Liver hepatocellular carcinoma_LIHC_TCGA-EP-A3JL-01A-11R-A213-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Liver hepatocellular carcinoma_LIHC (The Cancer Genome Atlas)
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Genes

309 genes with high or low expression in Liver hepatocellular carcinoma_LIHC_TCGA-EP-A3JL-01A-11R-A213-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
A2ML1 alpha-2-macroglobulin-like 1
ABHD11 abhydrolase domain containing 11
ACKR1 atypical chemokine receptor 1 (Duffy blood group)
ADCK1 aarF domain containing kinase 1
ADCK5 aarF domain containing kinase 5
AGPAT6 1-acylglycerol-3-phosphate O-acyltransferase 6
AKR1B15 aldo-keto reductase family 1, member B15
AKR1C6P aldo-keto reductase family 1, member C6, pseudogene
AMDHD2 amidohydrolase domain containing 2
ANO2 anoctamin 2, calcium activated chloride channel
APEX2 APEX nuclease (apurinic/apyrimidinic endonuclease) 2
APOA1BP apolipoprotein A-I binding protein
APOO apolipoprotein O
ARF1 ADP-ribosylation factor 1
ARL8A ADP-ribosylation factor-like 8A
ASCL4 achaete-scute family bHLH transcription factor 4
ASH2L ash2 (absent, small, or homeotic)-like (Drosophila)
ATP6V1C1 ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1
BCAP31 B-cell receptor-associated protein 31
BRD9 bromodomain containing 9
BRF2 BRF2, RNA polymerase III transcription initiation factor 50 kDa subunit
BRIX1 BRX1, biogenesis of ribosomes
C16ORF46 chromosome 16 open reading frame 46
C17ORF59 chromosome 17 open reading frame 59
C1ORF110 chromosome 1 open reading frame 110
C1ORF35 chromosome 1 open reading frame 35
C1ORF56 chromosome 1 open reading frame 56
C20ORF24 chromosome 20 open reading frame 24
C7ORF43 chromosome 7 open reading frame 43
C7ORF50 chromosome 7 open reading frame 50
C8ORF33 chromosome 8 open reading frame 33
C8ORF59 chromosome 8 open reading frame 59
C8ORF76 chromosome 8 open reading frame 76
C9ORF114 chromosome 9 open reading frame 114
C9ORF139 chromosome 9 open reading frame 139
CABS1 calcium-binding protein, spermatid-specific 1
CALR calreticulin
CAPZA3 capping protein (actin filament) muscle Z-line, alpha 3
CCDC127 coiled-coil domain containing 127
CCDC185 coiled-coil domain containing 185
CCDC22 coiled-coil domain containing 22
CCL27 chemokine (C-C motif) ligand 27
CCT3 chaperonin containing TCP1, subunit 3 (gamma)
CCT5 chaperonin containing TCP1, subunit 5 (epsilon)
CD200 CD200 molecule
CDK5RAP1 CDK5 regulatory subunit associated protein 1
CEP112 centrosomal protein 112kDa
CFAP46 cilia and flagella associated protein 46
CHDH choline dehydrogenase
CLCA4 chloride channel accessory 4
CLPTM1L CLPTM1-like
COMMD5 COMM domain containing 5
COMMD7 COMM domain containing 7
CORO2B coronin, actin binding protein, 2B
CORO7 coronin 7
COX6C cytochrome c oxidase subunit VIc
CRX cone-rod homeobox
CST9 cystatin 9 (testatin)
CTSA cathepsin A
CXORF40B chromosome X open reading frame 40B
CYC1 cytochrome c-1
DAP death-associated protein
DAP3 death associated protein 3
DCAF13 DDB1 and CUL4 associated factor 13
DDC dopa decarboxylase (aromatic L-amino acid decarboxylase)
DECR2 2,4-dienoyl CoA reductase 2, peroxisomal
DEF8 differentially expressed in FDCP 8 homolog (mouse)
DEFB129 defensin, beta 129
DEPTOR DEP domain containing MTOR-interacting protein
DIRC1 disrupted in renal carcinoma 1
DNAJC15 DnaJ (Hsp40) homolog, subfamily C, member 15
DNM1P35 dynamin 1 pseudogene 35
DUS2 dihydrouridine synthase 2
DYNLL1 dynein, light chain, LC8-type 1
EBI3 Epstein-Barr virus induced 3
EBP emopamil binding protein (sterol isomerase)
EDEM2 ER degradation enhancer, mannosidase alpha-like 2
EIF4EBP1 eukaryotic translation initiation factor 4E binding protein 1
EMC2 ER membrane protein complex subunit 2
EMCN endomucin
ENTPD6 ectonucleoside triphosphate diphosphohydrolase 6 (putative)
ENY2 enhancer of yellow 2 homolog (Drosophila)
EQTN equatorin, sperm acrosome associated
EXOC3 exocyst complex component 3
FAM110D family with sequence similarity 110, member D
FAM124A family with sequence similarity 124A
FAM155B family with sequence similarity 155, member B
FAM173B family with sequence similarity 173, member B
FAM222A family with sequence similarity 222, member A
FAM223B family with sequence similarity 223, member B (non-protein coding)
FAM47B family with sequence similarity 47, member B
FAM47C family with sequence similarity 47, member C
FAM78B family with sequence similarity 78, member B
FAM83H family with sequence similarity 83, member H
FASTKD3 FAST kinase domains 3
FBXL18 F-box and leucine-rich repeat protein 18
FCRL6 Fc receptor-like 6
FGL1 fibrinogen-like 1
FH fumarate hydratase
FNTA farnesyltransferase, CAAX box, alpha
FUK fucokinase
GAS8-AS1 GAS8 antisense RNA 1
GJB1 gap junction protein, beta 1, 32kDa
GOLGA7 golgin A7
GPAA1 glycosylphosphatidylinositol anchor attachment 1
GPC3 glypican 3
GPX2 glutathione peroxidase 2
GRINA glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)
GRIPAP1 GRIP1 associated protein 1
GSN gelsolin
GUCY2EP guanylate cyclase 2E, pseudogene
GUK1 guanylate kinase 1
HGH1 HGH1 homolog (S. cerevisiae)
HLA-DQB1 major histocompatibility complex, class II, DQ beta 1
HLA-DRB1 major histocompatibility complex, class II, DR beta 1
HLA-DRB5 major histocompatibility complex, class II, DR beta 5
HLA-G major histocompatibility complex, class I, G
HMOX2 heme oxygenase 2
HPVC1 human papillomavirus (type 18) E5 central sequence-like 1
HPYR1 Helicobacter pylori responsive 1 (non-protein coding)
HUS1 HUS1 checkpoint homolog (S. pombe)
HYAL4 hyaluronoglucosaminidase 4
IFFO1 intermediate filament family orphan 1
IFITM3 interferon induced transmembrane protein 3
IKBKB inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta
IKBKG inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma
IL22 interleukin 22
IL26 interleukin 26
IL3RA interleukin 3 receptor, alpha (low affinity)
IRAK1 interleukin-1 receptor-associated kinase 1
JMJD4 jumonji domain containing 4
JMJD8 jumonji domain containing 8
JPH1 junctophilin 1
KDELR2 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2
KIAA1875 KIAA1875
KRT13 keratin 13, type I
KRT27 keratin 27, type I
KRTAP8-1 keratin associated protein 8-1
LAS1L LAS1-like (S. cerevisiae)
LCN6 lipocalin 6
LGR6 leucine-rich repeat containing G protein-coupled receptor 6
LHFPL4 lipoma HMGIC fusion partner-like 4
LINC00161 long intergenic non-protein coding RNA 161
LINC00303 long intergenic non-protein coding RNA 303
LINC00467 long intergenic non-protein coding RNA 467
LINC01599 long intergenic non-protein coding RNA 1599
LOC100128542
LONP1 lon peptidase 1, mitochondrial
LRRC10 leucine rich repeat containing 10
LRRC14 leucine rich repeat containing 14
LRRC30 leucine rich repeat containing 30
LSM1 LSM1, U6 small nuclear RNA associated
LTBR lymphotoxin beta receptor (TNFR superfamily, member 3)
LYPLAL1 lysophospholipase-like 1
MAGIX MAGI family member, X-linked
MAGOHB mago-nashi homolog B (Drosophila)
MANF mesencephalic astrocyte-derived neurotrophic factor
MDH2 malate dehydrogenase 2, NAD (mitochondrial)
MED10 mediator complex subunit 10
MFSD3 major facilitator superfamily domain containing 3
MOSPD1 motile sperm domain containing 1
MRPL13 mitochondrial ribosomal protein L13
MRPL24 mitochondrial ribosomal protein L24
MRPL32 mitochondrial ribosomal protein L32
MRPL36 mitochondrial ribosomal protein L36
MRPS26 mitochondrial ribosomal protein S26
MRPS28 mitochondrial ribosomal protein S28
MRPS30 mitochondrial ribosomal protein S30
MSI1 musashi RNA-binding protein 1
MSTO1 misato 1, mitochondrial distribution and morphology regulator
MTERF3 mitochondrial transcription termination factor 3
MTHFSD methenyltetrahydrofolate synthetase domain containing
MYPN myopalladin
NAA20 N(alpha)-acetyltransferase 20, NatB catalytic subunit
NAGPA N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase
NANOS2 nanos homolog 2 (Drosophila)
NDUFAF6 NADH dehydrogenase (ubiquinone) complex I, assembly factor 6
NECAB3 N-terminal EF-hand calcium binding protein 3
NKAP NFKB activating protein
NMRAL1 NmrA-like family domain containing 1
NOX5 NADPH oxidase, EF-hand calcium binding domain 5
NQO1 NAD(P)H dehydrogenase, quinone 1
NSDHL NAD(P) dependent steroid dehydrogenase-like
NSMCE2 non-SMC element 2, MMS21 homolog (S. cerevisiae)
NSMF NMDA receptor synaptonuclear signaling and neuronal migration factor
NSUN2 NOP2/Sun RNA methyltransferase family, member 2
OGFR opioid growth factor receptor
OPLAH 5-oxoprolinase (ATP-hydrolysing)
OR10J3 olfactory receptor, family 10, subfamily J, member 3
OR10K1 olfactory receptor, family 10, subfamily K, member 1
OR13J1 olfactory receptor, family 13, subfamily J, member 1
OR1N1 olfactory receptor, family 1, subfamily N, member 1
OR2L1P olfactory receptor, family 2, subfamily L, member 1 pseudogene
OR2T4 olfactory receptor, family 2, subfamily T, member 4
OR3A4P olfactory receptor, family 3, subfamily A, member 4 pseudogene
OR52B2 olfactory receptor, family 52, subfamily B, member 2
OR52K2 olfactory receptor, family 52, subfamily K, member 2
OR5C1 olfactory receptor, family 5, subfamily C, member 1
OR6N1 olfactory receptor, family 6, subfamily N, member 1
OSGIN1 oxidative stress induced growth inhibitor 1
OTUD6A OTU deubiquitinase 6A
PAIP1 poly(A) binding protein interacting protein 1
PARP10 poly (ADP-ribose) polymerase family, member 10
PDCD6 programmed cell death 6
PDHA1 pyruvate dehydrogenase (lipoamide) alpha 1
PDIA4 protein disulfide isomerase family A, member 4
PDRG1 p53 and DNA-damage regulated 1
PDZK1IP1 PDZK1 interacting protein 1
PEX10 peroxisomal biogenesis factor 10
PFDN2 prefoldin subunit 2
PHF11 PHD finger protein 11
PIN4 peptidylprolyl cis/trans isomerase, NIMA-interacting 4
PIR pirin (iron-binding nuclear protein)
PLEKHG6 pleckstrin homology domain containing, family G (with RhoGef domain) member 6
PLOD3 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3
PMS2P1 postmeiotic segregation increased 2 pseudogene 1
PMS2P2 postmeiotic segregation increased 2 pseudogene 2
PNKD paroxysmal nonkinesigenic dyskinesia
POLB polymerase (DNA directed), beta
POLR2E polymerase (RNA) II (DNA directed) polypeptide E, 25kDa
POLR2K polymerase (RNA) II (DNA directed) polypeptide K, 7.0kDa
POTEB POTE ankyrin domain family, member B
PRAP1 proline-rich acidic protein 1
PRDX4 peroxiredoxin 4
PRM2 protamine 2
PRR19 proline rich 19
PSMA3 proteasome (prosome, macropain) subunit, alpha type, 3
PSMA7 proteasome (prosome, macropain) subunit, alpha type, 7
PTCD1 pentatricopeptide repeat domain 1
PUF60 poly-U binding splicing factor 60KDa
PXMP4 peroxisomal membrane protein 4, 24kDa
PYCR2 pyrroline-5-carboxylate reductase family, member 2
PYCRL pyrroline-5-carboxylate reductase-like
R3HDML R3H domain containing-like
RAB40AL RAB40A, member RAS oncogene family-like
RANBP17 RAN binding protein 17
RBCK1 RanBP-type and C3HC4-type zinc finger containing 1
RBM3 RNA binding motif (RNP1, RRM) protein 3
REM1 RAS (RAD and GEM)-like GTP-binding 1
RHEB Ras homolog enriched in brain
RHOD ras homolog family member D
RNASE13 ribonuclease, RNase A family, 13 (non-active)
RNPEP arginyl aminopeptidase (aminopeptidase B)
RNU4ATAC RNA, U4atac small nuclear (U12-dependent splicing)
RRP15 ribosomal RNA processing 15 homolog (S. cerevisiae)
SCARNA17 small Cajal body-specific RNA 17
SCGB2B2 secretoglobin, family 2B, member 2
SCGB3A2 secretoglobin, family 3A, member 2
SCRIB scribbled planar cell polarity protein
SDHA succinate dehydrogenase complex, subunit A, flavoprotein (Fp)
SERPINE3 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3
SFTPA1 surfactant protein A1
SFTPA2 surfactant protein A2
SFTPB surfactant protein B
SFTPC surfactant protein C
SHARPIN SHANK-associated RH domain interactor
SIGLEC16 sialic acid binding Ig-like lectin 16 (gene/pseudogene)
SLC25A5 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5
SLC35G5 solute carrier family 35, member G5
SLC36A3 solute carrier family 36, member 3
SMIM19 small integral membrane protein 19
SMS spermine synthase
SNORA38B small nucleolar RNA, H/ACA box 38B
SNORA62 small nucleolar RNA, H/ACA box 62
SNORA71A small nucleolar RNA, H/ACA box 71A
SOAT2 sterol O-acyltransferase 2
SOX17 SRY (sex determining region Y)-box 17
SPAM1 sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)
SPRR2C small proline-rich protein 2C (pseudogene)
SPRYD7 SPRY domain containing 7
STAC3 SH3 and cysteine rich domain 3
STOML1 stomatin (EPB72)-like 1
STPG2 sperm-tail PG-rich repeat containing 2
SUB1 SUB1 homolog (S. cerevisiae)
TAPBPL TAP binding protein-like
TAZ tafazzin
TCEB3B transcription elongation factor B polypeptide 3B (elongin A2)
TFB2M transcription factor B2, mitochondrial
TFE3 transcription factor binding to IGHM enhancer 3
TM2D2 TM2 domain containing 2
TMCO1 transmembrane and coiled-coil domains 1
TMEM106C transmembrane protein 106C
TMEM187 transmembrane protein 187
TMEM9 transmembrane protein 9
TMPRSS11BNL TMPRSS11B N-terminal like, pseudogene
TNFSF14 tumor necrosis factor (ligand) superfamily, member 14
TOP1P1 topoisomerase (DNA) I pseudogene 1
TP53TG1 TP53 target 1 (non-protein coding)
TRAPPC9 trafficking protein particle complex 9
TRIM16 tripartite motif containing 16
TRMT61A tRNA methyltransferase 61A
TSR2 TSR2, 20S rRNA accumulation, homolog (S. cerevisiae)
TTBK1 tau tubulin kinase 1
UBL4A ubiquitin-like 4A
UGT3A1 UDP glycosyltransferase 3 family, polypeptide A1
VDAC3 voltage-dependent anion channel 3
VSIG10L V-set and immunoglobulin domain containing 10 like
VWA1 von Willebrand factor A domain containing 1
WBSCR16 Williams-Beuren syndrome chromosome region 16
WBSCR28 Williams-Beuren syndrome chromosome region 28
WDR45 WD repeat domain 45
WT1-AS WT1 antisense RNA
ZC3H3 zinc finger CCCH-type containing 3
ZC4H2 zinc finger, C4H2 domain containing
ZNF622 zinc finger protein 622
ZNF672 zinc finger protein 672
ZNF683 zinc finger protein 683
ZNF706 zinc finger protein 706

low expression

Symbol Name
TMEM214 transmembrane protein 214