Liver hepatocellular carcinoma_LIHC_TCGA-G3-A25Y-01A-11R-A16W-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Liver hepatocellular carcinoma_LIHC (The Cancer Genome Atlas)
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Genes

402 genes with high or low expression in Liver hepatocellular carcinoma_LIHC_TCGA-G3-A25Y-01A-11R-A16W-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABHD17C abhydrolase domain containing 17C
ACTR3BP2 ACTR3B pseudogene 2
ACYP1 acylphosphatase 1, erythrocyte (common) type
ADAM7 ADAM metallopeptidase domain 7
ADORA2A adenosine A2a receptor
AEN apoptosis enhancing nuclease
AFAP1L1 actin filament associated protein 1-like 1
AGBL3 ATP/GTP binding protein-like 3
ALDH1A3 aldehyde dehydrogenase 1 family, member A3
ALOX5 arachidonate 5-lipoxygenase
ALS2CL ALS2 C-terminal like
ANGEL1 angel homolog 1 (Drosophila)
ANPEP alanyl (membrane) aminopeptidase
ANXA4 annexin A4
ARHGEF5 Rho guanine nucleotide exchange factor (GEF) 5
ARID3B AT rich interactive domain 3B (BRIGHT-like)
ARNT2 aryl-hydrocarbon receptor nuclear translocator 2
ARPIN actin-related protein 2/3 complex inhibitor
ASB12 ankyrin repeat and SOCS box containing 12
ASB18 ankyrin repeat and SOCS box containing 18
ATP12A ATPase, H+/K+ transporting, nongastric, alpha polypeptide
ATXN10 ataxin 10
B3GALT4 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 4
B4GALNT4 beta-1,4-N-acetyl-galactosaminyl transferase 4
BARHL1 BarH-like homeobox 1
BCL6B B-cell CLL/lymphoma 6, member B
BCL9L B-cell CLL/lymphoma 9-like
BCR breakpoint cluster region
BFSP1 beaded filament structural protein 1, filensin
BFSP2 beaded filament structural protein 2, phakinin
BLMH bleomycin hydrolase
BMP7 bone morphogenetic protein 7
BPIFA1 BPI fold containing family A, member 1
BPIFB1 BPI fold containing family B, member 1
BRD1 bromodomain containing 1
BTG2 BTG family, member 2
BUD13 BUD13 homolog (S. cerevisiae)
C11ORF45 chromosome 11 open reading frame 45
C14ORF169 chromosome 14 open reading frame 169
C15ORF39 chromosome 15 open reading frame 39
C19ORF26 chromosome 19 open reading frame 26
C1QL4 complement component 1, q subcomponent-like 4
C1QTNF2 C1q and tumor necrosis factor related protein 2
C9ORF106 chromosome 9 open reading frame 106
CA8 carbonic anhydrase VIII
CADPS Ca++-dependent secretion activator
CD276 CD276 molecule
CDC42EP1 CDC42 effector protein (Rho GTPase binding) 1
CDCA7 cell division cycle associated 7
CDH24 cadherin 24, type 2
CDK2 cyclin-dependent kinase 2
CDYL chromodomain protein, Y-like
CEBPA CCAAT/enhancer binding protein (C/EBP), alpha
CENPK centromere protein K
CGA glycoprotein hormones, alpha polypeptide
CHAF1B chromatin assembly factor 1, subunit B (p60)
CHD2 chromodomain helicase DNA binding protein 2
CHKB choline kinase beta
CHRNA10 cholinergic receptor, nicotinic, alpha 10 (neuronal)
CHST10 carbohydrate sulfotransferase 10
CLCN2 chloride channel, voltage-sensitive 2
CLDN10 claudin 10
CLN6 ceroid-lipofuscinosis, neuronal 6, late infantile, variant
CLUL1 clusterin-like 1 (retinal)
COL18A1-AS1 COL18A1 antisense RNA 1
CPD carboxypeptidase D
CPSF4L cleavage and polyadenylation specific factor 4-like
CRACR2A calcium release activated channel regulator 2A
CRTC3 CREB regulated transcription coactivator 3
CST2 cystatin SA
CST5 cystatin D
CYP3A7 cytochrome P450, family 3, subfamily A, polypeptide 7
CYP4F22 cytochrome P450, family 4, subfamily F, polypeptide 22
DAB2IP DAB2 interacting protein
DACT2 dishevelled-binding antagonist of beta-catenin 2
DBR1 debranching RNA lariats 1
DCAF4 DDB1 and CUL4 associated factor 4
DCC DCC netrin 1 receptor
DCPS decapping enzyme, scavenger
DEDD death effector domain containing
DEFB1 defensin, beta 1
DEFB118 defensin, beta 118
DET1 de-etiolated homolog 1 (Arabidopsis)
DHRS7 dehydrogenase/reductase (SDR family) member 7
DIRC1 disrupted in renal carcinoma 1
DKFZP434L187 uncharacterized LOC26082
DLL4 delta-like 4 (Drosophila)
DLX6 distal-less homeobox 6
DLX6-AS1 DLX6 antisense RNA 1
DRG1 developmentally regulated GTP binding protein 1
DUSP22 dual specificity phosphatase 22
DYM dymeclin
DZIP1L DAZ interacting zinc finger protein 1-like
EED embryonic ectoderm development
EFNA1 ephrin-A1
EFTUD1 elongation factor Tu GTP binding domain containing 1
EHF ets homologous factor
EIF1AD eukaryotic translation initiation factor 1A domain containing
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2
EIF4ENIF1 eukaryotic translation initiation factor 4E nuclear import factor 1
ERICH5 glutamate-rich 5
EWSAT1 Ewing sarcoma associated transcript 1
EXOC2 exocyst complex component 2
EXOC6 exocyst complex component 6
EXOG endo/exonuclease (5'-3'), endonuclease G-like
F11R F11 receptor
FAM103A1 family with sequence similarity 103, member A1
FAM109B family with sequence similarity 109, member B
FAM118A family with sequence similarity 118, member A
FAM131A family with sequence similarity 131, member A
FAM150A family with sequence similarity 150, member A
FAM19A5 family with sequence similarity 19 (chemokine (C-C motif)-like), member A5
FAM47A family with sequence similarity 47, member A
FAM76B family with sequence similarity 76, member B
FANCI Fanconi anemia, complementation group I
FARP1 FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)
FBXL21 F-box and leucine-rich repeat protein 21 (gene/pseudogene)
FBXO22 F-box protein 22
FBXO22-AS1 FBXO22 antisense RNA 1
FEN1 flap structure-specific endonuclease 1
FES FES proto-oncogene, tyrosine kinase
FGF4 fibroblast growth factor 4
FGFR2 fibroblast growth factor receptor 2
FRMPD1 FERM and PDZ domain containing 1
GABRG3 gamma-aminobutyric acid (GABA) A receptor, gamma 3
GALNT18 polypeptide N-acetylgalactosaminyltransferase 18
GAS7 growth arrest-specific 7
GFRA3 GDNF family receptor alpha 3
GJA4 gap junction protein, alpha 4, 37kDa
GJA5 gap junction protein, alpha 5, 40kDa
GJD2 gap junction protein, delta 2, 36kDa
GKAP1 G kinase anchoring protein 1
GLCE glucuronic acid epimerase
GLIS3 GLIS family zinc finger 3
GLT6D1 glycosyltransferase 6 domain containing 1
GMPS guanine monphosphate synthase
GOLPH3 golgi phosphoprotein 3 (coat-protein)
GORAB golgin, RAB6-interacting
GPBP1 GC-rich promoter binding protein 1
GPR148 G protein-coupled receptor 148
GPR183 G protein-coupled receptor 183
GPR32 G protein-coupled receptor 32
GPR4 G protein-coupled receptor 4
GPR68 G protein-coupled receptor 68
GPR89B G protein-coupled receptor 89B
GTF2A2 general transcription factor IIA, 2, 12kDa
GTF2E2 general transcription factor IIE, polypeptide 2, beta 34kDa
GTPBP1 GTP binding protein 1
H2AFY H2A histone family, member Y
HAS1 hyaluronan synthase 1
HAUS2 HAUS augmin-like complex, subunit 2
HEYL hes-related family bHLH transcription factor with YRPW motif-like
HHEX hematopoietically expressed homeobox
HIATL2 hippocampus abundant transcript-like 2
HMGXB4 HMG box domain containing 4
HNF1B HNF1 homeobox B
HNRNPL heterogeneous nuclear ribonucleoprotein L
HOMER2 homer scaffolding protein 2
HOXA10 homeobox A10
HOXA4 homeobox A4
HOXA5 homeobox A5
HOXB3 homeobox B3
HOXD1 homeobox D1
HOXD3 homeobox D3
HOXD4 homeobox D4
HPVC1 human papillomavirus (type 18) E5 central sequence-like 1
HYAL2 hyaluronoglucosaminidase 2
IDH2 isocitrate dehydrogenase 2 (NADP+), mitochondrial
IGF2 insulin-like growth factor 2
IGFBPL1 insulin-like growth factor binding protein-like 1
ILF2 interleukin enhancer binding factor 2
INF2 inverted formin, FH2 and WH2 domain containing
ISG20L2 interferon stimulated exonuclease gene 20kDa-like 2
ITIH2 inter-alpha-trypsin inhibitor heavy chain 2
JOSD1 Josephin domain containing 1
JPH1 junctophilin 1
KCNJ11 potassium channel, inwardly rectifying subfamily J, member 11
KCNK15 potassium channel, two pore domain subfamily K, member 15
KIAA1549L KIAA1549-like
KIRREL3 kin of IRRE like 3 (Drosophila)
KRTAP9-8 keratin associated protein 9-8
LAMA2 laminin, alpha 2
LAMC1 laminin, gamma 1 (formerly LAMB2)
LAMC3 laminin, gamma 3
LELP1 late cornified envelope-like proline-rich 1
LGALS9C lectin, galactoside-binding, soluble, 9C
LHFPL4 lipoma HMGIC fusion partner-like 4
LIMK2 LIM domain kinase 2
LINC00092 long intergenic non-protein coding RNA 92
LINC00293 long intergenic non-protein coding RNA 293
LINGO1 leucine rich repeat and Ig domain containing 1
LNX1 ligand of numb-protein X 1, E3 ubiquitin protein ligase
LOC221122 uncharacterized LOC221122
LOC283332 uncharacterized LOC283332
LOC341056 SUMO1 activating enzyme subunit 1 pseudogene
LOC402644 peptidylprolyl isomerase A (cyclophilin A) pseudogene
LRRC71 leucine rich repeat containing 71
LSM11 LSM11, U7 small nuclear RNA associated
MAMLD1 mastermind-like domain containing 1
MAP6 microtubule-associated protein 6
MARCH3 membrane-associated ring finger (C3HC4) 3, E3 ubiquitin protein ligase
MARK4 MAP/microtubule affinity-regulating kinase 4
MB21D2 Mab-21 domain containing 2
MCM5 minichromosome maintenance complex component 5
MCM6 minichromosome maintenance complex component 6
MED21 mediator complex subunit 21
MEF2D myocyte enhancer factor 2D
MEFV Mediterranean fever
METTL24 methyltransferase like 24
MEX3B mex-3 RNA binding family member B
MGP matrix Gla protein
MICALL1 MICAL-like 1
MMEL1 membrane metallo-endopeptidase-like 1
MMP26 matrix metallopeptidase 26
MORF4L1 mortality factor 4 like 1
MRPL50 mitochondrial ribosomal protein L50
MSL1 male-specific lethal 1 homolog (Drosophila)
MYCBPAP MYCBP associated protein
MYO10 myosin X
NALCN sodium leak channel, non selective
NCAPH2 non-SMC condensin II complex, subunit H2
NCK2 NCK adaptor protein 2
NGFR nerve growth factor receptor
NKD2 naked cuticle homolog 2 (Drosophila)
NLRX1 NLR family member X1
NOBOX NOBOX oogenesis homeobox
NOTCH1 notch 1
NOX3 NADPH oxidase 3
NPTN neuroplastin
NRXN3 neurexin 3
NUDT3 nudix (nucleoside diphosphate linked moiety X)-type motif 3
NUP50 nucleoporin 50kDa
OR10A7 olfactory receptor, family 10, subfamily A, member 7
OR10G4 olfactory receptor, family 10, subfamily G, member 4
OR10W1 olfactory receptor, family 10, subfamily W, member 1
OR1C1 olfactory receptor, family 1, subfamily C, member 1
OR2F2 olfactory receptor, family 2, subfamily F, member 2
OR2T3 olfactory receptor, family 2, subfamily T, member 3
OR4A5 olfactory receptor, family 4, subfamily A, member 5
OR4C46 olfactory receptor, family 4, subfamily C, member 46
OR4D9 olfactory receptor, family 4, subfamily D, member 9
OR52E8 olfactory receptor, family 52, subfamily E, member 8
OR56A1 olfactory receptor, family 56, subfamily A, member 1
OR6C75 olfactory receptor, family 6, subfamily C, member 75
OR6M1 olfactory receptor, family 6, subfamily M, member 1
OR6Q1 olfactory receptor, family 6, subfamily Q, member 1 (gene/pseudogene)
OR9I1 olfactory receptor, family 9, subfamily I, member 1
ORC1 origin recognition complex, subunit 1
OTOP3 otopetrin 3
OVOL2 ovo-like zinc finger 2
P4HTM prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)
PAQR6 progestin and adipoQ receptor family member VI
PASK PAS domain containing serine/threonine kinase
PCDHGB3 protocadherin gamma subfamily B, 3
PCDHGC4 protocadherin gamma subfamily C, 4
PCNA proliferating cell nuclear antigen
PCYOX1L prenylcysteine oxidase 1 like
PDX1 pancreatic and duodenal homeobox 1
PEAR1 platelet endothelial aggregation receptor 1
PHF5A PHD finger protein 5A
PIGC phosphatidylinositol glycan anchor biosynthesis, class C
PISD phosphatidylserine decarboxylase
PIWIL1 piwi-like RNA-mediated gene silencing 1
PKDCC protein kinase domain containing, cytoplasmic
PLA2G5 phospholipase A2, group V
PLEKHG4B pleckstrin homology domain containing, family G (with RhoGef domain) member 4B
PLXNB3 plexin B3
PMCHL2 pro-melanin-concentrating hormone-like 2, pseudogene
PNP purine nucleoside phosphorylase
POLD3 polymerase (DNA-directed), delta 3, accessory subunit
POLDIP3 polymerase (DNA-directed), delta interacting protein 3
POLG polymerase (DNA directed), gamma
POLR3GL polymerase (RNA) III (DNA directed) polypeptide G (32kD)-like
POM121L2 POM121 transmembrane nucleoporin-like 2
PPIC peptidylprolyl isomerase C (cyclophilin C)
PRAC2 prostate cancer susceptibility candidate 2
PRC1 protein regulator of cytokinesis 1
PRDM16 PR domain containing 16
PRKAB2 protein kinase, AMP-activated, beta 2 non-catalytic subunit
PRPF4B pre-mRNA processing factor 4B
PRR16 proline rich 16
PRRT1 proline-rich transmembrane protein 1
PRRT4 proline-rich transmembrane protein 4
PRSS16 protease, serine, 16 (thymus)
PTPN9 protein tyrosine phosphatase, non-receptor type 9
PTPRA protein tyrosine phosphatase, receptor type, A
RAB11A RAB11A, member RAS oncogene family
RAD1 RAD1 checkpoint DNA exonuclease
RANGAP1 Ran GTPase activating protein 1
RASAL1 RAS protein activator like 1 (GAP1 like)
RCCD1 RCC1 domain containing 1
RCE1 Ras converting CAAX endopeptidase 1
RFPL3S RFPL3 antisense
RGMA repulsive guidance molecule family member a
RIBC2 RIB43A domain with coiled-coils 2
RIC8B RIC8 guanine nucleotide exchange factor B
RNF24 ring finger protein 24
RRM1 ribonucleotide reductase M1
RRP7BP ribosomal RNA processing 7 homolog B (S. cerevisiae), pseudogene
RTN4R reticulon 4 receptor
RUSC1 RUN and SH3 domain containing 1
SCYL3 SCY1-like 3 (S. cerevisiae)
SDHAP1 succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 1
SDHAP2 succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 2
SEC11A SEC11 homolog A (S. cerevisiae)
SECTM1 secreted and transmembrane 1
SEMA4C sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C
SEMA5B sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B
SH3TC1 SH3 domain and tetratricopeptide repeats 1
SHISA3 shisa family member 3
SIGLEC12 sialic acid binding Ig-like lectin 12 (gene/pseudogene)
SIK2 salt-inducible kinase 2
SLBP stem-loop binding protein
SLC12A8 solute carrier family 12, member 8
SLC15A1 solute carrier family 15 (oligopeptide transporter), member 1
SLC26A2 solute carrier family 26 (anion exchanger), member 2
SLC46A2 solute carrier family 46, member 2
SLC5A1 solute carrier family 5 (sodium/glucose cotransporter), member 1
SLCO3A1 solute carrier organic anion transporter family, member 3A1
SMAD5 SMAD family member 5
SMTN smoothelin
SNAI1 snail family zinc finger 1
SNORA16A small nucleolar RNA, H/ACA box 16A
SOBP sine oculis binding protein homolog (Drosophila)
SOX9 SRY (sex determining region Y)-box 9
SPEF2 sperm flagellar 2
SPTB spectrin, beta, erythrocytic
SREBF2 sterol regulatory element binding transcription factor 2
STK33 serine/threonine kinase 33
SUB1 SUB1 homolog (S. cerevisiae)
SV2B synaptic vesicle glycoprotein 2B
SYNGR1 synaptogyrin 1
TAS2R30 taste receptor, type 2, member 30
TCF19 transcription factor 19
TDRD10 tudor domain containing 10
THSD7B thrombospondin, type I, domain containing 7B
TICRR TOPBP1-interacting checkpoint and replication regulator
TLE1 transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila)
TLN2 talin 2
TMC3 transmembrane channel-like 3
TMEM171 transmembrane protein 171
TMEM55B transmembrane protein 55B
TMEM61 transmembrane protein 61
TMPRSS12 transmembrane (C-terminal) protease, serine 12
TMPRSS3 transmembrane protease, serine 3
TNFAIP8L3 tumor necrosis factor, alpha-induced protein 8-like 3
TOB2 transducer of ERBB2, 2
TRIOBP TRIO and F-actin binding protein
TRNT1 tRNA nucleotidyl transferase, CCA-adding, 1
TRPV4 transient receptor potential cation channel, subfamily V, member 4
TTC23 tetratricopeptide repeat domain 23
TTC9C tetratricopeptide repeat domain 9C
TTYH1 tweety family member 1
TUFT1 tuftelin 1
TYMSOS TYMS opposite strand
UBE2Q2 ubiquitin-conjugating enzyme E2Q family member 2
UHRF2 ubiquitin-like with PHD and ring finger domains 2, E3 ubiquitin protein ligase
ULK3 unc-51 like kinase 3
ULK4P2 ULK4 pseudogene 2
UMODL1-AS1 UMODL1 antisense RNA 1
USP44 ubiquitin specific peptidase 44
VANGL2 VANGL planar cell polarity protein 2
VIMP VCP-interacting membrane selenoprotein
VN1R10P vomeronasal 1 receptor 10 pseudogene
VPS33B vacuolar protein sorting 33 homolog B (yeast)
VSX1 visual system homeobox 1
VWA9 von Willebrand factor A domain containing 9
WDR61 WD repeat domain 61
WHAMM WAS protein homolog associated with actin, golgi membranes and microtubules
WNK2 WNK lysine deficient protein kinase 2
XRCC3 X-ray repair complementing defective repair in Chinese hamster cells 3
XRCC6 X-ray repair complementing defective repair in Chinese hamster cells 6
YWHAH tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta
YY1AP1 YY1 associated protein 1
ZBED4 zinc finger, BED-type containing 4
ZBTB34 zinc finger and BTB domain containing 34
ZBTB49 zinc finger and BTB domain containing 49
ZBTB5 zinc finger and BTB domain containing 5
ZBTB9 zinc finger and BTB domain containing 9
ZCCHC13 zinc finger, CCHC domain containing 13
ZFP28 ZFP28 zinc finger protein
ZNF133 zinc finger protein 133
ZNF135 zinc finger protein 135
ZNF165 zinc finger protein 165
ZNF177 zinc finger protein 177
ZNF189 zinc finger protein 189
ZNF204P zinc finger protein 204, pseudogene
ZNF256 zinc finger protein 256
ZNF382 zinc finger protein 382
ZNF391 zinc finger protein 391
ZNF410 zinc finger protein 410
ZNF416 zinc finger protein 416
ZNF418 zinc finger protein 418
ZNF468 zinc finger protein 468
ZNF592 zinc finger protein 592
ZNF649 zinc finger protein 649
ZNF71 zinc finger protein 71
ZSCAN16 zinc finger and SCAN domain containing 16
ZSCAN2 zinc finger and SCAN domain containing 2
ZSCAN9 zinc finger and SCAN domain containing 9
ZWILCH zwilch kinetochore protein

low expression

Symbol Name
COX15 cytochrome c oxidase assembly homolog 15 (yeast)