Liver hepatocellular carcinoma_LIHC_TCGA-UB-AA0V-01A-11R-A38B-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Liver hepatocellular carcinoma_LIHC (The Cancer Genome Atlas)
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Genes

194 genes with high or low expression in Liver hepatocellular carcinoma_LIHC_TCGA-UB-AA0V-01A-11R-A38B-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABCA9 ATP-binding cassette, sub-family A (ABC1), member 9
ABCD3 ATP-binding cassette, sub-family D (ALD), member 3
ACOT12 acyl-CoA thioesterase 12
ACTL7B actin-like 7B
ADAMTSL2 ADAMTS-like 2
ADRB3 adrenoceptor beta 3
AFF4 AF4/FMR2 family, member 4
APLNR apelin receptor
ATP13A3 ATPase type 13A3
B3GALT5-AS1 B3GALT5 antisense RNA 1
BEND2 BEN domain containing 2
BMS1P5 BMS1 ribosome biogenesis factor pseudogene 5
C12ORF71 chromosome 12 open reading frame 71
C1ORF168 chromosome 1 open reading frame 168
C1QTNF7 C1q and tumor necrosis factor related protein 7
C21ORF62 chromosome 21 open reading frame 62
C2ORF27B chromosome 2 open reading frame 27B
C2ORF73 chromosome 2 open reading frame 73
C3ORF36 chromosome 3 open reading frame 36
C7 complement component 7
C9ORF171 chromosome 9 open reading frame 171
CBFA2T3 core-binding factor, runt domain, alpha subunit 2; translocated to, 3
CBWD5 COBW domain containing 5
CCBE1 collagen and calcium binding EGF domains 1
CCDC146 coiled-coil domain containing 146
CCDC3 coiled-coil domain containing 3
CD226 CD226 molecule
CDCP2 CUB domain containing protein 2
CHRM2 cholinergic receptor, muscarinic 2
CLDN20 claudin 20
CLEC12A C-type lectin domain family 12, member A
CLEC12B C-type lectin domain family 12, member B
CLIC6 chloride intracellular channel 6
CNTN3 contactin 3 (plasmacytoma associated)
COL6A6 collagen, type VI, alpha 6
COLEC10 collectin sub-family member 10 (C-type lectin)
CPXM2 carboxypeptidase X (M14 family), member 2
CRHBP corticotropin releasing hormone binding protein
CTNNA3 catenin (cadherin-associated protein), alpha 3
DACH1 dachshund family transcription factor 1
DACT3 dishevelled-binding antagonist of beta-catenin 3
DCHS1 dachsous cadherin-related 1
DCN decorin
DCUN1D3 DCN1, defective in cullin neddylation 1, domain containing 3
DHH desert hedgehog
DLEC1 deleted in lung and esophageal cancer 1
DOPEY1 dopey family member 1
DPT dermatopontin
EHD3 EH-domain containing 3
ELOVL6 ELOVL fatty acid elongase 6
EMCN endomucin
FAM13C family with sequence similarity 13, member C
FAM163B family with sequence similarity 163, member B
FAM188A family with sequence similarity 188, member A
FAM35BP family with sequence similarity 35, member A pseudogene
FAM35DP family with sequence similarity 35, member A pseudogene
FAM74A1 family with sequence similarity 74, member A1
FAT4 FAT atypical cadherin 4
FBLN5 fibulin 5
FCER1A Fc fragment of IgE, high affinity I, receptor for; alpha polypeptide
FMO6P flavin containing monooxygenase 6 pseudogene
FOLH1B folate hydrolase 1B
FREM2 FRAS1 related extracellular matrix protein 2
FXN frataxin
GCFC2 GC-rich sequence DNA-binding factor 2
GDF2 growth differentiation factor 2
GLIPR1L1 GLI pathogenesis-related 1 like 1
GOLGA6D golgin A6 family, member D
GOLGA6L5P golgin A6 family-like 5, pseudogene
GP6 glycoprotein VI (platelet)
GPM6A glycoprotein M6A
GPR182 G protein-coupled receptor 182
HDAC6 histone deacetylase 6
HECW2 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2
HEG1 heart development protein with EGF-like domains 1
HIST1H2AA histone cluster 1, H2aa
HIST3H3 histone cluster 3, H3
HTR6 5-hydroxytryptamine (serotonin) receptor 6, G protein-coupled
IL2 interleukin 2
ITGA10 integrin, alpha 10
ITGA9 integrin, alpha 9
ITGBL1 integrin, beta-like 1 (with EGF-like repeat domains)
JDP2 Jun dimerization protein 2
KDM8 lysine (K)-specific demethylase 8
KIAA0087 KIAA0087
KIAA1109 KIAA1109
KLHDC1 kelch domain containing 1
KLHL33 kelch-like family member 33
LAMA2 laminin, alpha 2
LAMC3 laminin, gamma 3
LDB3 LIM domain binding 3
LEAP2 liver expressed antimicrobial peptide 2
LHX6 LIM homeobox 6
LIFR leukemia inhibitory factor receptor alpha
LINC00028 long intergenic non-protein coding RNA 28
LINC00167 long intergenic non-protein coding RNA 167
LINC00305 long intergenic non-protein coding RNA 305
LOC389033 placenta-specific 9 pseudogene
LRRC55 leucine rich repeat containing 55
LTBP4 latent transforming growth factor beta binding protein 4
LYPD2 LY6/PLAUR domain containing 2
LYPD5 LY6/PLAUR domain containing 5
MACF1 microtubule-actin crosslinking factor 1
MFAP4 microfibrillar-associated protein 4
MICU3 mitochondrial calcium uptake family, member 3
MMRN1 multimerin 1
MPPED1 metallophosphoesterase domain containing 1
MT1IP metallothionein 1I, pseudogene
MYH10 myosin, heavy chain 10, non-muscle
MYH11 myosin, heavy chain 11, smooth muscle
MYOCD myocardin
MYOM3 myomesin 3
NEXN nexilin (F actin binding protein)
NXF3 nuclear RNA export factor 3
ODF4 outer dense fiber of sperm tails 4
OR2F1 olfactory receptor, family 2, subfamily F, member 1 (gene/pseudogene)
OR52D1 olfactory receptor, family 52, subfamily D, member 1
PCDH17 protocadherin 17
PCDHGB7 protocadherin gamma subfamily B, 7
PEX11A peroxisomal biogenesis factor 11 alpha
PGLYRP3 peptidoglycan recognition protein 3
PHOSPHO1 phosphatase, orphan 1
PI16 peptidase inhibitor 16
PLCXD3 phosphatidylinositol-specific phospholipase C, X domain containing 3
PLGLA plasminogen-like A (pseudogene)
PLIN1 perilipin 1
PLIN2 perilipin 2
POM121L4P POM121 transmembrane nucleoporin-like 4 pseudogene
PPP1R12B protein phosphatase 1, regulatory subunit 12B
PPP1R3B protein phosphatase 1, regulatory subunit 3B
PRICKLE1 prickle homolog 1 (Drosophila)
PRO0611 PRO0611 protein
PRR18 proline rich 18
PRSS45 protease, serine, 45
PRSS53 protease, serine, 53
PTGIR prostaglandin I2 (prostacyclin) receptor (IP)
PTPN21 protein tyrosine phosphatase, non-receptor type 21
PTPRB protein tyrosine phosphatase, receptor type, B
PTX4 pentraxin 4, long
PWRN2 Prader-Willi region non-protein coding RNA 2
RIC3 RIC3 acetylcholine receptor chaperone
RNF112 ring finger protein 112
RNF165 ring finger protein 165
RNF180 ring finger protein 180
RPL23AP64 ribosomal protein L23a pseudogene 64
SAMD4A sterile alpha motif domain containing 4A
SERPINE3 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3
SFRP1 secreted frizzled-related protein 1
SH2B3 SH2B adaptor protein 3
SLC16A13 solute carrier family 16, member 13
SLC22A10 solute carrier family 22, member 10
SLC25A47 solute carrier family 25, member 47
SLC35G5 solute carrier family 35, member G5
SLITRK6 SLIT and NTRK-like family, member 6
SMAD6 SMAD family member 6
SMCR5 Smith-Magenis syndrome chromosome region, candidate 5 (non-protein coding)
SNORA4 small nucleolar RNA, H/ACA box 4
SOST sclerostin
SPDYE1 speedy/RINGO cell cycle regulator family member E1
SPHKAP SPHK1 interactor, AKAP domain containing
SPINK7 serine peptidase inhibitor, Kazal type 7 (putative)
SRD5A2 steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)
SUPT20HL2 suppressor of Ty 20 homolog (S. cerevisiae)-like 2
SVEP1 sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1
SYDE2 synapse defective 1, Rho GTPase, homolog 2 (C. elegans)
SYNE1 spectrin repeat containing, nuclear envelope 1
SYTL2 synaptotagmin-like 2
TAS2R3 taste receptor, type 2, member 3
TAS2R50 taste receptor, type 2, member 50
TCF21 transcription factor 21
TEK TEK tyrosine kinase, endothelial
TEX26 testis expressed 26
TFPI2 tissue factor pathway inhibitor 2
THBD thrombomodulin
TIGD4 tigger transposable element derived 4
TMEM106A transmembrane protein 106A
TMEM132E transmembrane protein 132E
TMEM154 transmembrane protein 154
TMEM215 transmembrane protein 215
TMEM220 transmembrane protein 220
TMEM26 transmembrane protein 26
TNXB tenascin XB
TRPM7 transient receptor potential cation channel, subfamily M, member 7
TRPV3 transient receptor potential cation channel, subfamily V, member 3
TSPAN11 tetraspanin 11
TSSK4 testis-specific serine kinase 4
UCP1 uncoupling protein 1 (mitochondrial, proton carrier)
VIPR1 vasoactive intestinal peptide receptor 1
WDR17 WD repeat domain 17
WFDC1 WAP four-disulfide core domain 1
XIST X inactive specific transcript (non-protein coding)
ZNF157 zinc finger protein 157
ZNF417 zinc finger protein 417
ZNF660 zinc finger protein 660