Liver hepatocellular carcinoma_LIHC_TCGA-GJ-A9DB-01A-11R-A37K-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Liver hepatocellular carcinoma_LIHC (The Cancer Genome Atlas)
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Genes

438 genes with high or low expression in Liver hepatocellular carcinoma_LIHC_TCGA-GJ-A9DB-01A-11R-A37K-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABI3BP ABI family, member 3 (NESH) binding protein
ACKR1 atypical chemokine receptor 1 (Duffy blood group)
ACOT12 acyl-CoA thioesterase 12
ADAMTS10 ADAM metallopeptidase with thrombospondin type 1 motif, 10
ADAMTS16 ADAM metallopeptidase with thrombospondin type 1 motif, 16
ADAMTS17 ADAM metallopeptidase with thrombospondin type 1 motif, 17
ADAMTS18 ADAM metallopeptidase with thrombospondin type 1 motif, 18
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6
ADAMTSL3 ADAMTS-like 3
ADAMTSL5 ADAMTS-like 5
AKR1C6P aldo-keto reductase family 1, member C6, pseudogene
AKR1C8P aldo-keto reductase family 1, member C8, pseudogene
ALDH7A1 aldehyde dehydrogenase 7 family, member A1
ALOX12P2 arachidonate 12-lipoxygenase pseudogene 2
ALOX15B arachidonate 15-lipoxygenase, type B
AMY2B amylase, alpha 2B (pancreatic)
ANKH ANKH inorganic pyrophosphate transport regulator
ANKRD34A ankyrin repeat domain 34A
ANP32A-IT1 ANP32A intronic transcript 1
APBB3 amyloid beta (A4) precursor protein-binding, family B, member 3
APC adenomatous polyposis coli
ARHGAP32 Rho GTPase activating protein 32
ARHGAP5-AS1 ARHGAP5 antisense RNA 1 (head to head)
ASAP3 ArfGAP with SH3 domain, ankyrin repeat and PH domain 3
ATG16L2 autophagy related 16-like 2 (S. cerevisiae)
ATOH7 atonal homolog 7 (Drosophila)
B3GNT9 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9
BAG4 BCL2-associated athanogene 4
BDNF-AS BDNF antisense RNA
BMS1P4 BMS1 ribosome biogenesis factor pseudogene 4
BRPF1 bromodomain and PHD finger containing, 1
BTD biotinidase
C10ORF12 chromosome 10 open reading frame 12
C10ORF128 chromosome 10 open reading frame 128
C11ORF42 chromosome 11 open reading frame 42
C16ORF45 chromosome 16 open reading frame 45
C16ORF86 chromosome 16 open reading frame 86
C19ORF12 chromosome 19 open reading frame 12
C19ORF71 chromosome 19 open reading frame 71
C1QL2 complement component 1, q subcomponent-like 2
C1QTNF9 C1q and tumor necrosis factor related protein 9
C2CD4A C2 calcium-dependent domain containing 4A
C2ORF66 chromosome 2 open reading frame 66
C6ORF201 chromosome 6 open reading frame 201
CACNG8 calcium channel, voltage-dependent, gamma subunit 8
CADM1 cell adhesion molecule 1
CALML6 calmodulin-like 6
CAMTA1 calmodulin binding transcription activator 1
CATSPERG catsper channel auxiliary subunit gamma
CBR4 carbonyl reductase 4
CCDC116 coiled-coil domain containing 116
CCDC171 coiled-coil domain containing 171
CCDC28B coiled-coil domain containing 28B
CCDC39 coiled-coil domain containing 39
CCDC82 coiled-coil domain containing 82
CCND1 cyclin D1
CDV3 CDV3 homolog (mouse)
CFL1P1 cofilin 1 (non-muscle) pseudogene 1
CGNL1 cingulin-like 1
CHKB-CPT1B CHKB-CPT1B readthrough (NMD candidate)
CLDN16 claudin 16
CLDN20 claudin 20
CLUHP3 clustered mitochondria (cluA/CLU1) homolog pseudogene 3
CNGA2 cyclic nucleotide gated channel alpha 2
CNKSR2 connector enhancer of kinase suppressor of Ras 2
CNTF ciliary neurotrophic factor
CNTN3 contactin 3 (plasmacytoma associated)
CNTNAP4 contactin associated protein-like 4
COMP cartilage oligomeric matrix protein
CORO2B coronin, actin binding protein, 2B
CPOX coproporphyrinogen oxidase
CPSF7 cleavage and polyadenylation specific factor 7, 59kDa
CROCCP3 ciliary rootlet coiled-coil, rootletin pseudogene 3
CRYBG3 beta-gamma crystallin domain containing 3
CSAG2 CSAG family, member 2
CSF2 colony stimulating factor 2 (granulocyte-macrophage)
CSMD3 CUB and Sushi multiple domains 3
CSRP2 cysteine and glycine-rich protein 2
CTNS cystinosin, lysosomal cystine transporter
DAPK2 death-associated protein kinase 2
DCAF4L2 DDB1 and CUL4 associated factor 4-like 2
DCAF8L1 DDB1 and CUL4 associated factor 8-like 1
DDB2 damage-specific DNA binding protein 2, 48kDa
DIO1 deiodinase, iodothyronine, type I
DNAAF2 dynein, axonemal, assembly factor 2
DNAH11 dynein, axonemal, heavy chain 11
DNAH7 dynein, axonemal, heavy chain 7
DNASE2B deoxyribonuclease II beta
DNHD1 dynein heavy chain domain 1
DPH1 diphthamide biosynthesis 1
DRGX dorsal root ganglia homeobox
DSCR3 Down syndrome critical region 3
DTNA dystrobrevin, alpha
DYNAP dynactin associated protein
EEF2K eukaryotic elongation factor 2 kinase
EGOT eosinophil granule ontogeny transcript (non-protein coding)
EME2 essential meiotic structure-specific endonuclease subunit 2
EML5 echinoderm microtubule associated protein like 5
ESPNP espin pseudogene
EVPLL envoplakin-like
FADS3 fatty acid desaturase 3
FAM118B family with sequence similarity 118, member B
FAM124B family with sequence similarity 124B
FAM178B family with sequence similarity 178, member B
FAM183B acyloxyacyl hydrolase (neutrophil)
FAM197Y2 family with sequence similarity 197, Y-linked, member 2, pseudogene
FAM212B family with sequence similarity 212, member B
FAM21A family with sequence similarity 21, member A
FAM221B family with sequence similarity 221, member B
FAM224B family with sequence similarity 224, member B (non-protein coding)
FAM45A family with sequence similarity 45, member A
FAM45B family with sequence similarity 45, member A pseudogene
FAM47C family with sequence similarity 47, member C
FAM71C family with sequence similarity 71, member C
FAM76B family with sequence similarity 76, member B
FAT2 FAT atypical cadherin 2
FBXO27 F-box protein 27
FGF18 fibroblast growth factor 18
FNIP1 folliculin interacting protein 1
FNIP2 folliculin interacting protein 2
FOXD4L5 forkhead box D4-like 5
FRMD6 FERM domain containing 6
FRMPD4 FERM and PDZ domain containing 4
FUZ fuzzy planar cell polarity protein
FZD4 frizzled class receptor 4
GABRA5 gamma-aminobutyric acid (GABA) A receptor, alpha 5
GABRR2 gamma-aminobutyric acid (GABA) A receptor, rho 2
GBP7 guanylate binding protein 7
GJC3 gap junction protein, gamma 3, 30.2kDa
GLRA1 glycine receptor, alpha 1
GMCL1P1 germ cell-less, spermatogenesis associated 1 pseudogene 1
GNAT1 guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1
GOLGA8IP golgin A8 family, member I, pseudogene
GPR137 G protein-coupled receptor 137
GPR152 G protein-coupled receptor 152
GPR17 G protein-coupled receptor 17
GRM8 glutamate receptor, metabotropic 8
GSTM2P1 glutathione S-transferase mu 2 (muscle) pseudogene 1
GSTT2 glutathione S-transferase theta 2 (gene/pseudogene)
GTF2H2C GTF2H2 family member C
GUSB glucuronidase, beta
GUSBP1 glucuronidase, beta pseudogene 1
HIST1H2BA histone cluster 1, H2ba
HORMAD2 HORMA domain containing 2
HOXA13 homeobox A13
HPS3 Hermansky-Pudlak syndrome 3
HTR3C 5-hydroxytryptamine (serotonin) receptor 3C, ionotropic
HUS1B HUS1 checkpoint homolog b (S. pombe)
ICAM5 intercellular adhesion molecule 5, telencephalin
IFFO1 intermediate filament family orphan 1
IFNA5 interferon, alpha 5
IL34 interleukin 34
IL36B interleukin 36, beta
IMPG2 interphotoreceptor matrix proteoglycan 2
INSL5 insulin-like 5
ISPD isoprenoid synthase domain containing
ITGAM integrin, alpha M (complement component 3 receptor 3 subunit)
KCNIP4-IT1 KCNIP4 intronic transcript 1
KCNK13 potassium channel, two pore domain subfamily K, member 13
KCNK4 potassium channel, two pore domain subfamily K, member 4
KCNN2 potassium channel, calcium activated intermediate/small conductance subfamily N alpha, member 2
KDM4A lysine (K)-specific demethylase 4A
KDM5D lysine (K)-specific demethylase 5D
KIAA0895L KIAA0895-like
KIAA1598
KLHL17 kelch-like family member 17
KLHL32 kelch-like family member 32
KLHL34 kelch-like family member 34
KLLN killin, p53-regulated DNA replication inhibitor
KPNA1 karyopherin alpha 1 (importin alpha 5)
KRT17 keratin 17, type I
KRT79 keratin 79, type II
KRT82 keratin 82, type II
KRTAP2-1 keratin associated protein 2-1
L3MBTL4 l(3)mbt-like 4 (Drosophila)
LAMP2 lysosomal-associated membrane protein 2
LINC00115 long intergenic non-protein coding RNA 115
LINC00240 long intergenic non-protein coding RNA 240
LINC00293 long intergenic non-protein coding RNA 293
LINC00574 long intergenic non-protein coding RNA 574
LINC01554 long intergenic non-protein coding RNA 1554
LMNTD2 lamin tail domain containing 2
LOC100132831 A20-binding inhibitor of NF-kappaB activation 2 pseudogene
LOC100272216 uncharacterized LOC100272216
LOC115110 uncharacterized LOC115110
LOC283856 uncharacterized LOC283856
LOC283922 pyruvate dehydrogenase phosphatase regulatory subunit pseudogene
LOC285593 uncharacterized LOC285593
LOC401463 uncharacterized LOC401463
LOC645752 golgin A6 family, member A pseudogene
LOC728989 phosphodiesterase 4D interacting protein pseudogene
LOC90834
LPIN3 lipin 3
LRFN5 leucine rich repeat and fibronectin type III domain containing 5
LRRC31 leucine rich repeat containing 31
LRRIQ4 leucine-rich repeats and IQ motif containing 4
LTB4R2 leukotriene B4 receptor 2
MAFA v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog A
MAGEA12 melanoma antigen family A12
MAGEA2 melanoma antigen family A2
MAGEB2 melanoma antigen family B2
MAGI1 membrane associated guanylate kinase, WW and PDZ domain containing 1
MAN2B2 mannosidase, alpha, class 2B, member 2
MAP3K15 mitogen-activated protein kinase kinase kinase 15
MAPK6 mitogen-activated protein kinase 6
MAPK8IP3 mitogen-activated protein kinase 8 interacting protein 3
MATN1 matrilin 1, cartilage matrix protein
MBL1P mannose-binding lectin (protein A) 1, pseudogene
MED14 mediator complex subunit 14
MEFV Mediterranean fever
METTL21C methyltransferase like 21C
MEX3B mex-3 RNA binding family member B
MFAP3L microfibrillar-associated protein 3-like
MFSD7 major facilitator superfamily domain containing 7
MGAT2 mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase
MMP17 matrix metallopeptidase 17 (membrane-inserted)
MMP3 matrix metallopeptidase 3
MMP7 matrix metallopeptidase 7
MOGAT1 monoacylglycerol O-acyltransferase 1
MOGAT3 monoacylglycerol O-acyltransferase 3
MRM1 mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae)
MTMR14 myotubularin related protein 14
MTNR1A melatonin receptor 1A
MTSS1L metastasis suppressor 1-like
MUC15 mucin 15, cell surface associated
MYO5A myosin VA (heavy chain 12, myoxin)
MZF1 myeloid zinc finger 1
NAALAD2 N-acetylated alpha-linked acidic dipeptidase 2
NBPF14 neuroblastoma breakpoint family, member 14
NBPF15 neuroblastoma breakpoint family, member 15
NBPF7 neuroblastoma breakpoint family, member 7
NBPF9 neuroblastoma breakpoint family, member 9
NCR3LG1 natural killer cell cytotoxicity receptor 3 ligand 1
NF1P1 neurofibromin 1 pseudogene 1
NHSL2 NHS-like 2
NKX3-2 NK3 homeobox 2
NLGN4X neuroligin 4, X-linked
NLRP1 NLR family, pyrin domain containing 1
NPFFR2 neuropeptide FF receptor 2
NRDE2 NRDE-2, necessary for RNA interference, domain containing
OGG1 8-oxoguanine DNA glycosylase
OMP olfactory marker protein
OR11H12 olfactory receptor, family 11, subfamily H, member 12
OR11H4 olfactory receptor, family 11, subfamily H, member 4
OR2AT4 olfactory receptor, family 2, subfamily AT, member 4
OR4F4 olfactory receptor, family 4, subfamily F, member 4
OR4M2 olfactory receptor, family 4, subfamily M, member 2
OR4N3P olfactory receptor, family 4, subfamily N, member 3 pseudogene
OR52I1 olfactory receptor, family 52, subfamily I, member 1
OR56A1 olfactory receptor, family 56, subfamily A, member 1
OR56B1 olfactory receptor, family 56, subfamily B, member 1
OR56B4 olfactory receptor, family 56, subfamily B, member 4
OR5B21 olfactory receptor, family 5, subfamily B, member 21
OR6B2 olfactory receptor, family 6, subfamily B, member 2
OR8A1 olfactory receptor, family 8, subfamily A, member 1
OR8B2 olfactory receptor, family 8, subfamily B, member 2
OR8D1 olfactory receptor, family 8, subfamily D, member 1
OR8G5 olfactory receptor, family 8, subfamily G, member 5
OTULIN OTU deubiquitinase with linear linkage specificity
P2RX3 purinergic receptor P2X, ligand gated ion channel, 3
PAQR3 progestin and adipoQ receptor family member III
PCDHA13 protocadherin alpha 13
PCDHAC1 protocadherin alpha subfamily C, 1
PCDHAC2 protocadherin alpha subfamily C, 2
PCSK4 proprotein convertase subtilisin/kexin type 4
PDC phosducin
PDE6A phosphodiesterase 6A, cGMP-specific, rod, alpha
PDIK1L PDLIM1 interacting kinase 1 like
PDP2 pyruvate dehyrogenase phosphatase catalytic subunit 2
PDZD7 PDZ domain containing 7
PFN1P2 profilin 1 pseudogene 2
PHAX phosphorylated adaptor for RNA export
PHKG1 phosphorylase kinase, gamma 1 (muscle)
PI4KAP1 phosphatidylinositol 4-kinase, catalytic, alpha pseudogene 1
PKD2L2 polycystic kidney disease 2-like 2
PKP2 plakophilin 2
PLCL2 phospholipase C-like 2
PLXDC2 plexin domain containing 2
PLXNC1 plexin C1
POTEF POTE ankyrin domain family, member F
POU5F2 POU domain class 5, transcription factor 2
PPM1L protein phosphatase, Mg2+/Mn2+ dependent, 1L
PPP2R2B protein phosphatase 2, regulatory subunit B, beta
PRICKLE4 prickle homolog 4 (Drosophila)
PRKD1 protein kinase D1
PRRT2 proline-rich transmembrane protein 2
PRRT3 proline-rich transmembrane protein 3
PRSS12 protease, serine, 12 (neurotrypsin, motopsin)
PRSS48 protease, serine, 48
PRY2 PTPN13-like, Y-linked 2
PSG11 pregnancy specific beta-1-glycoprotein 11
PSG2 pregnancy specific beta-1-glycoprotein 2
PSIP1 PC4 and SFRS1 interacting protein 1
PTEN phosphatase and tensin homolog
PTPN21 protein tyrosine phosphatase, non-receptor type 21
PTPN5 protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)
PTPRVP protein tyrosine phosphatase, receptor type, V, pseudogene
PXK PX domain containing serine/threonine kinase
RAET1K retinoic acid early transcript 1K pseudogene
RAPGEF4 Rap guanine nucleotide exchange factor (GEF) 4
RBMY2FP RNA binding motif protein, Y-linked, family 2, member F pseudogene
RCAN3 RCAN family member 3
RDH8 retinol dehydrogenase 8 (all-trans)
RELL2 RELT-like 2
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit
RFTN1 raftlin, lipid raft linker 1
RGAG4 retrotransposon gag domain containing 4
RGS9 regulator of G-protein signaling 9
RHBDL1 rhomboid, veinlet-like 1 (Drosophila)
RIMBP3 RIMS binding protein 3
RIOK3 RIO kinase 3
RNF207 ring finger protein 207
RNPC3 RNA-binding region (RNP1, RRM) containing 3
RPL23AP64 ribosomal protein L23a pseudogene 64
RRH retinal pigment epithelium-derived rhodopsin homolog
SAR1B secretion associated, Ras related GTPase 1B
SCN8A sodium channel, voltage gated, type VIII alpha subunit
SEPHS2 selenophosphate synthetase 2
SESN3 sestrin 3
SEZ6L2 seizure related 6 homolog (mouse)-like 2
SFMBT1 Scm-like with four mbt domains 1
SGIP1 SH3-domain GRB2-like (endophilin) interacting protein 1
SHC4 SHC (Src homology 2 domain containing) family, member 4
SHCBP1L SHC SH2-domain binding protein 1-like
SHROOM2 shroom family member 2
SIPA1L1 signal-induced proliferation-associated 1 like 1
SKIDA1 SKI/DACH domain containing 1
SKOR1 SKI family transcriptional corepressor 1
SLC16A13 solute carrier family 16, member 13
SLC30A4 solute carrier family 30 (zinc transporter), member 4
SLC36A3 solute carrier family 36, member 3
SLC38A7 solute carrier family 38, member 7
SLCO3A1 solute carrier organic anion transporter family, member 3A1
SLCO4C1 solute carrier organic anion transporter family, member 4C1
SLED1 proteoglycan 3 pseudogene
SLFNL1 schlafen-like 1
SMAD1 SMAD family member 1
SNAI2 snail family zinc finger 2
SNCAIP synuclein, alpha interacting protein
SNORA38B small nucleolar RNA, H/ACA box 38B
SNORA5C small nucleolar RNA, H/ACA box 5C
SNORA66 small nucleolar RNA, H/ACA box 66
SNORA71B small nucleolar RNA, H/ACA box 71B
SNX22 sorting nexin 22
SOBP sine oculis binding protein homolog (Drosophila)
SPAM1 sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)
SPANXC SPANX family, member C
SPANXN3 SPANX family, member N3
SPDYE5 speedy/RINGO cell cycle regulator family member E5
SPHK2 sphingosine kinase 2
SPTBN5 spectrin, beta, non-erythrocytic 5
SRR serine racemase
SSMEM1 serine-rich single-pass membrane protein 1
SSX3 synovial sarcoma, X breakpoint 3
ST8SIA4 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
STAC SH3 and cysteine rich domain
STARD4 StAR-related lipid transfer (START) domain containing 4
STX1B syntaxin 1B
STXBP5L syntaxin binding protein 5-like
SULF1 sulfatase 1
SULF2 sulfatase 2
SUN1 Sad1 and UNC84 domain containing 1
SUPT20HL2 suppressor of Ty 20 homolog (S. cerevisiae)-like 2
SYNGAP1 synaptic Ras GTPase activating protein 1
TACC1 transforming, acidic coiled-coil containing protein 1
TAS2R10 taste receptor, type 2, member 10
TBC1D3 TBC1 domain family, member 3
TBC1D9B TBC1 domain family, member 9B (with GRAM domain)
TBL1Y transducin (beta)-like 1, Y-linked
TBX6 T-box 6
TCHP trichoplein, keratin filament binding
TCL6 T-cell leukemia/lymphoma 6 (non-protein coding)
TCP11L1 t-complex 11, testis-specific-like 1
TEKT5 tektin 5
TEX40 testis expressed 40
TFDP3 transcription factor Dp family, member 3
THTPA thiamine triphosphatase
TIGD2 tigger transposable element derived 2
TINF2 TERF1 (TRF1)-interacting nuclear factor 2
TLR2 toll-like receptor 2
TMEM132D transmembrane protein 132D
TMEM150B transmembrane protein 150B
TMEM200C transmembrane protein 200C
TMEM231 transmembrane protein 231
TMEM241 transmembrane protein 241
TNFAIP8L1 tumor necrosis factor, alpha-induced protein 8-like 1
TNFAIP8L3 tumor necrosis factor, alpha-induced protein 8-like 3
TP53TG3B TP53 target 3B
TRAF3 TNF receptor-associated factor 3
TREH trehalase (brush-border membrane glycoprotein)
TRHDE thyrotropin-releasing hormone degrading enzyme
TRIM36 tripartite motif containing 36
TRIM41 tripartite motif containing 41
TRIM7 tripartite motif containing 7
TRIM78P tripartite motif containing 78, pseudogene
TRIML1 tripartite motif family-like 1
TRIML2 tripartite motif family-like 2
TRIO trio Rho guanine nucleotide exchange factor
TSGA13 testis specific, 13
TSPY1 testis specific protein, Y-linked 1
TSPY2 testis specific protein, Y-linked 2
TSPY3 testis specific protein, Y-linked 3
TSSK1B testis-specific serine kinase 1B
TSSK4 testis-specific serine kinase 4
TTC8 tetratricopeptide repeat domain 8
TTTY10 testis-specific transcript, Y-linked 10 (non-protein coding)
TTTY6 testis-specific transcript, Y-linked 6 (non-protein coding)
TUBGCP6 tubulin, gamma complex associated protein 6
TYR tyrosinase
UBTD2 ubiquitin domain containing 2
USP2 ubiquitin specific peptidase 2
USP26 ubiquitin specific peptidase 26
USP49 ubiquitin specific peptidase 49
USP54 ubiquitin specific peptidase 54
UTY ubiquitously transcribed tetratricopeptide repeat containing, Y-linked
UVSSA UV-stimulated scaffold protein A
VAMP1 vesicle-associated membrane protein 1 (synaptobrevin 1)
VAT1L vesicle amine transport 1-like
VCY variable charge, Y-linked
WDR11 WD repeat domain 11
WDR81 WD repeat domain 81
WFIKKN1 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1
WNT5A wingless-type MMTV integration site family, member 5A
YIPF1 Yip1 domain family, member 1
ZBTB1 zinc finger and BTB domain containing 1
ZBTB14 zinc finger and BTB domain containing 14
ZBTB25 zinc finger and BTB domain containing 25
ZFP91-CNTF ZFP91-CNTF readthrough (NMD candidate)
ZNF180 zinc finger protein 180
ZNF182 zinc finger protein 182
ZNF311 zinc finger protein 311
ZNF558 zinc finger protein 558
ZNF57 zinc finger protein 57
ZNF843 zinc finger protein 843
ZNF99 zinc finger protein 99
ZSCAN12P1 zinc finger and SCAN domain containing 12 pseudogene 1

low expression

Symbol Name
TFCP2 transcription factor CP2
TRIM13 tripartite motif containing 13