Liver hepatocellular carcinoma_LIHC_TCGA-LG-A9QD-01A-11R-A38B-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Liver hepatocellular carcinoma_LIHC (The Cancer Genome Atlas)
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Genes

307 genes with high or low expression in Liver hepatocellular carcinoma_LIHC_TCGA-LG-A9QD-01A-11R-A38B-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
A4GALT alpha 1,4-galactosyltransferase
AANAT aralkylamine N-acetyltransferase
ABCF3 ATP-binding cassette, sub-family F (GCN20), member 3
ABLIM3 actin binding LIM protein family, member 3
ABRACL ABRA C-terminal like
ACAD9 acyl-CoA dehydrogenase family, member 9
ADGRG7 adhesion G protein-coupled receptor G7
ADHFE1 alcohol dehydrogenase, iron containing, 1
AK2 adenylate kinase 2
ALPK1 alpha-kinase 1
ANAPC13 anaphase promoting complex subunit 13
APOL1 apolipoprotein L, 1
APOL6 apolipoprotein L, 6
AQP7 aquaporin 7
ASB13 ankyrin repeat and SOCS box containing 13
ATP6AP1L ATPase, H+ transporting, lysosomal accessory protein 1-like
ATP6V1H ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H
AZI2 5-azacytidine induced 2
AZIN1 antizyme inhibitor 1
B2M beta-2-microglobulin
BAALC brain and acute leukemia, cytoplasmic
BDNF-AS BDNF antisense RNA
BTNL9 butyrophilin-like 9
C14ORF79 chromosome 14 open reading frame 79
C19ORF25 chromosome 19 open reading frame 25
C19ORF66 chromosome 19 open reading frame 66
C1ORF226 chromosome 1 open reading frame 226
C3ORF62 chromosome 3 open reading frame 62
C4ORF17 chromosome 4 open reading frame 17
C4ORF33 chromosome 4 open reading frame 33
C7ORF43 chromosome 7 open reading frame 43
C9ORF47 chromosome 9 open reading frame 47
CARKD carbohydrate kinase domain containing
CCDC106 coiled-coil domain containing 106
CCDC28A coiled-coil domain containing 28A
CD300LG CD300 molecule-like family member g
CD74 CD74 molecule, major histocompatibility complex, class II invariant chain
CDHR2 cadherin-related family member 2
CFAP69 cilia and flagella associated protein 69
CFI complement factor I
CHRD chordin
CLNS1A chloride channel, nucleotide-sensitive, 1A
CLPTM1L CLPTM1-like
CNBP CCHC-type zinc finger, nucleic acid binding protein
COPS5 COP9 signalosome subunit 5
COX17 COX17 cytochrome c oxidase copper chaperone
CRCP CGRP receptor component
CREB3L3 cAMP responsive element binding protein 3-like 3
CROCCP2 ciliary rootlet coiled-coil, rootletin pseudogene 2
CRP C-reactive protein, pentraxin-related
CSAD cysteine sulfinic acid decarboxylase
CTSO cathepsin O
CYP21A2 cytochrome P450, family 21, subfamily A, polypeptide 2
CYP3A5 cytochrome P450, family 3, subfamily A, polypeptide 5
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60
DECR1 2,4-dienoyl CoA reductase 1, mitochondrial
DEFB124 defensin, beta 124
DERL1 derlin 1
DHODH dihydroorotate dehydrogenase (quinone)
DHRS12 dehydrogenase/reductase (SDR family) member 12
DHX58 DEXH (Asp-Glu-X-His) box polypeptide 58
DKK2 dickkopf WNT signaling pathway inhibitor 2
DNAH5 dynein, axonemal, heavy chain 5
DNAJC24 DnaJ (Hsp40) homolog, subfamily C, member 24
DSC1 desmocollin 1
DTX3L deltex 3 like, E3 ubiquitin ligase
DYNLT1 dynein, light chain, Tctex-type 1
EARS2 glutamyl-tRNA synthetase 2, mitochondrial
EBAG9 estrogen receptor binding site associated, antigen, 9
ECHDC2 enoyl CoA hydratase domain containing 2
EFR3A EFR3 homolog A (S. cerevisiae)
EIF2B5 eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1
ELMOD3 ELMO/CED-12 domain containing 3
EMC2 ER membrane protein complex subunit 2
ENKUR enkurin, TRPC channel interacting protein
EPSTI1 epithelial stromal interaction 1 (breast)
ERMAP erythroblast membrane-associated protein (Scianna blood group)
EVA1A eva-1 homolog A (C. elegans)
EVL Enah/Vasp-like
EXT1 exostosin glycosyltransferase 1
FAM169B family with sequence similarity 169, member B
FAM91A1 family with sequence similarity 91, member A1
FAM99A family with sequence similarity 99, member A (non-protein coding)
FBXL8 F-box and leucine-rich repeat protein 8
FBXO39 F-box protein 39
FGB fibrinogen beta chain
FKRP fukutin related protein
FLVCR2 feline leukemia virus subgroup C cellular receptor family, member 2
FNDC4 fibronectin type III domain containing 4
FOXD4L3 forkhead box D4-like 3
GBP1 guanylate binding protein 1, interferon-inducible
GFOD2 glucose-fructose oxidoreductase domain containing 2
GLIS3-AS1 GLIS3 antisense RNA 1
GORASP1 golgi reassembly stacking protein 1, 65kDa
GP9 glycoprotein IX (platelet)
GPR153 G protein-coupled receptor 153
GRAMD4 GRAM domain containing 4
GTPBP8 GTP-binding protein 8 (putative)
GUCD1 guanylyl cyclase domain containing 1
HAMP hepcidin antimicrobial peptide
HAPLN4 hyaluronan and proteoglycan link protein 4
HCG26 HLA complex group 26 (non-protein coding)
HELZ2 helicase with zinc finger 2, transcriptional coactivator
HERC6 HECT and RLD domain containing E3 ubiquitin protein ligase family member 6
HESX1 HESX homeobox 1
HIST1H2BC histone cluster 1, H2bc
HLA-C major histocompatibility complex, class I, C
HLA-DMA major histocompatibility complex, class II, DM alpha
HP haptoglobin
HRH4 histamine receptor H4
HRSP12 heat-responsive protein 12
HSP90AB4P heat shock protein 90kDa alpha (cytosolic), class B member 4, pseudogene
HSPBAP1 HSPB (heat shock 27kDa) associated protein 1
ID1 inhibitor of DNA binding 1, dominant negative helix-loop-helix protein
IFI27 interferon, alpha-inducible protein 27
IFI44 interferon-induced protein 44
IFI44L interferon-induced protein 44-like
IFI6 interferon, alpha-inducible protein 6
IFIT1 interferon-induced protein with tetratricopeptide repeats 1
IFNW1 interferon, omega 1
IFT43 intraflagellar transport 43
IHH indian hedgehog
IL32 interleukin 32
INSL5 insulin-like 5
IP6K3 inositol hexakisphosphate kinase 3
IRF9 interferon regulatory factor 9
KDM8 lysine (K)-specific demethylase 8
KIAA0141 KIAA0141
KIAA1191 KIAA1191
KNDC1 kinase non-catalytic C-lobe domain (KIND) containing 1
LACTB2 lactamase, beta 2
LAMP3 lysosomal-associated membrane protein 3
LAP3 leucine aminopeptidase 3
LBP lipopolysaccharide binding protein
LCA5L Leber congenital amaurosis 5-like
LINC00160 long intergenic non-protein coding RNA 160
LINC00264 long intergenic non-protein coding RNA 264
LINC00515 long intergenic non-protein coding RNA 515
LINC01554 long intergenic non-protein coding RNA 1554
LOC148413 uncharacterized LOC148413
LOC284009 uncharacterized LOC284009
LOC284788 uncharacterized LOC284788
LOC613037 nuclear pore complex interacting protein pseudogene
LOXHD1 lipoxygenase homology domains 1
LPA lipoprotein, Lp(a)
LPAL2 lipoprotein, Lp(a)-like 2, pseudogene
LRRC24 leucine rich repeat containing 24
LRRC6 leucine rich repeat containing 6
LSG1 large 60S subunit nuclear export GTPase 1
LY6E lymphocyte antigen 6 complex, locus E
LYN LYN proto-oncogene, Src family tyrosine kinase
MAP6D1 MAP6 domain containing 1
MAPK11 mitogen-activated protein kinase 11
MBD4 methyl-CpG binding domain protein 4
MBL1P mannose-binding lectin (protein A) 1, pseudogene
MFSD12 major facilitator superfamily domain containing 12
MFSD2A major facilitator superfamily domain containing 2A
MGC16142 uncharacterized protein MGC16142
MKX mohawk homeobox
MOCS1 molybdenum cofactor synthesis 1
MPC1 mitochondrial pyruvate carrier 1
MRPL13 mitochondrial ribosomal protein L13
MRPL22 mitochondrial ribosomal protein L22
MRPS18C mitochondrial ribosomal protein S18C
MRPS22 mitochondrial ribosomal protein S22
MRPS28 mitochondrial ribosomal protein S28
MRPS31 mitochondrial ribosomal protein S31
MT1X metallothionein 1X
MTERF3 mitochondrial transcription termination factor 3
MTFR1 mitochondrial fission regulator 1
MTG2 mitochondrial ribosome-associated GTPase 2
MX1 MX dynamin-like GTPase 1
MYOM1 myomesin 1
NADK NAD kinase
NEU2 sialidase 2 (cytosolic sialidase)
NFKBIB nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta
NIT2 nitrilase family, member 2
NNMT nicotinamide N-methyltransferase
NPAS4 neuronal PAS domain protein 4
NR1I2 nuclear receptor subfamily 1, group I, member 2
NRXN2 neurexin 2
NUP50 nucleoporin 50kDa
OAS1 2'-5'-oligoadenylate synthetase 1, 40/46kDa
OAS2 2'-5'-oligoadenylate synthetase 2, 69/71kDa
ODF3B outer dense fiber of sperm tails 3B
OMA1 OMA1 zinc metallopeptidase
OMG oligodendrocyte myelin glycoprotein
OR2A1 olfactory receptor, family 2, subfamily A, member 1
OR2F1 olfactory receptor, family 2, subfamily F, member 1 (gene/pseudogene)
OR7D2 olfactory receptor, family 7, subfamily D, member 2
ORM1 orosomucoid 1
OSBPL11 oxysterol binding protein-like 11
PARP14 poly (ADP-ribose) polymerase family, member 14
PARP6 poly (ADP-ribose) polymerase family, member 6
PARP9 poly (ADP-ribose) polymerase family, member 9
PC pyruvate carboxylase
PDE6H phosphodiesterase 6H, cGMP-specific, cone, gamma
PDRG1 p53 and DNA-damage regulated 1
PDZD9 PDZ domain containing 9
PEX2 peroxisomal biogenesis factor 2
PEX7 peroxisomal biogenesis factor 7
PHYKPL 5-phosphohydroxy-L-lysine phospho-lyase
PITPNB phosphatidylinositol transfer protein, beta
PLA2G2A phospholipase A2, group IIA (platelets, synovial fluid)
PLCH2 phospholipase C, eta 2
PLGLB2 plasminogen-like B2
PLSCR1 phospholipid scramblase 1
PMM2 phosphomannomutase 2
POLR2K polymerase (RNA) II (DNA directed) polypeptide K, 7.0kDa
PPM1J protein phosphatase, Mg2+/Mn2+ dependent, 1J
PPP2R1B protein phosphatase 2, regulatory subunit A, beta
PRSS53 protease, serine, 53
PSMB11 proteasome (prosome, macropain) subunit, beta type, 11
PSTPIP2 proline-serine-threonine phosphatase interacting protein 2
PTDSS1 phosphatidylserine synthase 1
PUS3 pseudouridylate synthase 3
RAB2A RAB2A, member RAS oncogene family
RAB7A RAB7A, member RAS oncogene family
RABL2B RAB, member of RAS oncogene family-like 2B
RARRES1 retinoic acid receptor responder (tazarotene induced) 1
RB1CC1 RB1-inducible coiled-coil 1
RIMKLB ribosomal modification protein rimK-like family member B
RMDN1 regulator of microtubule dynamics 1
RNF123 ring finger protein 123
RPL26L1 ribosomal protein L26-like 1
RPRD1B regulation of nuclear pre-mRNA domain containing 1B
RSPH4A radial spoke head 4 homolog A (Chlamydomonas)
S1PR3 sphingosine-1-phosphate receptor 3
SAA1 serum amyloid A1
SAA2 serum amyloid A2
SAMD12 sterile alpha motif domain containing 12
SBDSP1 Shwachman-Bodian-Diamond syndrome pseudogene 1
SCARNA21 small Cajal body-specific RNA 21
SDC4P syndecan 4 pseudogene
SELO selenoprotein O
SELT selenoprotein T
SERPINA10 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3
SH3BGR SH3 domain binding glutamate-rich protein
SHMT1 serine hydroxymethyltransferase 1 (soluble)
SLC1A1 solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1
SLC25A32 solute carrier family 25 (mitochondrial folate carrier), member 32
SLC25A47 solute carrier family 25, member 47
SLC35A5 solute carrier family 35, member A5
SLC35C1 solute carrier family 35 (GDP-fucose transporter), member C1
SMN1 survival of motor neuron 1, telomeric
SMOC1 SPARC related modular calcium binding 1
SNORA25 small nucleolar RNA, H/ACA box 25
SNORA51 small nucleolar RNA, H/ACA box 51
SNORA7B small nucleolar RNA, H/ACA box 7B
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)
SNX16 sorting nexin 16
SOCS1 suppressor of cytokine signaling 1
SOD2 superoxide dismutase 2, mitochondrial
SP100 SP100 nuclear antigen
SPR sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)
SSBP3 single stranded DNA binding protein 3
ST3GAL6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6
ST6GALNAC6 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
SUSD3 sushi domain containing 3
TBC1D29 TBC1 domain family, member 29
TDO2 tryptophan 2,3-dioxygenase
TERF1 telomeric repeat binding factor (NIMA-interacting) 1
TFG TRK-fused gene
TGM2 transglutaminase 2
THG1L tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)
THPO thrombopoietin
TMEM140 transmembrane protein 140
TMEM177 transmembrane protein 177
TMEM242 transmembrane protein 242
TMEM41A transmembrane protein 41A
TMOD1 tropomodulin 1
TOX thymocyte selection-associated high mobility group box
TP73-AS1 TP73 antisense RNA 1
TPRG1 tumor protein p63 regulated 1
TRIM21 tripartite motif containing 21
TRIM22 tripartite motif containing 22
TRIM41 tripartite motif containing 41
TRIM69 tripartite motif containing 69
TRIQK triple QxxK/R motif containing
TRPV1 transient receptor potential cation channel, subfamily V, member 1
TSNAX-DISC1 TSNAX-DISC1 readthrough (NMD candidate)
TTC21A tetratricopeptide repeat domain 21A
TTC38 tetratricopeptide repeat domain 38
TXNRD2 thioredoxin reductase 2
TYMP thymidine phosphorylase
UBA5 ubiquitin-like modifier activating enzyme 5
UBE2L6 ubiquitin-conjugating enzyme E2L 6
UBE2V2 ubiquitin-conjugating enzyme E2 variant 2
UCN urocortin
UMODL1 uromodulin-like 1
USP18 ubiquitin specific peptidase 18
VCPIP1 valosin containing protein (p97)/p47 complex interacting protein 1
VKORC1 vitamin K epoxide reductase complex, subunit 1
VNN3 vanin 3
VPS8 vacuolar protein sorting 8 homolog (S. cerevisiae)
WDR13 WD repeat domain 13
WNT8A wingless-type MMTV integration site family, member 8A
XAF1 XIAP associated factor 1
ZC3H13 zinc finger CCCH-type containing 13
ZFAND1 zinc finger, AN1-type domain 1
ZMYND12 zinc finger, MYND-type containing 12
ZNF252P zinc finger protein 252, pseudogene
ZNF684 zinc finger protein 684
ZNF707 zinc finger protein 707

low expression

Symbol Name
TBC1D9B TBC1 domain family, member 9B (with GRAM domain)