Liver hepatocellular carcinoma_LIHC_TCGA-DD-A1EG-11A-11R-A213-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Liver hepatocellular carcinoma_LIHC (The Cancer Genome Atlas)
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Genes

319 genes with high or low expression in Liver hepatocellular carcinoma_LIHC_TCGA-DD-A1EG-11A-11R-A213-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
AADAT aminoadipate aminotransferase
ACAA1 acetyl-CoA acyltransferase 1
ACADS acyl-CoA dehydrogenase, C-2 to C-3 short chain
ACOT12 acyl-CoA thioesterase 12
ACSM3 acyl-CoA synthetase medium-chain family member 3
ADAM20 ADAM metallopeptidase domain 20
ADAMTS1 ADAM metallopeptidase with thrombospondin type 1 motif, 1
AGXT alanine-glyoxylate aminotransferase
ALB albumin
ALDH2 aldehyde dehydrogenase 2 family (mitochondrial)
AMDHD1 amidohydrolase domain containing 1
ANG angiogenin, ribonuclease, RNase A family, 5
ANKRD55 ankyrin repeat domain 55
ANP32D acidic (leucine-rich) nuclear phosphoprotein 32 family, member D
ANXA10 annexin A10
APOA1 apolipoprotein A-I
APOBEC3A apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A
APOC3 apolipoprotein C-III
APOF apolipoprotein F
AQP3 aquaporin 3 (Gill blood group)
AQP7 aquaporin 7
AQP7P1 aquaporin 7 pseudogene 1
AQP7P3 aquaporin 7 pseudogene 3
ASPA aspartoacylase
ASS1 argininosuccinate synthase 1
AZGP1 alpha-2-glycoprotein 1, zinc-binding
BCKDHB branched chain keto acid dehydrogenase E1, beta polypeptide
BCL3 B-cell CLL/lymphoma 3
BDH2 3-hydroxybutyrate dehydrogenase, type 2
BHLHE40 basic helix-loop-helix family, member e40
BLID BH3-like motif containing, cell death inducer
BMP15 bone morphogenetic protein 15
BTBD19 BTB (POZ) domain containing 19
C10ORF10 chromosome 10 open reading frame 10
C17ORF98 chromosome 17 open reading frame 98
C1ORF68 chromosome 1 open reading frame 68
C2ORF40 chromosome 2 open reading frame 40
CASKIN2 CASK interacting protein 2
CCDC129 coiled-coil domain containing 129
CCDC152 coiled-coil domain containing 152
CCL2 chemokine (C-C motif) ligand 2
CCL23 chemokine (C-C motif) ligand 23
CCL3 chemokine (C-C motif) ligand 3
CCL4 chemokine (C-C motif) ligand 4
CCL4L2 chemokine (C-C motif) ligand 4-like 2
CCL7 chemokine (C-C motif) ligand 7
CCR1 chemokine (C-C motif) receptor 1
CD300C CD300c molecule
CD300E CD300e molecule
CD4 CD4 molecule
CD83 CD83 molecule
CDC37L1 cell division cycle 37-like 1
CDY2B chromodomain protein, Y-linked, 2B
CEBPB CCAAT/enhancer binding protein (C/EBP), beta
CFP complement factor properdin
CHIC2 cysteine-rich hydrophobic domain 2
CIDEB cell death-inducing DFFA-like effector b
CISH cytokine inducible SH2-containing protein
CLCF1 cardiotrophin-like cytokine factor 1
CLEC1B C-type lectin domain family 1, member B
CLEC4G C-type lectin domain family 4, member G
CLEC4M C-type lectin domain family 4, member M
CLRN3 clarin 3
CLYBL citrate lyase beta like
CNDP1 carnosine dipeptidase 1 (metallopeptidase M20 family)
COL6A6 collagen, type VI, alpha 6
CPEB3 cytoplasmic polyadenylation element binding protein 3
CRHBP corticotropin releasing hormone binding protein
CSF3 colony stimulating factor 3 (granulocyte)
CXCL2 chemokine (C-X-C motif) ligand 2
CYP2A7 cytochrome P450, family 2, subfamily A, polypeptide 7
CYP2B6 cytochrome P450, family 2, subfamily B, polypeptide 6
CYP2B7P cytochrome P450, family 2, subfamily B, polypeptide 7, pseudogene
CYP39A1 cytochrome P450, family 39, subfamily A, polypeptide 1
CYP4A11 cytochrome P450, family 4, subfamily A, polypeptide 11
DBH dopamine beta-hydroxylase (dopamine beta-monooxygenase)
DCAF11 DDB1 and CUL4 associated factor 11
DEPDC7 DEP domain containing 7
DHODH dihydroorotate dehydrogenase (quinone)
DHRS12 dehydrogenase/reductase (SDR family) member 12
DIO3OS DIO3 opposite strand/antisense RNA (head to head)
DIRAS3 DIRAS family, GTP-binding RAS-like 3
DNAJC25 DnaJ (Hsp40) homolog, subfamily C , member 25
DNASE1L3 deoxyribonuclease I-like 3
DPF3 D4, zinc and double PHD fingers, family 3
ECHS1 enoyl CoA hydratase, short chain, 1, mitochondrial
ECM1 extracellular matrix protein 1
EHD3 EH-domain containing 3
EPHA2 EPH receptor A2
ETFDH electron-transferring-flavoprotein dehydrogenase
ETS2 v-ets avian erythroblastosis virus E26 oncogene homolog 2
EXOSC6 exosome component 6
FAM215A family with sequence similarity 215, member A (non-protein coding)
FAM83F family with sequence similarity 83, member F
FAM99A family with sequence similarity 99, member A (non-protein coding)
FARP2 FERM, RhoGEF and pleckstrin domain protein 2
FBP1 fructose-1,6-bisphosphatase 1
FCAR Fc fragment of IgA receptor
FCN1 ficolin (collagen/fibrinogen domain containing) 1
FCN2 ficolin (collagen/fibrinogen domain containing lectin) 2
FCN3 ficolin (collagen/fibrinogen domain containing) 3
FGR FGR proto-oncogene, Src family tyrosine kinase
FITM1 fat storage-inducing transmembrane protein 1
FOLH1B folate hydrolase 1B
FOSL1 FOS-like antigen 1
FOXO1 forkhead box O1
FRMD6 FERM domain containing 6
FXN frataxin
FYN FYN proto-oncogene, Src family tyrosine kinase
GADD45B growth arrest and DNA-damage-inducible, beta
GADD45G growth arrest and DNA-damage-inducible, gamma
GBA3 glucosidase, beta, acid 3 (gene/pseudogene)
GBP1 guanylate binding protein 1, interferon-inducible
GCHFR GTP cyclohydrolase I feedback regulator
GJC3 gap junction protein, gamma 3, 30.2kDa
GLS2 glutaminase 2 (liver, mitochondrial)
GLYAT glycine-N-acyltransferase
GLYATL1 glycine-N-acyltransferase-like 1
GLYCTK glycerate kinase
GNPNAT1 glucosamine-phosphate N-acetyltransferase 1
GPR182 G protein-coupled receptor 182
GPR89B G protein-coupled receptor 89B
GRAMD3 GRAM domain containing 3
GRIN2B glutamate receptor, ionotropic, N-methyl D-aspartate 2B
GSTM1 glutathione S-transferase mu 1
GSTM2 glutathione S-transferase mu 2 (muscle)
GSTZ1 glutathione S-transferase zeta 1
HAO2 hydroxyacid oxidase 2 (long chain)
HES1 hes family bHLH transcription factor 1
HGFAC HGF activator
HIST1H2BB histone cluster 1, H2bb
HLX H2.0-like homeobox
HMGCL 3-hydroxymethyl-3-methylglutaryl-CoA lyase
HOGA1 4-hydroxy-2-oxoglutarate aldolase 1
HRSP12 heat-responsive protein 12
ID2 inhibitor of DNA binding 2, dominant negative helix-loop-helix protein
IDNK idnK, gluconokinase homolog (E. coli)
IL17C interleukin 17C
IL4R interleukin 4 receptor
IRF1 interferon regulatory factor 1
IRF2BPL interferon regulatory factor 2 binding protein-like
ISOC1 isochorismatase domain containing 1
ISPD isoprenoid synthase domain containing
ITPKC inositol-trisphosphate 3-kinase C
IVD isovaleryl-CoA dehydrogenase
JUNB jun B proto-oncogene
KALRN kalirin, RhoGEF kinase
KBTBD13 kelch repeat and BTB (POZ) domain containing 13
KDM6B lysine (K)-specific demethylase 6B
KIAA0040 KIAA0040
KIAA1217 KIAA1217
KIF19 kinesin family member 19
KLF10 Kruppel-like factor 10
KRT40 keratin 40, type I
KRT71 keratin 71, type II
KRTAP4-12 keratin associated protein 4-12
LCAT lecithin-cholesterol acyltransferase
LILRA3 leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3
LILRA5 leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5
LILRB2 leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2
LINC00261 long intergenic non-protein coding RNA 261
LONRF1 LON peptidase N-terminal domain and ring finger 1
LYZL6 lysozyme-like 6
MAB21L3 mab-21-like 3 (C. elegans)
MAP2K1 mitogen-activated protein kinase kinase 1
MAP2K3 mitogen-activated protein kinase kinase 3
MARCO macrophage receptor with collagenous structure
MCC mutated in colorectal cancers
METTL7B methyltransferase like 7B
MIDN midnolin
MLF2 myeloid leukemia factor 2
MMP19 matrix metallopeptidase 19
MOB3C MOB kinase activator 3C
MPC1 mitochondrial pyruvate carrier 1
MRPL16 mitochondrial ribosomal protein L16
MRPL32 mitochondrial ribosomal protein L32
MRPL39 mitochondrial ribosomal protein L39
MSRA methionine sulfoxide reductase A
MT1E metallothionein 1E
MT1X metallothionein 1X
MT2A metallothionein 2A
NAB2 NGFI-A binding protein 2 (EGR1 binding protein 2)
NAT2 N-acetyltransferase 2 (arylamine N-acetyltransferase)
NBPF7 neuroblastoma breakpoint family, member 7
NCF1B neutrophil cytosolic factor 1B pseudogene
NDRG2 NDRG family member 2
NDUFV2 NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa
NFE2L2 nuclear factor, erythroid 2-like 2
NKX3-1 NK3 homeobox 1
NMRK1 nicotinamide riboside kinase 1
NOL4 nucleolar protein 4
NPHP3-AS1 NPHP3 antisense RNA 1
NRG1 neuregulin 1
NSUN6 NOP2/Sun domain family, member 6
NT5C1B 5'-nucleotidase, cytosolic IB
NXF3 nuclear RNA export factor 3
ODF3 outer dense fiber of sperm tails 3
OR1E2 olfactory receptor, family 1, subfamily E, member 2
OR2B11 olfactory receptor, family 2, subfamily B, member 11
OVCH1 ovochymase 1
OXER1 oxoeicosanoid (OXE) receptor 1
PCK2 phosphoenolpyruvate carboxykinase 2 (mitochondrial)
PDLIM5 PDZ and LIM domain 5
PECR peroxisomal trans-2-enoyl-CoA reductase
PIM1 Pim-1 proto-oncogene, serine/threonine kinase
PIM3 Pim-3 proto-oncogene, serine/threonine kinase
PLA2G16 phospholipase A2, group XVI
PLK3 polo-like kinase 3
PLSCR4 phospholipid scramblase 4
PNPLA1 patatin-like phospholipase domain containing 1
PNRC1 proline-rich nuclear receptor coactivator 1
POLR1E polymerase (RNA) I polypeptide E, 53kDa
PON3 paraoxonase 3
PPAP2B phosphatidic acid phosphatase type 2B
PPAPDC2 phosphatidic acid phosphatase type 2 domain containing 2
PPP1R17 protein phosphatase 1, regulatory subunit 17
PPP1R18 protein phosphatase 1, regulatory subunit 18
PPP2CB protein phosphatase 2, catalytic subunit, beta isozyme
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha
PRG3 proteoglycan 3
PRODH2 proline dehydrogenase (oxidase) 2
PTMS parathymosin
PXDC1 PX domain containing 1
PYROXD2 pyridine nucleotide-disulphide oxidoreductase domain 2
RAB20 RAB20, member RAS oncogene family
RALGDS ral guanine nucleotide dissociation stimulator
RDH5 retinol dehydrogenase 5 (11-cis/9-cis)
RFX2 regulatory factor X, 2 (influences HLA class II expression)
RGS3 regulator of G-protein signaling 3
RIC3 RIC3 acetylcholine receptor chaperone
RIPK4 receptor-interacting serine-threonine kinase 4
RMDN2 regulator of microtubule dynamics 2
RMRP RNA component of mitochondrial RNA processing endoribonuclease
RND1 Rho family GTPase 1
RPPH1 ribonuclease P RNA component H1
RTN4 reticulon 4
SCARNA10 small Cajal body-specific RNA 10
SCARNA18 small Cajal body-specific RNA 18
SCARNA2 small Cajal body-specific RNA 2
SCARNA5 small Cajal body-specific RNA 5
SCARNA6 small Cajal body-specific RNA 6
SCARNA7 small Cajal body-specific RNA 7
SCGB3A1 secretoglobin, family 3A, member 1
SDC4 syndecan 4
SELE selectin E
SEMG2 semenogelin II
SERPINB8 serpin peptidase inhibitor, clade B (ovalbumin), member 8
SERPINB9 serpin peptidase inhibitor, clade B (ovalbumin), member 9
SETD9 SET domain containing 9
SGK1 serum/glucocorticoid regulated kinase 1
SHB Src homology 2 domain containing adaptor protein B
SIGLEC14 sialic acid binding Ig-like lectin 14
SIGLEC16 sialic acid binding Ig-like lectin 16 (gene/pseudogene)
SLC10A1 solute carrier family 10 (sodium/bile acid cotransporter), member 1
SLC25A47 solute carrier family 25, member 47
SLC9A3R2 solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 2
SLITRK3 SLIT and NTRK-like family, member 3
SMIM24 small integral membrane protein 24
SNAI1 snail family zinc finger 1
SNORA14A small nucleolar RNA, H/ACA box 14A
SNORA14B small nucleolar RNA, H/ACA box 14B
SNORA20 small nucleolar RNA, H/ACA box 20
SNORA21 small nucleolar RNA, H/ACA box 21
SNORA23 small nucleolar RNA, H/ACA box 23
SNORA24 small nucleolar RNA, H/ACA box 24
SNORA2A small nucleolar RNA, H/ACA box 2A
SNORA45A small nucleolar RNA, H/ACA box 45A
SNORA48 small nucleolar RNA, H/ACA box 48
SNORA49 small nucleolar RNA, H/ACA box 49
SNORA52 small nucleolar RNA, H/ACA box 52
SNORA57 small nucleolar RNA, H/ACA box 57
SNORA6 small nucleolar RNA, H/ACA box 6
SNORA64 small nucleolar RNA, H/ACA box 64
SNORA71D small nucleolar RNA, H/ACA box 71D
SNORA76A small nucleolar RNA, H/ACA box 76A
SNORD10 small nucleolar RNA, C/D box 10
SNORD15A small nucleolar RNA, C/D box 15A
SNORD17 small nucleolar RNA, C/D box 17
SNORD97 small nucleolar RNA, C/D box 97
SOCS2 suppressor of cytokine signaling 2
SOCS3 suppressor of cytokine signaling 3
SOX6 SRY (sex determining region Y)-box 6
SPG20 spastic paraplegia 20 (Troyer syndrome)
SPIC Spi-C transcription factor (Spi-1/PU.1 related)
SPSB1 splA/ryanodine receptor domain and SOCS box containing 1
SRGN serglycin
SRSF5 serine/arginine-rich splicing factor 5
ST3GAL6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6
SUOX sulfite oxidase
SYS1-DBNDD2 SYS1-DBNDD2 readthrough (NMD candidate)
TANK TRAF family member-associated NFKB activator
TBC1D29 TBC1 domain family, member 29
TBXA2R thromboxane A2 receptor
TDO2 tryptophan 2,3-dioxygenase
TEX26 testis expressed 26
TFPI2 tissue factor pathway inhibitor 2
TJP2 tight junction protein 2
TMEM82 transmembrane protein 82
TMPRSS2 transmembrane protease, serine 2
TNFRSF1A tumor necrosis factor receptor superfamily, member 1A
TREH trehalase (brush-border membrane glycoprotein)
TRIM15 tripartite motif containing 15
TRMT11 tRNA methyltransferase 11 homolog (S. cerevisiae)
TSLP thymic stromal lymphopoietin
TTC36 tetratricopeptide repeat domain 36
TTR transthyretin
TTTY10 testis-specific transcript, Y-linked 10 (non-protein coding)
TUBB7P tubulin, beta 7, pseudogene
UGT2B7 UDP glucuronosyltransferase 2 family, polypeptide B7
UPK1B uroplakin 1B
UROC1 urocanate hydratase 1
VNN1 vanin 1
YPEL2 yippee-like 2 (Drosophila)
ZC2HC1C zinc finger, C2HC-type containing 1C
ZFP36 ZFP36 ring finger protein
ZG16 zymogen granule protein 16
ZNF367 zinc finger protein 367
ZNF878 zinc finger protein 878
ZSWIM6 zinc finger, SWIM-type containing 6