Liver hepatocellular carcinoma_LIHC_TCGA-FV-A3R2-01A-11R-A22L-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Liver hepatocellular carcinoma_LIHC (The Cancer Genome Atlas)
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Genes

292 genes with high or low expression in Liver hepatocellular carcinoma_LIHC_TCGA-FV-A3R2-01A-11R-A22L-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABCF3 ATP-binding cassette, sub-family F (GCN20), member 3
ACOT4 acyl-CoA thioesterase 4
ACOT6 acyl-CoA thioesterase 6
ADAL adenosine deaminase-like
ADAMTS17 ADAM metallopeptidase with thrombospondin type 1 motif, 17
ADM2 adrenomedullin 2
AGGF1 angiogenic factor with G patch and FHA domains 1
AIMP2 aminoacyl tRNA synthetase complex-interacting multifunctional protein 2
AKAP14 A kinase (PRKA) anchor protein 14
AMIGO1 adhesion molecule with Ig-like domain 1
AMOTL2 angiomotin like 2
ANKRD28 ankyrin repeat domain 28
AP5S1 adaptor-related protein complex 5, sigma 1 subunit
APEH acylaminoacyl-peptide hydrolase
ARHGAP42 Rho GTPase activating protein 42
ARHGEF37 Rho guanine nucleotide exchange factor (GEF) 37
ARIH2 ariadne RBR E3 ubiquitin protein ligase 2
ARL8B ADP-ribosylation factor-like 8B
ARSK arylsulfatase family, member K
ASB13 ankyrin repeat and SOCS box containing 13
ASCC1 activating signal cointegrator 1 complex subunit 1
ATG3 autophagy related 3
ATRN attractin
BAP1 BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase)
BCAT2 branched chain amino-acid transaminase 2, mitochondrial
BTD biotinidase
C22ORF15 chromosome 22 open reading frame 15
C5ORF24 chromosome 5 open reading frame 24
C6ORF106 chromosome 6 open reading frame 106
CABLES1 Cdk5 and Abl enzyme substrate 1
CACHD1 cache domain containing 1
CACUL1 CDK2-associated, cullin domain 1
CAST calpastatin
CBX7 chromobox homolog 7
CCBL2 cysteine conjugate-beta lyase 2
CCDC69 coiled-coil domain containing 69
CCDC7 coiled-coil domain containing 7
CDS1 CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1
CDV3 CDV3 homolog (mouse)
CEP63 centrosomal protein 63kDa
CHCHD4 coiled-coil-helix-coiled-coil-helix domain containing 4
CLINT1 clathrin interactor 1
CNOT4 CCR4-NOT transcription complex, subunit 4
COL4A3BP collagen, type IV, alpha 3 (Goodpasture antigen) binding protein
COL7A1 collagen, type VII, alpha 1
CORO2B coronin, actin binding protein, 2B
CPN2 carboxypeptidase N, polypeptide 2
CPOX coproporphyrinogen oxidase
CSNK1A1 casein kinase 1, alpha 1
CSNK1G3 casein kinase 1, gamma 3
CTIF CBP80/20-dependent translation initiation factor
CTNS cystinosin, lysosomal cystine transporter
CXXC5 CXXC finger protein 5
CYP17A1 cytochrome P450, family 17, subfamily A, polypeptide 1
DAB1 Dab, reelin signal transducer, homolog 1 (Drosophila)
DAGLA diacylglycerol lipase, alpha
DHX29 DEAH (Asp-Glu-Ala-His) box polypeptide 29
DHX30 DEAH (Asp-Glu-Ala-His) box helicase 30
DLG1 discs, large homolog 1 (Drosophila)
DNAH11 dynein, axonemal, heavy chain 11
DNAJC13 DnaJ (Hsp40) homolog, subfamily C, member 13
DND1 DND microRNA-mediated repression inhibitor 1
DPP9 dipeptidyl-peptidase 9
DTWD2 DTW domain containing 2
EFHD1 EF-hand domain family, member D1
EIF2B5 eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa
EIF2S2 eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa
ELK1 ELK1, member of ETS oncogene family
ELP6 elongator acetyltransferase complex subunit 6
ERAP1 endoplasmic reticulum aminopeptidase 1
ERBB2IP erbb2 interacting protein
ERCC8 excision repair cross-complementation group 8
EYA1 EYA transcriptional coactivator and phosphatase 1
FAM13B family with sequence similarity 13, member B
FAM45B family with sequence similarity 45, member A pseudogene
FAM83D family with sequence similarity 83, member D
FAM83G family with sequence similarity 83, member G
FIBIN fin bud initiation factor homolog (zebrafish)
FITM2 fat storage-inducing transmembrane protein 2
FNIP1 folliculin interacting protein 1
FYCO1 FYVE and coiled-coil domain containing 1
FZD4 frizzled class receptor 4
GARS glycyl-tRNA synthetase
GATSL2 GATS protein-like 2
GFM1 G elongation factor, mitochondrial 1
GFRA4 GDNF family receptor alpha 4
GLIPR1L2 GLI pathogenesis-related 1 like 2
GOLGA4 golgin A4
GOLIM4 golgi integral membrane protein 4
GPER1 G protein-coupled estrogen receptor 1
GRAMD3 GRAM domain containing 3
GRPEL2 GrpE-like 2, mitochondrial (E. coli)
GSK3B glycogen synthase kinase 3 beta
GTF2IRD1 GTF2I repeat domain containing 1
GUSB glucuronidase, beta
HACL1 2-hydroxyacyl-CoA lyase 1
HIST1H4C histone cluster 1, H4c
HLTF helicase-like transcription factor
HMGCR 3-hydroxy-3-methylglutaryl-CoA reductase
HSPA4 heat shock 70kDa protein 4
HSPA9 heat shock 70kDa protein 9 (mortalin)
HYAL1 hyaluronoglucosaminidase 1
IFRD2 interferon-related developmental regulator 2
IP6K1 inositol hexakisphosphate kinase 1
IRAK2 interleukin-1 receptor-associated kinase 2
KCTD6 potassium channel tetramerization domain containing 6
KDM4A lysine (K)-specific demethylase 4A
KIAA1755 KIAA1755
KIF1B kinesin family member 1B
KIF1C kinesin family member 1C
KLHL21 kelch-like family member 21
KLHL24 kelch-like family member 24
KLHL34 kelch-like family member 34
LANCL2 LanC lantibiotic synthetase component C-like 2 (bacterial)
LARP1 La ribonucleoprotein domain family, member 1
LINC00115 long intergenic non-protein coding RNA 115
LINC00167 long intergenic non-protein coding RNA 167
LOC100133920 uncharacterized LOC100133920
LOC100270746 uncharacterized LOC100270746
LOC220729 succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene
LOC402644 peptidylprolyl isomerase A (cyclophilin A) pseudogene
LOC728323 uncharacterized LOC728323
LOC90784 uncharacterized LOC90784
LONP1 lon peptidase 1, mitochondrial
LRRC58 leucine rich repeat containing 58
LSG1 large 60S subunit nuclear export GTPase 1
LUC7L2 LUC7-like 2 (S. cerevisiae)
MAN1C1 mannosidase, alpha, class 1C, member 1
MAPKAPK3 mitogen-activated protein kinase-activated protein kinase 3
MARS methionyl-tRNA synthetase
MAVS mitochondrial antiviral signaling protein
MCUR1 mitochondrial calcium uniporter regulator 1
MIER3 mesoderm induction early response 1, family member 3
MINA MYC induced nuclear antigen
MKNK2 MAP kinase interacting serine/threonine kinase 2
MKRN2 makorin ring finger protein 2
MKX mohawk homeobox
MOCS1 molybdenum cofactor synthesis 1
MOCS2 molybdenum cofactor synthesis 2
MON1A MON1 secretory trafficking family member A
MROH8 maestro heat-like repeat family member 8
MRPS22 mitochondrial ribosomal protein S22
MSH3 mutS homolog 3
MTMR14 myotubularin related protein 14
MYLK myosin light chain kinase
MYRIP myosin VIIA and Rab interacting protein
NANP N-acetylneuraminic acid phosphatase
NCR3LG1 natural killer cell cytotoxicity receptor 3 ligand 1
NDST1 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
NGLY1 N-glycanase 1
NPR2 natriuretic peptide receptor 2
NUDT16 nudix (nucleoside diphosphate linked moiety X)-type motif 16
NUDT9 nudix (nucleoside diphosphate linked moiety X)-type motif 9
NYNRIN NYN domain and retroviral integrase containing
OGG1 8-oxoguanine DNA glycosylase
OMP olfactory marker protein
OPALIN oligodendrocytic myelin paranodal and inner loop protein
OR10J1 olfactory receptor, family 10, subfamily J, member 1
OR52M1 olfactory receptor, family 52, subfamily M, member 1
OXNAD1 oxidoreductase NAD-binding domain containing 1
P2RX3 purinergic receptor P2X, ligand gated ion channel, 3
PAPLN papilin, proteoglycan-like sulfated glycoprotein
PBRM1 polybromo 1
PCDHAC2 protocadherin alpha subfamily C, 2
PCOLCE2 procollagen C-endopeptidase enhancer 2
PDCD6IP programmed cell death 6 interacting protein
PDE12 phosphodiesterase 12
PEX26 peroxisomal biogenesis factor 26
PGPEP1 pyroglutamyl-peptidase I
PHGDH phosphoglycerate dehydrogenase
PIGO phosphatidylinositol glycan anchor biosynthesis, class O
PIK3CB phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta
PLCG1 phospholipase C, gamma 1
PLCL2 phospholipase C-like 2
PMS2 PMS2 postmeiotic segregation increased 2 (S. cerevisiae)
PNRC2 proline-rich nuclear receptor coactivator 2
POLR3H polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)
POMGNT2 protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-)
PPBPP2 pro-platelet basic protein pseudogene 2
PPM1L protein phosphatase, Mg2+/Mn2+ dependent, 1L
PRKAR2A protein kinase, cAMP-dependent, regulatory, type II, alpha
PRKD1 protein kinase D1
PRODH proline dehydrogenase (oxidase) 1
PSAT1 phosphoserine aminotransferase 1
PTPRD protein tyrosine phosphatase, receptor type, D
PXK PX domain containing serine/threonine kinase
PXMP4 peroxisomal membrane protein 4, 24kDa
RAB43 RAB43, member RAS oncogene family
RAB7A RAB7A, member RAS oncogene family
RABEP1 rabaptin, RAB GTPase binding effector protein 1
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1
RAF1 Raf-1 proto-oncogene, serine/threonine kinase
RAP1GDS1 RAP1, GTP-GDP dissociation stimulator 1
RBM15B RNA binding motif protein 15B
RBSN rabenosyn, RAB effector
RGAG4 retrotransposon gag domain containing 4
RGPD8 RANBP2-like and GRIP domain containing 8
RHOBTB3 Rho-related BTB domain containing 3
RNF10 ring finger protein 10
RNF123 ring finger protein 123
RNF187 ring finger protein 187
RPP14 ribonuclease P/MRP 14kDa subunit
RTEL1 regulator of telomere elongation helicase 1
RTP3 receptor (chemosensory) transporter protein 3
RUFY1 RUN and FYVE domain containing 1
SARS seryl-tRNA synthetase
SBF1 SET binding factor 1
SEC22C SEC22 vesicle trafficking protein homolog C (S. cerevisiae)
SEMA3B sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B
SEPT11 septin 11
SESN2 sestrin 2
SETD2 SET domain containing 2
SFMBT1 Scm-like with four mbt domains 1
SGK3 serum/glucocorticoid regulated kinase family, member 3
SHPK sedoheptulokinase
SLC25A38 solute carrier family 25, member 38
SLC30A2 solute carrier family 30 (zinc transporter), member 2
SLC30A4 solute carrier family 30 (zinc transporter), member 4
SLC35A4 solute carrier family 35, member A4
SLC35F6 solute carrier family 35, member F6
SLC4A2 solute carrier family 4 (anion exchanger), member 2
SLC6A9 solute carrier family 6 (neurotransmitter transporter, glycine), member 9
SNX2 sorting nexin 2
SP100 SP100 nuclear antigen
SPDYE3 speedy/RINGO cell cycle regulator family member E3
SPTSSA serine palmitoyltransferase, small subunit A
ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1
STAG3L1 stromal antigen 3-like 1 (pseudogene)
STAG3L2 stromal antigen 3-like 2 (pseudogene)
STAG3L4 stromal antigen 3-like 4 (pseudogene)
STK38 serine/threonine kinase 38
SYPL2 synaptophysin-like 2
TAF9 TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa
TBC1D20 TBC1 domain family, member 20
TBC1D23 TBC1 domain family, member 23
TBC1D9B TBC1 domain family, member 9B (with GRAM domain)
TBL1Y transducin (beta)-like 1, Y-linked
TCEA1 transcription elongation factor A (SII), 1
TDGF1 teratocarcinoma-derived growth factor 1
TDGF1P3 teratocarcinoma-derived growth factor 1 pseudogene 3
TECPR1 tectonin beta-propeller repeat containing 1
TEF thyrotrophic embryonic factor
TFRC transferrin receptor
TGFBI transforming growth factor, beta-induced, 68kDa
THUMPD3 THUMP domain containing 3
TLN2 talin 2
TMEM115 transmembrane protein 115
TMIE transmembrane inner ear
TNFAIP8L1 tumor necrosis factor, alpha-induced protein 8-like 1
TNPO3 transportin 3
TOMM70A translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae)
TOX2 TOX high mobility group box family member 2
TRAF3 TNF receptor-associated factor 3
TRAM2 translocation associated membrane protein 2
TRIB3 tribbles pseudokinase 3
TRPC5 transient receptor potential cation channel, subfamily C, member 5
TTC37 tetratricopeptide repeat domain 37
TTTY14 testis-specific transcript, Y-linked 14 (non-protein coding)
TTTY6 testis-specific transcript, Y-linked 6 (non-protein coding)
TTTY9B testis-specific transcript, Y-linked 9B (non-protein coding)
TXNDC15 thioredoxin domain containing 15
TXNRD3NB thioredoxin reductase 3 neighbor
UBIAD1 UbiA prenyltransferase domain containing 1
UBP1 upstream binding protein 1 (LBP-1a)
UBR4 ubiquitin protein ligase E3 component n-recognin 4
ULK4 unc-51 like kinase 4
USP19 ubiquitin specific peptidase 19
VHL von Hippel-Lindau tumor suppressor, E3 ubiquitin protein ligase
VPRBP Vpr (HIV-1) binding protein
WDR41 WD repeat domain 41
WDR55 WD repeat domain 55
WDR82 WD repeat domain 82
WLS wntless Wnt ligand secretion mediator
WNT5A wingless-type MMTV integration site family, member 5A
XPC xeroderma pigmentosum, complementation group C
XPOT exportin, tRNA
YARS tyrosyl-tRNA synthetase
ZDHHC23 zinc finger, DHHC-type containing 23
ZFAND3 zinc finger, AN1-type domain 3
ZFYVE1 zinc finger, FYVE domain containing 1
ZFYVE9 zinc finger, FYVE domain containing 9
ZHX3 zinc fingers and homeoboxes 3
ZNF148 zinc finger protein 148
ZNF197 zinc finger protein 197
ZNF512B zinc finger protein 512B
ZNF69 zinc finger protein 69
ZNF697 zinc finger protein 697

low expression

Symbol Name
ATG5 autophagy related 5
COG7 component of oligomeric golgi complex 7
FIG4 FIG4 phosphoinositide 5-phosphatase
PARN poly(A)-specific ribonuclease
SURF4 surfeit 4