Liver hepatocellular carcinoma_LIHC_TCGA-T1-A6J8-01A-11R-A32O-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Liver hepatocellular carcinoma_LIHC (The Cancer Genome Atlas)
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Genes

408 genes with high or low expression in Liver hepatocellular carcinoma_LIHC_TCGA-T1-A6J8-01A-11R-A32O-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
AARS alanyl-tRNA synthetase
ABCC3 ATP-binding cassette, sub-family C (CFTR/MRP), member 3
ACAD10 acyl-CoA dehydrogenase family, member 10
ACOT1 acyl-CoA thioesterase 1
ACOT2 acyl-CoA thioesterase 2
ACOT4 acyl-CoA thioesterase 4
ACOT9 acyl-CoA thioesterase 9
ACOX3 acyl-CoA oxidase 3, pristanoyl
ACPP acid phosphatase, prostate
ACY1 aminoacylase 1
ACY3 aminoacylase 3
ADAM30 ADAM metallopeptidase domain 30
ADAMTS17 ADAM metallopeptidase with thrombospondin type 1 motif, 17
ADD1 adducin 1 (alpha)
AIFM2 apoptosis-inducing factor, mitochondrion-associated, 2
AIM1L absent in melanoma 1-like
AIMP2 aminoacyl tRNA synthetase complex-interacting multifunctional protein 2
AKR1B10 aldo-keto reductase family 1, member B10 (aldose reductase)
AKR1B15 aldo-keto reductase family 1, member B15
AKR1C3 aldo-keto reductase family 1, member C3
ALG5 ALG5, dolichyl-phosphate beta-glucosyltransferase
ALX1 ALX homeobox 1
ANAPC4 anaphase promoting complex subunit 4
ANG angiogenin, ribonuclease, RNase A family, 5
ANXA11 annexin A11
APEH acylaminoacyl-peptide hydrolase
APOA1BP apolipoprotein A-I binding protein
APOC1P1 apolipoprotein C-I pseudogene 1
ARF3 ADP-ribosylation factor 3
ARHGEF5 Rho guanine nucleotide exchange factor (GEF) 5
ARL13A ADP-ribosylation factor-like 13A
ARL8A ADP-ribosylation factor-like 8A
ASB12 ankyrin repeat and SOCS box containing 12
ASB8 ankyrin repeat and SOCS box containing 8
ATF2 activating transcription factor 2
ATP5A1 ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle
ATP5B ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
ATP5C1 ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1
ATP5G3 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)
BEND7 BEN domain containing 7
BEST1 bestrophin 1
BEX2 brain expressed X-linked 2
BLOC1S4 biogenesis of lysosomal organelles complex-1, subunit 4, cappuccino
BMP8B bone morphogenetic protein 8b
BTBD11 BTB (POZ) domain containing 11
C10ORF11 chromosome 10 open reading frame 11
C14ORF159 chromosome 14 open reading frame 159
C14ORF169 chromosome 14 open reading frame 169
C18ORF32 chromosome 18 open reading frame 32
C20ORF24 chromosome 20 open reading frame 24
C4ORF19 chromosome 4 open reading frame 19
C4ORF45 chromosome 4 open reading frame 45
C5ORF47 chromosome 5 open reading frame 47
CABP4 calcium binding protein 4
CADM1 cell adhesion molecule 1
CAP2 CAP, adenylate cyclase-associated protein, 2 (yeast)
CAPN1 calpain 1, (mu/I) large subunit
CAPZA3 capping protein (actin filament) muscle Z-line, alpha 3
CBLC Cbl proto-oncogene C, E3 ubiquitin protein ligase
CCDC149 coiled-coil domain containing 149
CCNJL cyclin J-like
CD151 CD151 molecule (Raph blood group)
CDK18 cyclin-dependent kinase 18
CDK5RAP1 CDK5 regulatory subunit associated protein 1
CEACAM1 carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)
CHCHD4 coiled-coil-helix-coiled-coil-helix domain containing 4
CHMP4A charged multivesicular body protein 4A
CLDN16 claudin 16
CLDN8 claudin 8
COPG1 coatomer protein complex, subunit gamma 1
CORO1B coronin, actin binding protein, 1B
COX6A2 cytochrome c oxidase subunit VIa polypeptide 2
COX7B cytochrome c oxidase subunit VIIb
CPNE4 copine IV
CSRP1 cysteine and glycine-rich protein 1
CTAG2 cancer/testis antigen 2
CTBP1 C-terminal binding protein 1
CTBP1-AS2 CTBP1 antisense RNA 2 (head to head)
CTSD cathepsin D
CTSH cathepsin H
CYB5R2 cytochrome b5 reductase 2
CYP2A6 cytochrome P450, family 2, subfamily A, polypeptide 6
CYP3A7 cytochrome P450, family 3, subfamily A, polypeptide 7
DAB1 Dab, reelin signal transducer, homolog 1 (Drosophila)
DAG1 dystroglycan 1 (dystrophin-associated glycoprotein 1)
DBNDD1 dysbindin (dystrobrevin binding protein 1) domain containing 1
DBX1 developing brain homeobox 1
DCTN2 dynactin 2 (p50)
DDX43 DEAD (Asp-Glu-Ala-Asp) box polypeptide 43
DGKQ diacylglycerol kinase, theta 110kDa
DHRS7 dehydrogenase/reductase (SDR family) member 7
DIO1 deiodinase, iodothyronine, type I
DNAJB12 DnaJ (Hsp40) homolog, subfamily B, member 12
DNMBP-AS1 DNMBP antisense RNA 1
DPH6 diphthamine biosynthesis 6
DTNA dystrobrevin, alpha
DUSP8 dual specificity phosphatase 8
EDA ectodysplasin A
EGOT eosinophil granule ontogeny transcript (non-protein coding)
EHD4 EH-domain containing 4
EIF2B2 eukaryotic translation initiation factor 2B, subunit 2 beta, 39kDa
EMC4 ER membrane protein complex subunit 4
EMC7 ER membrane protein complex subunit 7
ENPP5 ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative)
ENPP7 ectonucleotide pyrophosphatase/phosphodiesterase 7
EPHX1 epoxide hydrolase 1, microsomal (xenobiotic)
ERP29 endoplasmic reticulum protein 29
ESD esterase D
ETFA electron-transfer-flavoprotein, alpha polypeptide
EXOSC1 exosome component 1
EYA4 EYA transcriptional coactivator and phosphatase 4
FAH fumarylacetoacetate hydrolase (fumarylacetoacetase)
FAM114A1 family with sequence similarity 114, member A1
FAM177A1 family with sequence similarity 177, member A1
FAM193A family with sequence similarity 193, member A
FAM213A family with sequence similarity 213, member A
FAM45A family with sequence similarity 45, member A
FAM45B family with sequence similarity 45, member A pseudogene
FASTKD5 FAST kinase domains 5
FBXO18 F-box protein, helicase, 18
FCHSD1 FCH and double SH3 domains 1
FES FES proto-oncogene, tyrosine kinase
FGD5 FYVE, RhoGEF and PH domain containing 5
FGF13 fibroblast growth factor 13
FGFR2 fibroblast growth factor receptor 2
FGFRL1 fibroblast growth factor receptor-like 1
FTH1 ferritin, heavy polypeptide 1
FTH1P3 ferritin, heavy polypeptide 1 pseudogene 3
GABRA2 gamma-aminobutyric acid (GABA) A receptor, alpha 2
GAK cyclin G associated kinase
GALE UDP-galactose-4-epimerase
GALK2 galactokinase 2
GALM galactose mutarotase (aldose 1-epimerase)
GDPGP1 GDP-D-glucose phosphorylase 1
GHDC GH3 domain containing
GLB1 galactosidase, beta 1
GLIPR1L2 GLI pathogenesis-related 1 like 2
GLT1D1 glycosyltransferase 1 domain containing 1
GNGT1 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1
GNPDA2 glucosamine-6-phosphate deaminase 2
GPI glucose-6-phosphate isomerase
GPR155 G protein-coupled receptor 155
GPX1 glutathione peroxidase 1
GRIP1 glutamate receptor interacting protein 1
GRK4 G protein-coupled receptor kinase 4
GRPEL1 GrpE-like 1, mitochondrial (E. coli)
GSTK1 glutathione S-transferase kappa 1
GUCY2F guanylate cyclase 2F, retinal
GUF1 GUF1 GTPase homolog (S. cerevisiae)
GUSB glucuronidase, beta
H6PD hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)
HAT1 histone acetyltransferase 1
HDAC6 histone deacetylase 6
HEATR4 HEAT repeat containing 4
HECW1 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1
HEXA hexosaminidase A (alpha polypeptide)
HEXB hexosaminidase B (beta polypeptide)
HS1BP3 HCLS1 binding protein 3
HTATIP2 HIV-1 Tat interactive protein 2, 30kDa
HTR2C 5-hydroxytryptamine (serotonin) receptor 2C, G protein-coupled
HYI hydroxypyruvate isomerase (putative)
IAH1 isoamyl acetate-hydrolyzing esterase 1 homolog (S. cerevisiae)
IKBKG inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma
IQSEC3 IQ motif and Sec7 domain 3
IRS4 insulin receptor substrate 4
ITM2B integral membrane protein 2B
KATNAL2 katanin p60 subunit A-like 2
KCNAB2 potassium channel, voltage gated subfamily A regulatory beta subunit 2
KIAA0232 KIAA0232
KIAA1598
KLF14 Kruppel-like factor 14
KLHL34 kelch-like family member 34
KLHL5 kelch-like family member 5
KLK2 kallikrein-related peptidase 2
KLK3 kallikrein-related peptidase 3
KPNA7 karyopherin alpha 7 (importin alpha 8)
KRT25 keratin 25, type I
KRT28 keratin 28, type I
KRTAP13-2 keratin associated protein 13-2
LAMB2 laminin, beta 2 (laminin S)
LAMP2 lysosomal-associated membrane protein 2
LARS2 leucyl-tRNA synthetase 2, mitochondrial
LETM1 leucine zipper-EF-hand containing transmembrane protein 1
LGALS9 lectin, galactoside-binding, soluble, 9
LIAS lipoic acid synthetase
LINC00240 long intergenic non-protein coding RNA 240
LOC100134868 uncharacterized LOC100134868
LOC728613 programmed cell death 6 pseudogene
LRPAP1 low density lipoprotein receptor-related protein associated protein 1
MACROD1 MACRO domain containing 1
MAEA macrophage erythroblast attacher
MAGEA1 melanoma antigen family A1
MAN2B2 mannosidase, alpha, class 2B, member 2
MAP2 microtubule-associated protein 2
MGAT4B mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme B
MICU2 mitochondrial calcium uptake 2
MIPEP mitochondrial intermediate peptidase
MMP15 matrix metallopeptidase 15 (membrane-inserted)
MMP26 matrix metallopeptidase 26
MPZ myelin protein zero
MRFAP1 Morf4 family associated protein 1
MRFAP1L1 Morf4 family associated protein 1-like 1
MRPL35 mitochondrial ribosomal protein L35
MRPL47 mitochondrial ribosomal protein L47
MRPL49 mitochondrial ribosomal protein L49
MRPS16 mitochondrial ribosomal protein S16
MRPS22 mitochondrial ribosomal protein S22
MRPS31 mitochondrial ribosomal protein S31
MTCH2 mitochondrial carrier 2
MTIF2 mitochondrial translational initiation factor 2
MTMR14 myotubularin related protein 14
MTOR mechanistic target of rapamycin (serine/threonine kinase)
MTVR2 mouse mammary tumor virus receptor homolog 2
MTX2 metaxin 2
MXD4 MAX dimerization protein 4
MYCNOS MYCN opposite strand
MYL5 myosin, light chain 5, regulatory
MYO15B myosin XVB
N4BP2 NEDD4 binding protein 2
NAGLU N-acetylglucosaminidase, alpha
NCF2 neutrophil cytosolic factor 2
NDUFA12 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12
NDUFB8 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa
NDUFC2 NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa
NDUFS2 NADH dehydrogenase (ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q reductase)
NECAB2 N-terminal EF-hand calcium binding protein 2
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase
NEFM neurofilament, medium polypeptide
NGFRAP1 nerve growth factor receptor (TNFRSF16) associated protein 1
NINJ2 ninjurin 2
NLRX1 NLR family member X1
NOP14 NOP14 nucleolar protein
NOP14-AS1 NOP14 antisense RNA 1
NOS3 nitric oxide synthase 3 (endothelial cell)
NPAS3 neuronal PAS domain protein 3
NRDE2 NRDE-2, necessary for RNA interference, domain containing
NUDT22 nudix (nucleoside diphosphate linked moiety X)-type motif 22
NYNRIN NYN domain and retroviral integrase containing
OCIAD1 OCIA domain containing 1
OCIAD2 OCIA domain containing 2
OGDHL oxoglutarate dehydrogenase-like
OGG1 8-oxoguanine DNA glycosylase
OPTN optineurin
OR11H12 olfactory receptor, family 11, subfamily H, member 12
OR13J1 olfactory receptor, family 13, subfamily J, member 1
OR2AG2 olfactory receptor, family 2, subfamily AG, member 2
OR51E2 olfactory receptor, family 51, subfamily E, member 2
OR52H1 olfactory receptor, family 52, subfamily H, member 1
OSGIN1 oxidative stress induced growth inhibitor 1
P4HTM prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)
PARL presenilin associated, rhomboid-like
PARP4 poly (ADP-ribose) polymerase family, member 4
PCA3 prostate cancer associated 3 (non-protein coding)
PCBP1 poly(rC) binding protein 1
PCCA propionyl CoA carboxylase, alpha polypeptide
PCDHA13 protocadherin alpha 13
PCIF1 PDX1 C-terminal inhibiting factor 1
PDHA1 pyruvate dehydrogenase (lipoamide) alpha 1
PDHB pyruvate dehydrogenase (lipoamide) beta
PGAM1 phosphoglycerate mutase 1 (brain)
PGAM4 phosphoglycerate mutase family member 4
PGAM5 phosphoglycerate mutase family member 5
PGAP3 post-GPI attachment to proteins 3
PHYH phytanoyl-CoA 2-hydroxylase
PHYKPL 5-phosphohydroxy-L-lysine phospho-lyase
PI4K2B phosphatidylinositol 4-kinase type 2 beta
PIGB phosphatidylinositol glycan anchor biosynthesis, class B
PIGG phosphatidylinositol glycan anchor biosynthesis, class G
PIGT phosphatidylinositol glycan anchor biosynthesis, class T
PIK3AP1 phosphoinositide-3-kinase adaptor protein 1
PIP4K2C phosphatidylinositol-5-phosphate 4-kinase, type II, gamma
POLR2J2 polymerase (RNA) II (DNA directed) polypeptide J2
PPDPF pancreatic progenitor cell differentiation and proliferation factor
PPM1M protein phosphatase, Mg2+/Mn2+ dependent, 1M
PRADC1 protease-associated domain containing 1
PRAP1 proline-rich acidic protein 1
PRB2 proline-rich protein BstNI subfamily 2
PRB3 proline-rich protein BstNI subfamily 3
PRKAB1 protein kinase, AMP-activated, beta 1 non-catalytic subunit
PRSS45 protease, serine, 45
PRSS50 protease, serine, 50
PSEN1 presenilin 1
PTCHD3 patched domain containing 3
PTPN9 protein tyrosine phosphatase, non-receptor type 9
RAB43 RAB43, member RAS oncogene family
RAPGEF4 Rap guanine nucleotide exchange factor (GEF) 4
RARA retinoic acid receptor, alpha
RASSF10 Ras association (RalGDS/AF-6) domain family (N-terminal) member 10
RBPMS2 RNA binding protein with multiple splicing 2
REEP1 receptor accessory protein 1
RIC3 RIC3 acetylcholine receptor chaperone
RILP Rab interacting lysosomal protein
RIN3 Ras and Rab interactor 3
RITA1 RBPJ interacting and tubulin associated 1
RMND5B required for meiotic nuclear division 5 homolog B (S. cerevisiae)
RNASEH1 ribonuclease H1
RNF10 ring finger protein 10
RNF4 ring finger protein 4
RNPEP arginyl aminopeptidase (aminopeptidase B)
RPN1 ribophorin I
RRAS2 related RAS viral (r-ras) oncogene homolog 2
RRN3P1 RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 1
RRNAD1 ribosomal RNA adenine dimethylase domain containing 1
RTN1 reticulon 1
RTP3 receptor (chemosensory) transporter protein 3
SCAMP2 secretory carrier membrane protein 2
SCCPDH saccharopine dehydrogenase (putative)
SCFD1 sec1 family domain containing 1
SCFD2 sec1 family domain containing 2
SCRN3 secernin 3
SERINC2 serine incorporator 2
SFXN4 sideroflexin 4
SH3BP2 SH3-domain binding protein 2
SHBG sex hormone-binding globulin
SIPA1L2 signal-induced proliferation-associated 1 like 2
SLAIN2 SLAIN motif family, member 2
SLC22A18 solute carrier family 22, member 18
SLC22A18AS solute carrier family 22 (organic cation transporter), member 18 antisense
SLC26A1 solute carrier family 26 (anion exchanger), member 1
SLC28A1 solute carrier family 28 (concentrative nucleoside transporter), member 1
SLC2A9 solute carrier family 2 (facilitated glucose transporter), member 9
SLC30A9 solute carrier family 30 (zinc transporter), member 9
SLC35C1 solute carrier family 35 (GDP-fucose transporter), member C1
SLC35E3 solute carrier family 35, member E3
SLC35F6 solute carrier family 35, member F6
SLC3A1 solute carrier family 3 (amino acid transporter heavy chain), member 1
SLC3A2 solute carrier family 3 (amino acid transporter heavy chain), member 2
SLC41A3 solute carrier family 41, member 3
SLC50A1 solute carrier family 50 (sugar efflux transporter), member 1
SLC5A11 solute carrier family 5 (sodium/inositol cotransporter), member 11
SMIM20 small integral membrane protein 20
SORCS2 sortilin-related VPS10 domain containing receptor 2
SPATA45 spermatogenesis associated 45
SPESP1 sperm equatorial segment protein 1
SPG21 spastic paraplegia 21 (autosomal recessive, Mast syndrome)
SPPL2A signal peptide peptidase like 2A
SPRYD7 SPRY domain containing 7
SPTAN1 spectrin, alpha, non-erythrocytic 1
SRR serine racemase
SSBP3 single stranded DNA binding protein 3
STAMBP STAM binding protein
STX18 syntaxin 18
SUCLG1 succinate-CoA ligase, alpha subunit
SULT1A2 sulfotransferase family, cytosolic, 1A, phenol-preferring, member 2
TADA2B transcriptional adaptor 2B
TAS2R8 taste receptor, type 2, member 8
TBC1D14 TBC1 domain family, member 14
TEX264 testis expressed 264
TGM3 transglutaminase 3
TKT transketolase
TM9SF1 transmembrane 9 superfamily member 1
TMED10P1 transmembrane emp24-like trafficking protein 10 (yeast) pseudogene 1
TMEFF2 transmembrane protein with EGF-like and two follistatin-like domains 2
TMEM129 transmembrane protein 129, E3 ubiquitin protein ligase
TMEM132D transmembrane protein 132D
TMEM150B transmembrane protein 150B
TMEM175 transmembrane protein 175
TMEM223 transmembrane protein 223
TMEM241 transmembrane protein 241
TMEM33 transmembrane protein 33
TMEM38A transmembrane protein 38A
TMEM5 transmembrane protein 5
TMEM9 transmembrane protein 9
TNIP2 TNFAIP3 interacting protein 2
TOX2 TOX high mobility group box family member 2
TPP1 tripeptidyl peptidase I
TRABD2A TraB domain containing 2A
TRIM8 tripartite motif containing 8
TRIP4 thyroid hormone receptor interactor 4
TRNT1 tRNA nucleotidyl transferase, CCA-adding, 1
TRPM4 transient receptor potential cation channel, subfamily M, member 4
TRPV4 transient receptor potential cation channel, subfamily V, member 4
TSG101 tumor susceptibility 101
TTC17 tetratricopeptide repeat domain 17
TUBB2A tubulin, beta 2A class IIa
UBE2K ubiquitin-conjugating enzyme E2K
UBIAD1 UbiA prenyltransferase domain containing 1
UGDH UDP-glucose 6-dehydrogenase
UQCRC1 ubiquinol-cytochrome c reductase core protein I
USP50 ubiquitin specific peptidase 50
VASH2 vasohibin 2
VPS26B vacuolar protein sorting 26 homolog B (S. pombe)
VSIG10 V-set and immunoglobulin domain containing 10
WDR1 WD repeat domain 1
WDR13 WD repeat domain 13
WDR61 WD repeat domain 61
WIPF3 WAS/WASL interacting protein family, member 3
WSB2 WD repeat and SOCS box containing 2
XAGE5 X antigen family, member 5
XPNPEP1 X-prolyl aminopeptidase (aminopeptidase P) 1, soluble
XPNPEP2 X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound
ZAK sterile alpha motif and leucine zipper containing kinase AZK
ZAR1 zygote arrest 1
ZBTB42 zinc finger and BTB domain containing 42
ZBTB49 zinc finger and BTB domain containing 49
ZCCHC16 zinc finger, CCHC domain containing 16
ZCCHC4 zinc finger, CCHC domain containing 4
ZFP69 ZFP69 zinc finger protein
ZFYVE19 zinc finger, FYVE domain containing 19
ZNF541 zinc finger protein 541
ZNF655 zinc finger protein 655
ZNF684 zinc finger protein 684
ZPR1 ZPR1 zinc finger
ZYX zyxin

low expression

Symbol Name
ABHD17B abhydrolase domain containing 17B
ARL5A ADP-ribosylation factor-like 5A
IPO8 importin 8
UBE2G2 ubiquitin-conjugating enzyme E2G 2