Liver hepatocellular carcinoma_LIHC_TCGA-DD-A73F-01A-11R-A32O-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Liver hepatocellular carcinoma_LIHC (The Cancer Genome Atlas)
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Genes

398 genes with high or low expression in Liver hepatocellular carcinoma_LIHC_TCGA-DD-A73F-01A-11R-A32O-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
AAMP angio-associated, migratory cell protein
ABCC6P1 ATP-binding cassette, sub-family C, member 6 pseudogene 1 (functional)
ABCG5 ATP-binding cassette, sub-family G (WHITE), member 5
ACACB acetyl-CoA carboxylase beta
ACBD7 acyl-CoA binding domain containing 7
ACSS2 acyl-CoA synthetase short-chain family member 2
ADAD2 adenosine deaminase domain containing 2
ADAMTS18 ADAM metallopeptidase with thrombospondin type 1 motif, 18
ADAMTS5 ADAM metallopeptidase with thrombospondin type 1 motif, 5
ADCY9 adenylate cyclase 9
AEN apoptosis enhancing nuclease
AFF1 AF4/FMR2 family, member 1
AGAP2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 2
AGBL2 ATP/GTP binding protein-like 2
AJUBA ajuba LIM protein
AKR1D1 aldo-keto reductase family 1, member D1
ALB albumin
ALDH7A1 aldehyde dehydrogenase 7 family, member A1
ANK1 ankyrin 1, erythrocytic
ANKRD30BL ankyrin repeat domain 30B-like
ANO2 anoctamin 2, calcium activated chloride channel
AP1B1 adaptor-related protein complex 1, beta 1 subunit
APOBEC3G apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G
APOBEC3H apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H
APOL3 apolipoprotein L, 3
APOL6 apolipoprotein L, 6
ARL10 ADP-ribosylation factor-like 10
ARL17A ADP-ribosylation factor-like 17A
ARL4D ADP-ribosylation factor-like 4D
ARNTL aryl hydrocarbon receptor nuclear translocator-like
ARSJ arylsulfatase family, member J
ASB9 ankyrin repeat and SOCS box containing 9
ASXL3 additional sex combs like transcriptional regulator 3
ASZ1 ankyrin repeat, SAM and basic leucine zipper domain containing 1
ATP6V0D1 ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1
ATRNL1 attractin-like 1
BBS7 Bardet-Biedl syndrome 7
BCAT2 branched chain amino-acid transaminase 2, mitochondrial
BCL2L10 BCL2-like 10 (apoptosis facilitator)
BDH2 3-hydroxybutyrate dehydrogenase, type 2
BMP2K BMP2 inducible kinase
BTN3A3 butyrophilin, subfamily 3, member A3
C11ORF21 chromosome 11 open reading frame 21
C15ORF54 chromosome 15 open reading frame 54
C19ORF38 chromosome 19 open reading frame 38
C4ORF19 chromosome 4 open reading frame 19
C5ORF58 chromosome 5 open reading frame 58
C9ORF139 chromosome 9 open reading frame 139
CA5BP1 carbonic anhydrase VB pseudogene 1
CAPN11 calpain 11
CASC5 cancer susceptibility candidate 5
CASP1 caspase 1, apoptosis-related cysteine peptidase
CBS cystathionine-beta-synthase
CCDC36 coiled-coil domain containing 36
CCDC69 coiled-coil domain containing 69
CCNA2 cyclin A2
CCR10 chemokine (C-C motif) receptor 10
CCR5 chemokine (C-C motif) receptor 5 (gene/pseudogene)
CCR8 chemokine (C-C motif) receptor 8
CD3G CD3g molecule, gamma (CD3-TCR complex)
CD40LG CD40 ligand
CD5 CD5 molecule
CD6 CD6 molecule
CD84 CD84 molecule
CD8A CD8a molecule
CD8B CD8b molecule
CD96 CD96 molecule
CECR1 cat eye syndrome chromosome region, candidate 1
CELA1 chymotrypsin-like elastase family, member 1
CES4A carboxylesterase 4A
CHAC1 ChaC glutathione-specific gamma-glutamylcyclotransferase 1
CLEC9A C-type lectin domain family 9, member A
CNGB1 cyclic nucleotide gated channel beta 1
CNP 2',3'-cyclic nucleotide 3' phosphodiesterase
CNTD1 cyclin N-terminal domain containing 1
COL4A4 collagen, type IV, alpha 4
COQ10A coenzyme Q10 homolog A (S. cerevisiae)
COQ2 coenzyme Q2 4-hydroxybenzoate polyprenyltransferase
CPXCR1 CPX chromosome region, candidate 1
CROT carnitine O-octanoyltransferase
CSAG1 chondrosarcoma associated gene 1
CSAG2 CSAG family, member 2
CSTA cystatin A (stefin A)
CTSW cathepsin W
CXCL9 chemokine (C-X-C motif) ligand 9
CXCR3 chemokine (C-X-C motif) receptor 3
CXCR6 chemokine (C-X-C motif) receptor 6
CXORF65 chromosome X open reading frame 65
CYLD cylindromatosis (turban tumor syndrome)
DCANP1 dendritic cell-associated nuclear protein
DCC DCC netrin 1 receptor
DDX4 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4
DMRTB1 DMRT-like family B with proline-rich C-terminal, 1
DOCK10 dedicator of cytokinesis 10
DPP9 dipeptidyl-peptidase 9
DPYD dihydropyrimidine dehydrogenase
DTX4 deltex 4, E3 ubiquitin ligase
DUS2 dihydrouridine synthase 2
DUSP26 dual specificity phosphatase 26 (putative)
DYM dymeclin
DYSF dysferlin
EI24 etoposide induced 2.4
ENTPD7 ectonucleoside triphosphate diphosphohydrolase 7
EOMES eomesodermin
EP300 E1A binding protein p300
ERC2 ELKS/RAB6-interacting/CAST family member 2
ETNPPL ethanolamine-phosphate phospho-lyase
ETV3L ets variant 3-like
F13B coagulation factor XIII, B polypeptide
FADS2 fatty acid desaturase 2
FAM157B family with sequence similarity 157, member B
FAM49A family with sequence similarity 49, member A
FAM83D family with sequence similarity 83, member D
FASLG Fas ligand (TNF superfamily, member 6)
FAT3 FAT atypical cadherin 3
FBXL13 F-box and leucine-rich repeat protein 13
FCRL6 Fc receptor-like 6
FEM1A fem-1 homolog a (C. elegans)
FMO1 flavin containing monooxygenase 1
FOXD4L3 forkhead box D4-like 3
FSTL5 follistatin-like 5
FZD4 frizzled class receptor 4
GAB4 GRB2-associated binding protein family, member 4
GAGE1 G antigen 1
GAGE10 G antigen 10
GAGE12J G antigen 12J
GAGE13 G antigen 13
GAGE2B G antigen 2B
GAGE2C G antigen 2C
GAGE2D G antigen 2D
GAGE4 G antigen 4
GBP4 guanylate binding protein 4
GBX1 gastrulation brain homeobox 1
GFM2 G elongation factor, mitochondrial 2
GLDC glycine dehydrogenase (decarboxylating)
GLS2 glutaminase 2 (liver, mitochondrial)
GNAT1 guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1
GPAT2 glycerol-3-phosphate acyltransferase 2, mitochondrial
GPATCH1 G patch domain containing 1
GPR174 G protein-coupled receptor 174
GPR31 G protein-coupled receptor 31
GPR88 G protein-coupled receptor 88
GPX7 glutathione peroxidase 7
GSTA1 glutathione S-transferase alpha 1
GSTA5 glutathione S-transferase alpha 5
GTF2H2B general transcription factor IIH, polypeptide 2B (pseudogene)
GTF2H2C GTF2H2 family member C
GZMA granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)
GZMH granzyme H (cathepsin G-like 2, protein h-CCPX)
H1F0 H1 histone family, member 0
H1FOO H1 histone family, member O, oocyte-specific
HCP5 HLA complex P5 (non-protein coding)
HIST1H2AG histone cluster 1, H2ag
HIST1H3A histone cluster 1, H3a
HIST1H3B histone cluster 1, H3b
HIST1H4F histone cluster 1, H4f
HLA-C major histocompatibility complex, class I, C
HLA-DQA1 major histocompatibility complex, class II, DQ alpha 1
HLTF helicase-like transcription factor
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)
HORMAD2 HORMA domain containing 2
HSD11B2 hydroxysteroid (11-beta) dehydrogenase 2
HSD17B10 hydroxysteroid (17-beta) dehydrogenase 10
HSD17B6 hydroxysteroid (17-beta) dehydrogenase 6
HYDIN HYDIN, axonemal central pair apparatus protein
IFNG interferon, gamma
IFNL1 interferon, lambda 1
IKZF3 IKAROS family zinc finger 3 (Aiolos)
IL12RB1 interleukin 12 receptor, beta 1
IL20RB interleukin 20 receptor beta
IL21 interleukin 21
IQCF6 IQ motif containing F6
IRF9 interferon regulatory factor 9
IRGM immunity-related GTPase family, M
ISPD isoprenoid synthase domain containing
ITGAL integrin, alpha L (antigen CD11A (p180), lymphocyte function-associated antigen 1; alpha polypeptide)
ITGB2 integrin, beta 2 (complement component 3 receptor 3 and 4 subunit)
ITK IL2-inducible T-cell kinase
ITPK1 inositol-tetrakisphosphate 1-kinase
JAKMIP1 janus kinase and microtubule interacting protein 1
JAZF1 JAZF zinc finger 1
KIAA2022 KIAA2022
KLHL13 kelch-like family member 13
KLHL23 kelch-like family member 23
KLK2 kallikrein-related peptidase 2
KLK3 kallikrein-related peptidase 3
KLRD1 killer cell lectin-like receptor subfamily D, member 1
KLRK1 killer cell lectin-like receptor subfamily K, member 1
KRTAP11-1 keratin associated protein 11-1
KRTAP8-1 keratin associated protein 8-1
LAT linker for activation of T cells
LCE1E late cornified envelope 1E
LCK LCK proto-oncogene, Src family tyrosine kinase
LINC00293 long intergenic non-protein coding RNA 293
LOC100268168 uncharacterized LOC100268168
LOC143188 uncharacterized LOC143188
LOC389705 chromosome 4 open reading frame 27 pseudogene
LOC494141 solute carrier family 25, member 51 pseudogene
LOC644669 ankyrin repeat domain 30B pseudogene
LPPR4 lipid phosphate phosphatase-related protein type 4
LRRC29 leucine rich repeat containing 29
LTB4R2 leukotriene B4 receptor 2
LUZP4 leucine zipper protein 4
MAGEA12 melanoma antigen family A12
MAOB monoamine oxidase B
MAP4K2 mitogen-activated protein kinase kinase kinase kinase 2
MAT2A methionine adenosyltransferase II, alpha
MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2
MED14 mediator complex subunit 14
MEI1 meiosis inhibitor 1
MGAT2 mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase
MGC15885 uncharacterized protein MGC15885
MICAL3 microtubule associated monooxygenase, calponin and LIM domain containing 3
MIR22HG MIR22 host gene
MPV17L MPV17 mitochondrial membrane protein-like
MSX2P1 msh homeobox 2 pseudogene 1
MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase
MTHFS 5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)
MUT methylmalonyl CoA mutase
MYBPC1 myosin binding protein C, slow type
NANOS2 nanos homolog 2 (Drosophila)
NANS N-acetylneuraminic acid synthase
NEFH neurofilament, heavy polypeptide
NFATC2 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2
NKX3-2 NK3 homeobox 2
NLGN4X neuroligin 4, X-linked
NLRC3 NLR family, CARD domain containing 3
NLRC5 NLR family, CARD domain containing 5
NOP9 NOP9 nucleolar protein
NOTO notochord homeobox
NPBWR1 neuropeptides B/W receptor 1
NPY neuropeptide Y
NRN1L neuritin 1-like
NUBP1 nucleotide binding protein 1
NWD2 NACHT and WD repeat domain containing 2
OPALIN oligodendrocytic myelin paranodal and inner loop protein
OR10J3 olfactory receptor, family 10, subfamily J, member 3
OR1J1 olfactory receptor, family 1, subfamily J, member 1
OR2T34 olfactory receptor, family 2, subfamily T, member 34
OR4Q3 olfactory receptor, family 4, subfamily Q, member 3
OR51Q1 olfactory receptor, family 51, subfamily Q, member 1 (gene/pseudogene)
OR52I2 olfactory receptor, family 52, subfamily I, member 2
OR5K1 olfactory receptor, family 5, subfamily K, member 1
OSBPL6 oxysterol binding protein-like 6
OSTCP1 oligosaccharyltransferase complex subunit pseudogene 1
OTC ornithine carbamoyltransferase
OTUD6A OTU deubiquitinase 6A
PARM1 prostate androgen-regulated mucin-like protein 1
PBOV1 prostate and breast cancer overexpressed 1
PCED1B PC-esterase domain containing 1B
PDE6C phosphodiesterase 6C, cGMP-specific, cone, alpha prime
PDE6G phosphodiesterase 6G, cGMP-specific, rod, gamma
PDXDC1 pyridoxal-dependent decarboxylase domain containing 1
PDYN prodynorphin
PECR peroxisomal trans-2-enoyl-CoA reductase
PGAM4 phosphoglycerate mutase family member 4
PHF2P1 PHD finger protein 2 pseudogene 1
PIK3CD-AS1 PIK3CD antisense RNA 1
PITPNM2 phosphatidylinositol transfer protein, membrane-associated 2
PLCD4 phospholipase C, delta 4
PLCXD1 phosphatidylinositol-specific phospholipase C, X domain containing 1
PLEKHG4 pleckstrin homology domain containing, family G (with RhoGef domain) member 4
PLXNC1 plexin C1
PNMA5 paraneoplastic Ma antigen family member 5
PODXL2 podocalyxin-like 2
POTEF POTE ankyrin domain family, member F
PPM1E protein phosphatase, Mg2+/Mn2+ dependent, 1E
PPP2R2B protein phosphatase 2, regulatory subunit B, beta
PRAMEF10 PRAME family member 10
PRAMEF11 PRAME family member 11
PRAMEF5 PRAME family member 5
PRAMEF6 PRAME family member 6
PRKCE protein kinase C, epsilon
PRPH2 peripherin 2 (retinal degeneration, slow)
PRR19 proline rich 19
PRR23A proline rich 23A
PRR25 proline rich 25
PRRG4 proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)
PSAT1 phosphoserine aminotransferase 1
PSMB10 proteasome (prosome, macropain) subunit, beta type, 10
PSME1 proteasome (prosome, macropain) activator subunit 1 (PA28 alpha)
PSME2 proteasome (prosome, macropain) activator subunit 2 (PA28 beta)
PTCHD1 patched domain containing 1
PTGDR prostaglandin D2 receptor (DP)
PTPN20 protein tyrosine phosphatase, non-receptor type 20
PVRIG poliovirus receptor related immunoglobulin domain containing
PXMP4 peroxisomal membrane protein 4, 24kDa
RABGGTA Rab geranylgeranyltransferase, alpha subunit
RACGAP1P Rac GTPase activating protein 1 pseudogene
RAD9B RAD9 homolog B (S. pombe)
RAPH1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1
RASGRF2 Ras protein-specific guanine nucleotide-releasing factor 2
RASSF3 Ras association (RalGDS/AF-6) domain family member 3
RGAG1 retrotransposon gag domain containing 1
RGAG4 retrotransposon gag domain containing 4
RNF138P1 ring finger protein 138, E3 ubiquitin protein ligase pseudogene 1
RNF17 ring finger protein 17
RNF185 ring finger protein 185
RNF213 ring finger protein 213
RNF31 ring finger protein 31
RPL10L ribosomal protein L10-like
RPS6KB2 ribosomal protein S6 kinase, 70kDa, polypeptide 2
RTP3 receptor (chemosensory) transporter protein 3
SAMD3 sterile alpha motif domain containing 3
SCYL2 SCY1-like 2 (S. cerevisiae)
SEL1L2 sel-1 suppressor of lin-12-like 2 (C. elegans)
SEPT1 septin 1
SEPT6 septin 6
SERPINA7 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 7
SESN2 sestrin 2
SFMBT1 Scm-like with four mbt domains 1
SGSM3 small G protein signaling modulator 3
SH3PXD2A SH3 and PX domains 2A
SHPK sedoheptulokinase
SIRPG signal-regulatory protein gamma
SIT1 signaling threshold regulating transmembrane adaptor 1
SLC10A6 solute carrier family 10 (sodium/bile acid cotransporter), member 6
SLC22A7 solute carrier family 22 (organic anion transporter), member 7
SLC23A1 solute carrier family 23 (ascorbic acid transporter), member 1
SLC30A4 solute carrier family 30 (zinc transporter), member 4
SLC45A3 solute carrier family 45, member 3
SLC7A5 solute carrier family 7 (amino acid transporter light chain, L system), member 5
SLCO4C1 solute carrier organic anion transporter family, member 4C1
SLCO6A1 solute carrier organic anion transporter family, member 6A1
SLFN12L schlafen family member 12-like
SMC1A structural maintenance of chromosomes 1A
SMC1B structural maintenance of chromosomes 1B
SNORA2A small nucleolar RNA, H/ACA box 2A
SNX20 sorting nexin 20
SPATA31C1 SPATA31 subfamily C, member 1
SPATA31E1 SPATA31 subfamily E, member 1
SPC24 SPC24, NDC80 kinetochore complex component
SPHK2 sphingosine kinase 2
SRD5A2 steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)
SSC4D scavenger receptor cysteine rich family, 4 domains
SSX1 synovial sarcoma, X breakpoint 1
SSX7 synovial sarcoma, X breakpoint 7
ST20-AS1 ST20 antisense RNA 1
STAG3 stromal antigen 3
STARD4 StAR-related lipid transfer (START) domain containing 4
STAT1 signal transducer and activator of transcription 1, 91kDa
STAT2 signal transducer and activator of transcription 2, 113kDa
STX17 syntaxin 17
SUPT20HL2 suppressor of Ty 20 homolog (S. cerevisiae)-like 2
SYCE2 synaptonemal complex central element protein 2
SYNE3 spectrin repeat containing, nuclear envelope family member 3
SYNGR3 synaptogyrin 3
SYPL2 synaptophysin-like 2
TAGAP T-cell activation RhoGTPase activating protein
TBC1D29 TBC1 domain family, member 29
TCAM1P testicular cell adhesion molecule 1, pseudogene
TDRD7 tudor domain containing 7
TDRD9 tudor domain containing 9
TEX11 testis expressed 11
TEX37 testis expressed 37
TFDP3 transcription factor Dp family, member 3
THEMIS thymocyte selection associated
TINF2 TERF1 (TRF1)-interacting nuclear factor 2
TMEM106A transmembrane protein 106A
TMEM14E transmembrane protein 14E
TMEM217 transmembrane protein 217
TMEM232 transmembrane protein 232
TMPRSS6 transmembrane protease, serine 6
TP53INP2 tumor protein p53 inducible nuclear protein 2
TRIM14 tripartite motif containing 14
TRIM22 tripartite motif containing 22
TRPM5 transient receptor potential cation channel, subfamily M, member 5
TSC2 tuberous sclerosis 2
TUB tubby bipartite transcription factor
TVP23A trans-golgi network vesicle protein 23 homolog A (S. cerevisiae)
UBA7 ubiquitin-like modifier activating enzyme 7
UBASH3A ubiquitin associated and SH3 domain containing A
UBE2NL ubiquitin-conjugating enzyme E2N-like (gene/pseudogene)
UBXN2B UBX domain protein 2B
UPB1 ureidopropionase, beta
USH2A Usher syndrome 2A (autosomal recessive, mild)
USP7 ubiquitin specific peptidase 7 (herpes virus-associated)
VAX1 ventral anterior homeobox 1
VTI1A vesicle transport through interaction with t-SNAREs 1A
WNK3 WNK lysine deficient protein kinase 3
XCR1 chemokine (C motif) receptor 1
XK X-linked Kx blood group
YBX2 Y box binding protein 2
YY2 YY2 transcription factor
ZAP70 zeta-chain (TCR) associated protein kinase 70kDa
ZBED6CL ZBED6 C-terminal like
ZFR2 zinc finger RNA binding protein 2
ZNF595 zinc finger protein 595
ZNF598 zinc finger protein 598
ZNF679 zinc finger protein 679
ZNF683 zinc finger protein 683
ZNF781 zinc finger protein 781
ZNF80 zinc finger protein 80
ZNF804B zinc finger protein 804B
ZNF831 zinc finger protein 831
ZNF883 zinc finger protein 883
ZSCAN30 zinc finger and SCAN domain containing 30

low expression

Symbol Name
ZDHHC4 zinc finger, DHHC-type containing 4