTLN centlein, centrosomal protein
COL6A5 collagen, type VI, alpha 5
COQ10B coenzyme Q10 homolog B (S. cerevisiae)
CPEB2 cytoplasmic polyadenylation element binding protein 2
CRCT1 cysteine-rich C-terminal 1
CRNKL1 crooked neck pre-mRNA splicing factor 1
CRTC3 CREB regulated transcription coactivator 3
CSRNP1 cysteine-serine-rich nuclear protein 1
CSRP1 cysteine and glycine-rich protein 1
CTNNA3 catenin (cadherin-associated protein), alpha 3
CWF19L2 CWF19-like 2, cell cycle control (S. pombe)
CXCL8 chemokine (C-X-C motif) ligand 8
CXORF56 chromosome X open reading frame 56
CYSLTR2 cysteinyl leukotriene receptor 2
DACH2 dachshund family transcription factor 2
DCK deoxycytidine kinase
DDX53 DEAD (Asp-Glu-Ala-Asp) box polypeptide 53
DEFB109P1B defensin, beta 109, pseudogene 1B
DENND1B DENN/MADD domain containing 1B
DHRS13 dehydrogenase/reductase (SDR family) member 13
DNAH11 dynein, axonemal, heavy chain 11
DNAJB12 DnaJ (Hsp40) homolog, subfamily B, member 12
DNMBP-AS1 DNMBP antisense RNA 1
DOT1L DOT1-like histone H3K79 methyltransferase
DRD3 dopamine receptor D3
DSN1 DSN1, MIS12 kinetochore complex component
DUSP10 dual specificity phosphatase 10
EEA1 early endosome antigen 1
EFTUD1 elongation factor Tu GTP binding domain containing 1
EGFR epidermal growth factor receptor
EHBP1 EH domain binding protein 1
EIF5A2 eukaryotic translation initiation factor 5A2
ELF2 E74-like factor 2 (ets domain transcription factor)
ELL elongation factor RNA polymerase II
EML5 echinoderm microtubule associated protein like 5
EMP1 epithelial membrane protein 1
ENTPD7 ectonucleoside triphosphate diphosphohydrolase 7
ETV3 ets variant 3
EXOSC6 exosome component 6
F13B coagulation factor XIII, B polypeptide
F2RL1 coagulation factor II (thrombin) receptor-like 1
FAM106A family with sequence similarity 106, member A
FAM106CP family with sequence similarity 106, member C, pseudogene
FAM114A1 family with sequence similarity 114, member A1
FAM221A family with sequence similarity 221, member A
FAM45A family with sequence similarity 45, member A
FAM45B family with sequence similarity 45, member A pseudogene
FAM47C family with sequence similarity 47, member C
FANCA Fanconi anemia, complementation group A
FANCD2OS FANCD2 opposite strand
FAT1 FAT atypical cadherin 1
FBLN7 fibulin 7
FBXW7 F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase
FER1L4 fer-1-like family member 4, pseudogene (functional)
FILIP1L filamin A interacting protein 1-like
FIP1L1 factor interacting with PAPOLA and CPSF1
FLJ26850 FLJ26850 protein
FLJ30679 uncharacterized protein FLJ30679
FNIP2 folliculin interacting protein 2
FOSB FBJ murine osteosarcoma viral oncogene homolog B
FRG1 FSHD region gene 1
FRG1B FSHD region gene 1 family, member B
FRMD4B FERM domain containing 4B
GAB1 GRB2-associated binding protein 1
GKN2 gastrokine 2
GLRA3 glycine receptor, alpha 3
GOLGA5 golgin A5
GPATCH2L G patch domain containing 2-like
GPC6 glypican 6
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)
GPR37 G protein-coupled receptor 37 (endothelin receptor type B-like)
GPR89A G protein-coupled receptor 89A
GTF2H3 general transcription factor IIH, polypeptide 3, 34kDa
GUCY1B3 guanylate cyclase 1, soluble, beta 3
H1F0 H1 histone family, member 0
HAUS3 HAUS augmin-like complex, subunit 3
HCG4 HLA complex group 4 (non-protein coding)
HCG4B HLA complex group 4B (non-protein coding)
HIST1H1D histone cluster 1, H1d
HIST1H2BA histone cluster 1, H2ba
HIST1H2BJ histone cluster 1, H2bj
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2
HMMR hyaluronan-mediated motility receptor (RHAMM)
HORMAD2 HORMA domain containing 2
HPRT1 hypoxanthine phosphoribosyltransferase 1
HRG histidine-rich glycoprotein
HSD3B2 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2
HUS1B HUS1 checkpoint homolog b (S. pombe)
HYDIN HYDIN, axonemal central pair apparatus protein
ICAM1 intercellular adhesion molecule 1
ICAM5 intercellular adhesion molecule 5, telencephalin
IER3 immediate early response 3
IFT81 intraflagellar transport 81
IGF2BP2-AS1 IGF2BP2 antisense RNA 1
IL20 interleukin 20
IL22 interleukin 22
IL37 interleukin 37
IL6 interleukin 6
INE1 inactivation escape 1 (non-protein coding)
INHBA inhibin, beta A
INHBB inhibin, beta B
INTS4P2 integrator complex subunit 4 pseudogene 2
IQCF2 IQ motif containing F2
ITCH itchy E3 ubiquitin protein ligase
JADE1 jade family PHD finger 1
JMJD1C jumonji domain containing 1C
JUN jun proto-oncogene
JUNB jun B proto-oncogene
JUND jun D proto-oncogene
KALRN kalirin, RhoGEF kinase
KCNJ3 potassium channel, inwardly rectifying subfamily J, member 3
KCNT2 potassium channel, sodium activated subfamily T, member 2
KIAA0922 KIAA0922
KIAA1109 KIAA1109
KIAA1958 KIAA1958
KLF4 Kruppel-like factor 4 (gut)
KLHL40 kelch-like family member 40
KRT28 keratin 28, type I
KRTAP5-3 keratin associated protein 5-3
KRTAP8-1 keratin associated protein 8-1
LARP1B La ribonucleoprotein domain family, member 1B
LCORL ligand dependent nuclear receptor corepressor-like
LDLR low density lipoprotein receptor
LIN52 lin-52 DREAM MuvB core complex component
LINC00593 long intergenic non-protein coding RNA 593
LINC00597 long intergenic non-protein coding RNA 597
LOC100132215 uncharacterized LOC100132215
LOC145837
LOC389705 chromosome 4 open reading frame 27 pseudogene
LOC441454 prothymosin, alpha pseudogene
LOC645752 golgin A6 family, member A pseudogene
LONRF3 LON peptidase N-terminal domain and ring finger 3
LRBA LPS-responsive vesicle trafficking, beach and anchor containing
LRRC8A leucine rich repeat containing 8 family, member A
MAFF v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog F
MAFK v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog K
MAGI1 membrane associated guanylate kinase, WW and PDZ domain containing 1
MAP3K13 mitogen-activated protein kinase kinase kinase 13
MAP3K9 mitogen-activated protein kinase kinase kinase 9
MCL1 myeloid cell leukemia 1
MEDAG mesenteric estrogen-dependent adipogenesis
MFSD8 major facilitator superfamily domain containing 8
MGC27382 uncharacterized MGC27382
MMP3 matrix metallopeptidase 3
MND1 meiotic nuclear divisions 1 homolog (S. cerevisiae)
MOBP myelin-associated oligodendrocyte basic protein
MORC3 MORC family CW-type zinc finger 3
MRFAP1 Morf4 family associated protein 1
MROH7 maestro heat-like repeat family member 7
MTHFR methylenetetrahydrofolate reductase (NAD(P)H)
MYLK4 myosin light chain kinase family, member 4
N4BP2 NEDD4 binding protein 2
N4BP2L2-IT2 N4BPL2 intronic transcript 2
NAALAD2 N-acetylated alpha-linked acidic dipeptidase 2
NAF1 nuclear assembly factor 1 ribonucleoprotein
NCAPG non-SMC condensin I complex, subunit G
NCOA7 nuclear receptor coactivator 7
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase
NEK7 NIMA-related kinase 7
NFIL3 nuclear factor, interleukin 3 regulated
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta
NFYB nuclear transcription factor Y, beta
NHLRC3 NHL repeat containing 3
NR3C2 nuclear receptor subfamily 3, group C, member 2
NR5A1 nuclear receptor subfamily 5, group A, member 1
NRN1L neuritin 1-like
NSMCE4A non-SMC element 4 homolog A (S. cerevisiae)
NUP153 nucleoporin 153kDa
NUP62CL nucleoporin 62kDa C-terminal like
NUSAP1 nucleolar and spindle associated protein 1
NWD2 NACHT and WD repeat domain containing 2
OCLN occludin
ODF3L1 outer dense fiber of sperm tails 3-like 1
OPN4 opsin 4
OR11H12 olfactory receptor, family 11, subfamily H, member 12
OR2A25 olfactory receptor, family 2, subfamily A, member 25
OR2A4 olfactory receptor, family 2, subfamily A, member 4
OR2A7 olfactory receptor, family 2, subfamily A, member 7
OR51B5 olfactory receptor, family 51, subfamily B, member 5
OR52E6 olfactory receptor, family 52, subfamily E, member 6
OR52N1 olfactory receptor, family 52, subfamily N, member 1
OR5P3 olfactory receptor, family 5, subfamily P, member 3
OR6S1 olfactory receptor, family 6, subfamily S, member 1
OR8B8 olfactory receptor, family 8, subfamily B, member 8
OSBPL6 oxysterol binding protein-like 6
OTUD4 OTU deubiquitinase 4
PAICS phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase
PARP15 poly (ADP-ribose) polymerase family, member 15
PATE4 prostate and testis expressed 4
PAWR PRKC, apoptosis, WT1, regulator
PBOV1 prostate and breast cancer overexpressed 1
PCDHGB6 protocadherin gamma subfamily B, 6
PDPR pyruvate dehydrogenase phosphatase regulatory subunit
PDXDC2P pyridoxal-dependent decarboxylase domain containing 2, pseudogene
PDYN prodynorphin
PER2 period circadian clock 2
PHF12 PHD finger protein 12
PHF13 PHD finger protein 13
PHF5A PHD finger protein 5A
PHLPP2 PH domain and leucine rich repeat protein phosphatase 2
PI4K2B phosphatidylinositol 4-kinase type 2 beta
PIGA phosphatidylinositol glycan anchor biosynthesis, class A
PIGK phosphatidylinositol glycan anchor biosynthesis, class K
PIK3C2G phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 gamma
PIP5K1A phosphatidylinositol-4-phosphate 5-kinase, type I, alpha
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific)
PLCL2 phospholipase C-like 2
PLD1 phospholipase D1, phosphatidylcholine-specific
PLK4 polo-like kinase 4
PMCH pro-melanin-concentrating hormone
POGZ pogo transposable element with ZNF domain
PPARD peroxisome proliferator-activated receptor delta
PPP1R15B protein phosphatase 1, regulatory subunit 15B
PRAMEF10 PRAME family member 10
PRAMEF11 PRAME family member 11
PRAMEF4 PRAME family member 4
PRAMEF5 PRAME family member 5
PRAMEF6 PRAME family member 6
PRAMEF9 PRAME family member 9
PRIMPOL primase and polymerase (DNA-directed)
PRRC2A proline-rich coiled-coil 2A
PSG6 pregnancy specific beta-1-glycoprotein 6
PSIP1 PC4 and SFRS1 interacting protein 1
PSMB2 proteasome (prosome, macropain) subunit, beta type, 2
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)
PTH2R parathyroid hormone 2 receptor
PTPN5 protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)
PTPRVP protein tyrosine phosphatase, receptor type, V, pseudogene
PWRN2 Prader-Willi region non-protein coding RNA 2
RAB11B RAB11B, member RAS oncogene family
RANBP9 RAN binding protein 9
RAPGEF4 Rap guanine nucleotide exchange factor (GEF) 4
RAPH1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1
RARA retinoic acid receptor, alpha
RBM15 RNA binding motif protein 15
RBMXL1 RNA binding motif protein, X-linked-like 1
RBMY1A3P RNA binding motif protein, Y-linked, family 1, member A3 pseudogene
RBMY1E RNA binding motif protein, Y-linked, family 1, member E
RBMY1F RNA binding motif protein, Y-linked, family 1, member F
RFX1 regulatory factor X, 1 (influences HLA class II expression)
RGAG1 retrotransposon gag domain containing 1
RHPN2 rhophilin, Rho GTPase binding protein 2
RLF rearranged L-myc fusion
RNASE9 ribonuclease, RNase A family, 9 (non-active)
RPL21P44 ribosomal protein L21 pseudogene 44
RPS6KA5 ribosomal protein S6 kinase, 90kDa, polypeptide 5
RUFY3 RUN and FYVE domain containing 3
SAP30 Sin3A-associated protein, 30kDa
SATB1 SATB homeobox 1
SCLT1 sodium channel and clathrin linker 1
SCN8A sodium channel, voltage gated, type VIII alpha subunit
SEC24A SEC24 family member A
SERPING1 serpin peptidase inhibitor, clade G (C1 inhibitor), member 1
SETD7 SET domain containing (lysine methyltransferase) 7
SF3B3 splicing factor 3b, subunit 3, 130kDa
SFMBT1 Scm-like with four mbt domains 1
SH2D6 SH2 domain containing 6
SH3D19 SH3 domain containing 19
SH3RF1 SH3 domain containing ring finger 1
SIAH1 siah E3 ubiquitin protein ligase 1
SIK2 salt-inducible kinase 2
SIN3A SIN3 transcription regulator family member A
SIRT1 sirtuin 1
SKIL SKI-like proto-oncogene
SLAIN2 SLAIN motif family, member 2
SLC10A7 solute carrier family 10, member 7
SLC17A4 solute carrier family 17, member 4
SLC20A1 solute carrier family 20 (phosphate transporter), member 1
SLC32A1 solute carrier family 32 (GABA vesicular transporter), member 1
SMAD1 SMAD family member 1
SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5
SMC5 structural maintenance of chromosomes 5
SMEK1 SMEK homolog 1, suppressor of mek1 (Dictyostelium)
SMIM14 small integral membrane protein 14
SMTNL1 smoothelin-like 1
SNIP1 Smad nuclear interacting protein 1
SNORA28 small nucleolar RNA, H/ACA box 28
SNORA59B small nucleolar RNA, H/ACA box 59B
SOCS6 suppressor of cytokine signaling 6
SORBS2 sorbin and SH3 domain containing 2
SPAG17 sperm associated antigen 17
SPC24 SPC24, NDC80 kinetochore complex component
SPECC1L sperm antigen with calponin homology and coiled-coil domains 1-like
SPEN spen family transcriptional repressor
SPTY2D1 SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)
SRCAP Snf2-related CREBBP activator protein
SSX1 synovial sarcoma, X breakpoint 1
SSX8 synovial sarcoma, X breakpoint 8
STC1 stanniocalcin 1
STK35 serine/threonine kinase 35
SUZ12 SUZ12 polycomb repressive complex 2 subunit
SYPL2 synaptophysin-like 2
TAAR9 trace amine associated receptor 9 (gene/pseudogene)
TAPT1 transmembrane anterior posterior transformation 1
TAS2R40 taste receptor, type 2, member 40
TBC1D29 TBC1 domain family, member 29
TBL1Y transducin (beta)-like 1, Y-linked
TCHHL1 trichohyalin-like 1
TCP11L1 t-complex 11, testis-specific-like 1
TCP11L2 t-complex 11, testis-specific-like 2
TECRL trans-2,3-enoyl-CoA reductase-like
TEF thyrotrophic embryonic factor
TEX14 testis expressed 14
TIAM1 T-cell lymphoma invasion and metastasis 1
TICAM1 toll-like receptor adaptor molecule 1
TJP1 tight junction protein 1
TLE2 transducin-like enhancer of split 2
TLR2 toll-like receptor 2
TLR4 toll-like receptor 4
TMCO6 transmembrane and coiled-coil domains 6
TMEM192 transmembrane protein 192
TMEM217 transmembrane protein 217
TMEM38B transmembrane protein 38B
TMF1 TATA element modulatory factor 1
TMPO thymopoietin
TNNC2 troponin C type 2 (fast)
TOB2 transducer of ERBB2, 2
TOPORS topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase
TPH2 tryptophan hydroxylase 2
TPPP tubulin polymerization promoting protein
TRAPPC11 trafficking protein particle complex 11
TRHDE thyrotropin-releasing hormone degrading enzyme
TSC22D2 TSC22 domain family, member 2
TYW5 tRNA-yW synthesizing protein 5
UBA6 ubiquitin-like modifier activating enzyme 6
UGDH UDP-glucose 6-dehydrogenase
UGT2B10 UDP glucuronosyltransferase 2 family, polypeptide B10
UGT2B15 UDP glucuronosyltransferase 2 family, polypeptide B15
UGT2B28 UDP glucuronosyltransferase 2 family, polypeptide B28
UGT2B4 UDP glucuronosyltransferase 2 family, polypeptide B4
UGT2B7 UDP glucuronosyltransferase 2 family, polypeptide B7
USP12 ubiquitin specific peptidase 12
USP38 ubiquitin specific peptidase 38
USP4 ubiquitin specific peptidase 4 (proto-oncogene)
UTY ubiquitously transcribed tetratricopeptide repeat containing, Y-linked
VASN vasorin
VN1R10P vomeronasal 1 receptor 10 pseudogene
WDR19 WD repeat domain 19
WDR88 WD repeat domain 88
WEE1 WEE1 G2 checkpoint kinase
WTAP Wilms tumor 1 associated protein
WWC2 WW and C2 domain containing 2
YTHDC1 YTH domain containing 1
ZAK sterile alpha motif and leucine zipper containing kinase AZK
ZBTB20 zinc finger and BTB domain containing 20
ZBTB21 zinc finger and BTB domain containing 21
ZBTB43 zinc finger and BTB domain containing 43
ZC3H12A zinc finger CCCH-type containing 12A
ZCCHC14 zinc finger, CCHC domain containing 14
ZDHHC5 zinc finger, DHHC-type containing 5
ZFHX3 zinc finger homeobox 3
ZNF165 zinc finger protein 165
ZNF217 zinc finger protein 217
ZNF257 zinc finger protein 257
ZNF281 zinc finger protein 281
ZNF367 zinc finger protein 367
ZNF425 zinc finger protein 425
ZNF431 zinc finger protein 431
ZNF460 zinc finger protein 460
ZNF541 zinc finger protein 541
ZNF595 zinc finger protein 595
ZNF644 zinc finger protein 644
ZNF670 zinc finger protein 670
ZNF721 zinc finger protein 721
ZNF774 zinc finger protein 774
ZNF878 zinc finger protein 878
ZNF98 zinc finger protein 98
ZNF99 zinc finger protein 99

low expression

Symbol Name
COPS7A COP9 signalosome subunit 7A
WBSCR16 Williams-Beuren syndrome chromosome region 16