Liver hepatocellular carcinoma_LIHC_TCGA-PD-A5DF-01A-11R-A27V-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Liver hepatocellular carcinoma_LIHC (The Cancer Genome Atlas)
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Genes

272 genes with high or low expression in Liver hepatocellular carcinoma_LIHC_TCGA-PD-A5DF-01A-11R-A27V-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABRACL ABRA C-terminal like
ACBD3 acyl-CoA binding domain containing 3
ACTR10 actin-related protein 10 homolog (S. cerevisiae)
AGPAT4 1-acylglycerol-3-phosphate O-acyltransferase 4
AJUBA ajuba LIM protein
ALPI alkaline phosphatase, intestinal
ALPP alkaline phosphatase, placental
ANXA5 annexin A5
APOA4 apolipoprotein A-IV
APOBEC3H apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H
APOL3 apolipoprotein L, 3
ARF4 ADP-ribosylation factor 4
ARF6 ADP-ribosylation factor 6
ARFGAP3 ADP-ribosylation factor GTPase activating protein 3
ARFRP1 ADP-ribosylation factor related protein 1
ARHGAP17 Rho GTPase activating protein 17
ARL1 ADP-ribosylation factor-like 1
ARL2BP ADP-ribosylation factor-like 2 binding protein
ASAP3 ArfGAP with SH3 domain, ankyrin repeat and PH domain 3
ASPN asporin
ASXL3 additional sex combs like transcriptional regulator 3
ATP1B4 ATPase, Na+/K+ transporting, beta 4 polypeptide
C12ORF65 chromosome 12 open reading frame 65
C14ORF166 chromosome 14 open reading frame 166
C16ORF58 chromosome 16 open reading frame 58
C17ORF107 chromosome 17 open reading frame 107
C1ORF123 chromosome 1 open reading frame 123
C2ORF69 chromosome 2 open reading frame 69
C3ORF22 chromosome 3 open reading frame 22
CABLES2 Cdk5 and Abl enzyme substrate 2
CCDC50 coiled-coil domain containing 50
CCL11 chemokine (C-C motif) ligand 11
CCL22 chemokine (C-C motif) ligand 22
CD200R1 CD200 receptor 1
CDC42 cell division cycle 42
CDS1 CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1
CEACAM16 carcinoembryonic antigen-related cell adhesion molecule 16
CEBPG CCAAT/enhancer binding protein (C/EBP), gamma
CFAP47 cilia and flagella associated protein 47
CIDEC cell death-inducing DFFA-like effector c
CKAP4 cytoskeleton-associated protein 4
CLCN1 chloride channel, voltage-sensitive 1
CNGB3 cyclic nucleotide gated channel beta 3
CNIH1 cornichon family AMPA receptor auxiliary protein 1
CNTLN centlein, centrosomal protein
COG7 component of oligomeric golgi complex 7
COMMD2 COMM domain containing 2
COPB2 coatomer protein complex, subunit beta 2 (beta prime)
COQ10A coenzyme Q10 homolog A (S. cerevisiae)
COQ2 coenzyme Q2 4-hydroxybenzoate polyprenyltransferase
CPA6 carboxypeptidase A6
CSRP2 cysteine and glycine-rich protein 2
CSTB cystatin B (stefin B)
CYCSP52 cytochrome c, somatic pseudogene 52
DCSTAMP dendrocyte expressed seven transmembrane protein
DDB2 damage-specific DNA binding protein 2, 48kDa
DDHD1 DDHD domain containing 1
DDOST dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit (non-catalytic)
DGAT2 diacylglycerol O-acyltransferase 2
DHCR24 24-dehydrocholesterol reductase
DHRS3 dehydrogenase/reductase (SDR family) member 3
DIO1 deiodinase, iodothyronine, type I
DIRC1 disrupted in renal carcinoma 1
DKK2 dickkopf WNT signaling pathway inhibitor 2
DNAJB11 DnaJ (Hsp40) homolog, subfamily B, member 11
DPM1 dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit
DSCR8 Down syndrome critical region 8
EBF1 early B-cell factor 1
ECE2 endothelin converting enzyme 2
EEF2K eukaryotic elongation factor 2 kinase
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3
ELL3 elongation factor RNA polymerase II-like 3
ENAH enabled homolog (Drosophila)
EXOSC10 exosome component 10
F2RL1 coagulation factor II (thrombin) receptor-like 1
FAIM Fas apoptotic inhibitory molecule
FAM188A family with sequence similarity 188, member A
FAM47E family with sequence similarity 47, member E
FAM71C family with sequence similarity 71, member C
FAP fibroblast activation protein, alpha
FBXO2 F-box protein 2
FBXO42 F-box protein 42
FBXO44 F-box protein 44
FGF21 fibroblast growth factor 21
FILIP1 filamin A interacting protein 1
FKBP3 FK506 binding protein 3, 25kDa
FNDC1 fibronectin type III domain containing 1
GBP7 guanylate binding protein 7
GJB2 gap junction protein, beta 2, 26kDa
GML glycosylphosphatidylinositol anchored molecule like
GOLGA5 golgin A5
GRHL1 grainyhead-like 1 (Drosophila)
GTSF1 gametocyte specific factor 1
GUCY1B2 guanylate cyclase 1, soluble, beta 2 (pseudogene)
H6PD hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)
HAUS6 HAUS augmin-like complex, subunit 6
HIGD1C HIG1 hypoxia inducible domain family, member 1C
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3
HLTF helicase-like transcription factor
HNRNPR heterogeneous nuclear ribonucleoprotein R
HR hair growth associated
IBTK inhibitor of Bruton agammaglobulinemia tyrosine kinase
IDH2 isocitrate dehydrogenase 2 (NADP+), mitochondrial
IFNGR2 interferon gamma receptor 2 (interferon gamma transducer 1)
IFNK interferon, kappa
IKBIP IKBKB interacting protein
IL34 interleukin 34
INHBE inhibin, beta E
IP6K3 inositol hexakisphosphate kinase 3
ITGAM integrin, alpha M (complement component 3 receptor 3 subunit)
ITLN2 intelectin 2
KCNJ1 potassium channel, inwardly rectifying subfamily J, member 1
KCNK3 potassium channel, two pore domain subfamily K, member 3
KCTD5 potassium channel tetramerization domain containing 5
KDELR3 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3
KDM8 lysine (K)-specific demethylase 8
KIAA2013 KIAA2013
KLHDC2 kelch domain containing 2
KPNA4 karyopherin alpha 4 (importin alpha 3)
KRT37 keratin 37, type I
KRTAP5-3 keratin associated protein 5-3
KTN1 kinectin 1 (kinesin receptor)
LAMB3 laminin, beta 3
LDLRAD1 low density lipoprotein receptor class A domain containing 1
LINC00293 long intergenic non-protein coding RNA 293
LINC00574 long intergenic non-protein coding RNA 574
LOC145474 uncharacterized LOC145474
LOC152225 uncharacterized LOC152225
LOC283731 uncharacterized LOC283731
LOC729609 uncharacterized LOC729609
LRR1 leucine rich repeat protein 1
LSM14B LSM14B, SCD6 homolog B (S. cerevisiae)
LYPD6B LY6/PLAUR domain containing 6B
LZIC leucine zipper and CTNNBIP1 domain containing
MAP3K7CL MAP3K7 C-terminal like
MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5
MBIP MAP3K12 binding inhibitory protein 1
MCF2L2 MCF.2 cell line derived transforming sequence-like 2
MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2
METAP2 methionyl aminopeptidase 2
MGAT2 mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase
MTG2 mitochondrial ribosome-associated GTPase 2
NAA30 N(alpha)-acetyltransferase 30, NatC catalytic subunit
NAALAD2 N-acetylated alpha-linked acidic dipeptidase 2
NAE1 NEDD8 activating enzyme E1 subunit 1
NCK1 NCK adaptor protein 1
NECAP2 NECAP endocytosis associated 2
NEMF nuclear export mediator factor
NLGN4X neuroligin 4, X-linked
NMD3 NMD3 ribosome export adaptor
NOX1 NADPH oxidase 1
NUAK1 NUAK family, SNF1-like kinase, 1
NUDT21 nudix (nucleoside diphosphate linked moiety X)-type motif 21
OGFOD1 2-oxoglutarate and iron-dependent oxygenase domain containing 1
OR10P1 olfactory receptor, family 10, subfamily P, member 1
OR4N2 olfactory receptor, family 4, subfamily N, member 2
OR52E4 olfactory receptor, family 52, subfamily E, member 4
OR52N1 olfactory receptor, family 52, subfamily N, member 1
OR52N5 olfactory receptor, family 52, subfamily N, member 5
ORMDL2 ORMDL sphingolipid biosynthesis regulator 2
OSBPL2 oxysterol binding protein-like 2
OSBPL6 oxysterol binding protein-like 6
OSTC oligosaccharyltransferase complex subunit (non-catalytic)
PCMT1 protein-L-isoaspartate (D-aspartate) O-methyltransferase
PDCD10 programmed cell death 10
PGRMC2 progesterone receptor membrane component 2
PIK3CB phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta
PITHD1 PITH (C-terminal proteasome-interacting domain of thioredoxin-like) domain containing 1
PKD2L2 polycystic kidney disease 2-like 2
PLCH2 phospholipase C, eta 2
PNRC1 proline-rich nuclear receptor coactivator 1
POSTN periostin, osteoblast specific factor
PPARD peroxisome proliferator-activated receptor delta
PPP1CB protein phosphatase 1, catalytic subunit, beta isozyme
PQLC2 PQ loop repeat containing 2
PRAMEF10 PRAME family member 10
PREX1 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1
PRKCD protein kinase C, delta
PRKCE protein kinase C, epsilon
PRR16 proline rich 16
PRSS53 protease, serine, 53
PRSS8 protease, serine, 8
PSMA3 proteasome (prosome, macropain) subunit, alpha type, 3
PSMA7 proteasome (prosome, macropain) subunit, alpha type, 7
PSMC6 proteasome (prosome, macropain) 26S subunit, ATPase, 6
PSTPIP2 proline-serine-threonine phosphatase interacting protein 2
PTPN20 protein tyrosine phosphatase, non-receptor type 20
PTPRU protein tyrosine phosphatase, receptor type, U
PXMP4 peroxisomal membrane protein 4, 24kDa
PXT1 peroxisomal, testis specific 1
PYGL phosphorylase, glycogen, liver
RBP5 retinol binding protein 5, cellular
RFK riboflavin kinase
RFTN1 raftlin, lipid raft linker 1
RGAG1 retrotransposon gag domain containing 1
RGS1 regulator of G-protein signaling 1
RHOF ras homolog family member F (in filopodia)
RNF41 ring finger protein 41, E3 ubiquitin protein ligase
RNF7 ring finger protein 7
ROGDI rogdi homolog (Drosophila)
ROS1 ROS proto-oncogene 1 , receptor tyrosine kinase
RPRD1B regulation of nuclear pre-mRNA domain containing 1B
RPS27L ribosomal protein S27-like
SBNO2 strawberry notch homolog 2 (Drosophila)
SCOC short coiled-coil protein
SEC23A Sec23 homolog A (S. cerevisiae)
SEC31A SEC31 homolog A (S. cerevisiae)
SELT selenoprotein T
SEMA3B sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B
SERP1 stress-associated endoplasmic reticulum protein 1
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1
SFRP4 secreted frizzled-related protein 4
SGK1 serum/glucocorticoid regulated kinase 1
SGK2 serum/glucocorticoid regulated kinase 2
SGMS1 sphingomyelin synthase 1
SIAH1 siah E3 ubiquitin protein ligase 1
SLC12A4 solute carrier family 12 (potassium/chloride transporter), member 4
SLC25A24 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24
SLC25A33 solute carrier family 25 (pyrimidine nucleotide carrier), member 33
SLC2A10 solute carrier family 2 (facilitated glucose transporter), member 10
SLC2A5 solute carrier family 2 (facilitated glucose/fructose transporter), member 5
SLC35C1 solute carrier family 35 (GDP-fucose transporter), member C1
SLC5A2 solute carrier family 5 (sodium/glucose cotransporter), member 2
SMAD1 SMAD family member 1
SMAD5-AS1 SMAD5 antisense RNA 1
SPAG17 sperm associated antigen 17
SPATA21 spermatogenesis associated 21
SPNS3 spinster homolog 3 (Drosophila)
SPSB1 splA/ryanodine receptor domain and SOCS box containing 1
SRBD1 S1 RNA binding domain 1
SRSF10 serine/arginine-rich splicing factor 10
SSR3 signal sequence receptor, gamma (translocon-associated protein gamma)
STRN3 striatin, calmodulin binding protein 3
SULT1A2 sulfotransferase family, cytosolic, 1A, phenol-preferring, member 2
SUV420H2 suppressor of variegation 4-20 homolog 2 (Drosophila)
SYCP3 synaptonemal complex protein 3
TAF4 TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa
TEKT1 tektin 1
TEX37 testis expressed 37
TFB2M transcription factor B2, mitochondrial
TFG TRK-fused gene
TIFA TRAF-interacting protein with forkhead-associated domain
TIGD2 tigger transposable element derived 2
TM4SF20 transmembrane 4 L six family member 20
TMED2 transmembrane emp24 domain trafficking protein 2
TMEM150B transmembrane protein 150B
TMEM189 transmembrane protein 189
TMEM243 transmembrane protein 243, mitochondrial
TMEM263 transmembrane protein 263
TMX1 thioredoxin-related transmembrane protein 1
TNFAIP8 tumor necrosis factor, alpha-induced protein 8
TRAF3 TNF receptor-associated factor 3
TRAPPC6B trafficking protein particle complex 6B
TREM2 triggering receptor expressed on myeloid cells 2
TRHDE thyrotropin-releasing hormone degrading enzyme
TRIAP1 TP53 regulated inhibitor of apoptosis 1
TRIM22 tripartite motif containing 22
TXNDC17 thioredoxin domain containing 17
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats
UNC13A unc-13 homolog A (C. elegans)
USP48 ubiquitin specific peptidase 48
VCPKMT valosin containing protein lysine (K) methyltransferase
VWA1 von Willebrand factor A domain containing 1
WIBG within bgcn homolog (Drosophila)
XAGE1E X antigen family, member 1E
XK X-linked Kx blood group
ZIC1 Zic family member 1
ZIC2 Zic family member 2
ZNF541 zinc finger protein 541
ZXDB zinc finger, X-linked, duplicated B

low expression

Symbol Name
BCL2L13 BCL2-like 13 (apoptosis facilitator)
PSMD5 proteasome (prosome, macropain) 26S subunit, non-ATPase, 5