Liver hepatocellular carcinoma_LIHC_TCGA-DD-A118-11A-11R-A131-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Liver hepatocellular carcinoma_LIHC (The Cancer Genome Atlas)
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Genes

377 genes with high or low expression in Liver hepatocellular carcinoma_LIHC_TCGA-DD-A118-11A-11R-A131-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
AADAT aminoadipate aminotransferase
ABCD3 ATP-binding cassette, sub-family D (ALD), member 3
ABLIM3 actin binding LIM protein family, member 3
ACAA1 acetyl-CoA acyltransferase 1
ACAA2 acetyl-CoA acyltransferase 2
ACAD11 acyl-CoA dehydrogenase family, member 11
ACADL acyl-CoA dehydrogenase, long chain
ACADM acyl-CoA dehydrogenase, C-4 to C-12 straight chain
ACADS acyl-CoA dehydrogenase, C-2 to C-3 short chain
ACADSB acyl-CoA dehydrogenase, short/branched chain
ACMSD aminocarboxymuconate semialdehyde decarboxylase
ACSL1 acyl-CoA synthetase long-chain family member 1
ACSM5 acyl-CoA synthetase medium-chain family member 5
ACTR3C ARP3 actin-related protein 3 homolog C (yeast)
ACVR1C activin A receptor, type IC
ADGRG7 adhesion G protein-coupled receptor G7
ADI1 acireductone dioxygenase 1
ADK adenosine kinase
ADRA1A adrenoceptor alpha 1A
AGMAT agmatine ureohydrolase (agmatinase)
AGPAT9 1-acylglycerol-3-phosphate O-acyltransferase 9
AIG1 androgen-induced 1
AK3 adenylate kinase 3
AKIRIN1 akirin 1
AKR1D1 aldo-keto reductase family 1, member D1
ALDH6A1 aldehyde dehydrogenase 6 family, member A1
ANAPC16 anaphase promoting complex subunit 16
ANKUB1 ankyrin repeat and ubiquitin domain containing 1
AQP7 aquaporin 7
ARID3C AT rich interactive domain 3C (BRIGHT-like)
ARL5A ADP-ribosylation factor-like 5A
ARNTL aryl hydrocarbon receptor nuclear translocator-like
ASAH2B N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2B
ASPA aspartoacylase
ATF1 activating transcription factor 1
ATP13A3 ATPase type 13A3
AVPI1 arginine vasopressin-induced 1
BCAR4 breast cancer anti-estrogen resistance 4 (non-protein coding)
BCKDHB branched chain keto acid dehydrogenase E1, beta polypeptide
BCO2 beta-carotene oxygenase 2
BEND2 BEN domain containing 2
BHMT betaine--homocysteine S-methyltransferase
BMP15 bone morphogenetic protein 15
BMPER BMP binding endothelial regulator
BNIP2 BCL2/adenovirus E1B 19kDa interacting protein 2
BPHL biphenyl hydrolase-like (serine hydrolase)
BZW1 basic leucine zipper and W2 domains 1
C11ORF54 chromosome 11 open reading frame 54
C12ORF29 chromosome 12 open reading frame 29
C12ORF66 chromosome 12 open reading frame 66
C15ORF43 chromosome 15 open reading frame 43
C17ORF107 chromosome 17 open reading frame 107
C1D C1D nuclear receptor corepressor
C21ORF91 chromosome 21 open reading frame 91
C2ORF47 chromosome 2 open reading frame 47
C3ORF49 chromosome 3 open reading frame 49
C3P1 complement component 3 precursor pseudogene
C9ORF41 chromosome 9 open reading frame 41
C9ORF72 chromosome 9 open reading frame 72
CAT catalase
CBR4 carbonyl reductase 4
CCDC90B coiled-coil domain containing 90B
CCL23 chemokine (C-C motif) ligand 23
CD302 CD302 molecule
CDC37L1 cell division cycle 37-like 1
CDNF cerebral dopamine neurotrophic factor
CEACAM3 carcinoembryonic antigen-related cell adhesion molecule 3
CFAP52 cilia and flagella associated protein 52
CFP complement factor properdin
CHURC1 churchill domain containing 1
CLEC12A C-type lectin domain family 12, member A
CLEC1B C-type lectin domain family 1, member B
CLEC4D C-type lectin domain family 4, member D
CLEC4G C-type lectin domain family 4, member G
CLRN1-AS1 CLRN1 antisense RNA 1
CMBL carboxymethylenebutenolidase homolog (Pseudomonas)
CNBP CCHC-type zinc finger, nucleic acid binding protein
CNDP1 carnosine dipeptidase 1 (metallopeptidase M20 family)
CNEP1R1 CTD nuclear envelope phosphatase 1 regulatory subunit 1
CNIH1 cornichon family AMPA receptor auxiliary protein 1
CORO1C coronin, actin binding protein, 1C
COX18 COX18 cytochrome c oxidase assembly factor
CPEB3 cytoplasmic polyadenylation element binding protein 3
CPEB4 cytoplasmic polyadenylation element binding protein 4
CPED1 cadherin-like and PC-esterase domain containing 1
CRBN cereblon
CREM cAMP responsive element modulator
CRHBP corticotropin releasing hormone binding protein
CRY1 cryptochrome circadian clock 1
CTBS chitobiase, di-N-acetyl-
CTNNA3 catenin (cadherin-associated protein), alpha 3
CXCR1 chemokine (C-X-C motif) receptor 1
CXCR2 chemokine (C-X-C motif) receptor 2
CXXC5 CXXC finger protein 5
CYB5A cytochrome b5 type A (microsomal)
CYP2C19 cytochrome P450, family 2, subfamily C, polypeptide 19
CYP39A1 cytochrome P450, family 39, subfamily A, polypeptide 1
CYP4A22 cytochrome P450, family 4, subfamily A, polypeptide 22
CYP4V2 cytochrome P450, family 4, subfamily V, polypeptide 2
DBT dihydrolipoamide branched chain transacylase E2
DCUN1D3 DCN1, defective in cullin neddylation 1, domain containing 3
DCUN1D4 DCN1, defective in cullin neddylation 1, domain containing 4
DENND4A DENN/MADD domain containing 4A
DIXDC1 DIX domain containing 1
DLG2 discs, large homolog 2 (Drosophila)
DMGDH dimethylglycine dehydrogenase
DNAJB7 DnaJ (Hsp40) homolog, subfamily B, member 7
DNAJC25 DnaJ (Hsp40) homolog, subfamily C , member 25
DNASE1L3 deoxyribonuclease I-like 3
DUSP14 dual specificity phosphatase 14
EDEM1 ER degradation enhancer, mannosidase alpha-like 1
EHD3 EH-domain containing 3
EIF1AX eukaryotic translation initiation factor 1A, X-linked
EIF5 eukaryotic translation initiation factor 5
ELL2 elongation factor, RNA polymerase II, 2
EPB41L4B erythrocyte membrane protein band 4.1 like 4B
EPHB1 EPH receptor B1
EPHX2 epoxide hydrolase 2, cytoplasmic
ESR1 estrogen receptor 1
ETFDH electron-transferring-flavoprotein dehydrogenase
EVA1A eva-1 homolog A (C. elegans)
FAM134B family with sequence similarity 134, member B
FAM13A family with sequence similarity 13, member A
FAM149A family with sequence similarity 149, member A
FAM167A-AS1 FAM167A antisense RNA 1
FAM167B family with sequence similarity 167, member B
FAM210A family with sequence similarity 210, member A
FAM227B family with sequence similarity 227, member B
FAM46C family with sequence similarity 46, member C
FAM96A family with sequence similarity 96, member A
FBXL3 F-box and leucine-rich repeat protein 3
FBXO3 F-box protein 3
FBXO33 F-box protein 33
FCAR Fc fragment of IgA receptor
FCN2 ficolin (collagen/fibrinogen domain containing lectin) 2
FCN3 ficolin (collagen/fibrinogen domain containing) 3
FEZ1 fasciculation and elongation protein zeta 1 (zygin I)
FGFBP2 fibroblast growth factor binding protein 2
FGFR1OP2 FGFR1 oncogene partner 2
FGL2 fibrinogen-like 2
FHL2 four and a half LIM domains 2
FOLR3 folate receptor 3 (gamma)
FOXO1 forkhead box O1
FPR1 formyl peptide receptor 1
FPR2 formyl peptide receptor 2
FRMD4B FERM domain containing 4B
FYTTD1 forty-two-three domain containing 1
GAREM GRB2 associated, regulator of MAPK1
GATM glycine amidinotransferase (L-arginine:glycine amidinotransferase)
GBA3 glucosidase, beta, acid 3 (gene/pseudogene)
GCH1 GTP cyclohydrolase 1
GFOD1 glucose-fructose oxidoreductase domain containing 1
GFOD2 glucose-fructose oxidoreductase domain containing 2
GLYAT glycine-N-acyltransferase
GLYATL1 glycine-N-acyltransferase-like 1
GNPNAT1 glucosamine-phosphate N-acetyltransferase 1
GPR12 G protein-coupled receptor 12
GPR135 G protein-coupled receptor 135
GPR146 G protein-coupled receptor 146
GPR180 G protein-coupled receptor 180
GPR182 G protein-coupled receptor 182
GRAMD1C GRAM domain containing 1C
GSTZ1 glutathione S-transferase zeta 1
HIGD1A HIG1 hypoxia inducible domain family, member 1A
HOGA1 4-hydroxy-2-oxoglutarate aldolase 1
HOOK1 hook microtubule-tethering protein 1
HRSP12 heat-responsive protein 12
HS3ST3B1 heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1
IBTK inhibitor of Bruton agammaglobulinemia tyrosine kinase
ICAM3 intercellular adhesion molecule 3
IDNK idnK, gluconokinase homolog (E. coli)
IL1RAP interleukin 1 receptor accessory protein
IL1RAPL2 interleukin 1 receptor accessory protein-like 2
IL33 interleukin 33
INTS6 integrator complex subunit 6
KBTBD11 kelch repeat and BTB (POZ) domain containing 11
KCND3 potassium channel, voltage gated Shal related subfamily D, member 3
KIAA0825 KIAA0825
KIAA1217 KIAA1217
KIF19 kinesin family member 19
KL klotho
KLHL15 kelch-like family member 15
KLHL2 kelch-like family member 2
KMO kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)
L2HGDH L-2-hydroxyglutarate dehydrogenase
LGI1 leucine-rich, glioma inactivated 1
LIFR leukemia inhibitory factor receptor alpha
LILRA5 leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5
LIN7C lin-7 homolog C (C. elegans)
LINC00238 long intergenic non-protein coding RNA 238
LINC00261 long intergenic non-protein coding RNA 261
LINC00476 long intergenic non-protein coding RNA 476
LINC00597 long intergenic non-protein coding RNA 597
LOC645752 golgin A6 family, member A pseudogene
LONRF3 LON peptidase N-terminal domain and ring finger 3
LRAT lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase)
LRRC40 leucine rich repeat containing 40
LYRM1 LYR motif containing 1
LYRM5 LYR motif containing 5
LYSMD2 LysM, putative peptidoglycan-binding, domain containing 2
LYSMD3 LysM, putative peptidoglycan-binding, domain containing 3
LYVE1 lymphatic vessel endothelial hyaluronan receptor 1
MAN1C1 mannosidase, alpha, class 1C, member 1
MANEA mannosidase, endo-alpha
MAP2K1 mitogen-activated protein kinase kinase 1
MAP2K4 mitogen-activated protein kinase kinase 4
MBNL2 muscleblind-like splicing regulator 2
MCC mutated in colorectal cancers
MCEE methylmalonyl CoA epimerase
MEGF9 multiple EGF-like-domains 9
MESTIT1 MEST intronic transcript 1, antisense RNA
MFAP3L microfibrillar-associated protein 3-like
MIER1 mesoderm induction early response 1, transcriptional regulator
MOB3C MOB kinase activator 3C
MOGAT2 monoacylglycerol O-acyltransferase 2
MPC1 mitochondrial pyruvate carrier 1
MRO maestro
MRPL32 mitochondrial ribosomal protein L32
MS4A6A membrane-spanning 4-domains, subfamily A, member 6A
MS4A7 membrane-spanning 4-domains, subfamily A, member 7
MT1H metallothionein 1H
MTMR6 myotubularin related protein 6
N4BP2L1 NEDD4 binding protein 2-like 1
NAAA N-acylethanolamine acid amidase
NAB1 NGFI-A binding protein 1 (EGR1 binding protein 1)
NADK2 NAD kinase 2, mitochondrial
NAPEPLD N-acyl phosphatidylethanolamine phospholipase D
NAT2 N-acetyltransferase 2 (arylamine N-acetyltransferase)
NCF1B neutrophil cytosolic factor 1B pseudogene
NDEL1 nudE neurodevelopment protein 1-like 1
NDFIP2 Nedd4 family interacting protein 2
NDST3 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3
NHLRC2 NHL repeat containing 2
NIPAL1 NIPA-like domain containing 1
NIT2 nitrilase family, member 2
NKIRAS1 NFKB inhibitor interacting Ras-like 1
NKX3-1 NK3 homeobox 1
NMRK1 nicotinamide riboside kinase 1
NR1H4 nuclear receptor subfamily 1, group H, member 4
NR4A3 nuclear receptor subfamily 4, group A, member 3
NT5C1A 5'-nucleotidase, cytosolic IA
NTF3 neurotrophin 3
OIT3 oncoprotein induced transcript 3
OR2B11 olfactory receptor, family 2, subfamily B, member 11
OTOP2 otopetrin 2
OVCH1 ovochymase 1
OXSM 3-oxoacyl-ACP synthase, mitochondrial
P2RX3 purinergic receptor P2X, ligand gated ion channel, 3
P2RY12 purinergic receptor P2Y, G-protein coupled, 12
PANK1 pantothenate kinase 1
PBLD phenazine biosynthesis-like protein domain containing
PCDH11Y protocadherin 11 Y-linked
PCGF5 polycomb group ring finger 5
PCTP phosphatidylcholine transfer protein
PEX13 peroxisomal biogenesis factor 13
PEX3 peroxisomal biogenesis factor 3
PGM1 phosphoglucomutase 1
PHF13 PHD finger protein 13
PHLDA1 pleckstrin homology-like domain, family A, member 1
PHLDB2 pleckstrin homology-like domain, family B, member 2
PHYH phytanoyl-CoA 2-hydroxylase
PITPNM3 PITPNM family member 3
PLEK2 pleckstrin 2
PLGLA plasminogen-like A (pseudogene)
PLGLB2 plasminogen-like B2
PLIN1 perilipin 1
PLIN2 perilipin 2
PNPLA4 patatin-like phospholipase domain containing 4
PNPLA8 patatin-like phospholipase domain containing 8
PON3 paraoxonase 3
PPARGC1A peroxisome proliferator-activated receptor gamma, coactivator 1 alpha
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha
PRB4 proline-rich protein BstNI subfamily 4
PRDX3 peroxiredoxin 3
PSAT1 phosphoserine aminotransferase 1
PSKH2 protein serine kinase H2
PTS 6-pyruvoyltetrahydropterin synthase
PUS10 pseudouridylate synthase 10
PVALB parvalbumin
PXDC1 PX domain containing 1
PXMP2 peroxisomal membrane protein 2, 22kDa
PZP pregnancy-zone protein
RAB33B RAB33B, member RAS oncogene family
RANBP3L RAN binding protein 3-like
RAP1B RAP1B, member of RAS oncogene family
RASGEF1B RasGEF domain family, member 1B
RBM7 RNA binding motif protein 7
RCHY1 ring finger and CHY zinc finger domain containing 1, E3 ubiquitin protein ligase
RCL1 RNA terminal phosphate cyclase-like 1
RDH16 retinol dehydrogenase 16 (all-trans)
RFPL1 ret finger protein-like 1
RLN1 relaxin 1
RMDN2 regulator of microtubule dynamics 2
RNF11 ring finger protein 11
RNF125 ring finger protein 125, E3 ubiquitin protein ligase
RNF138 ring finger protein 138, E3 ubiquitin protein ligase
RNF152 ring finger protein 152
RORA RAR-related orphan receptor A
RP2 retinitis pigmentosa 2 (X-linked recessive)
RPP14 ribonuclease P/MRP 14kDa subunit
RYBP RING1 and YY1 binding protein
S100A12 S100 calcium binding protein A12
S1PR1 sphingosine-1-phosphate receptor 1
SAA4 serum amyloid A4, constitutive
SALL1 spalt-like transcription factor 1
SAR1B secretion associated, Ras related GTPase 1B
SCIMP SLP adaptor and CSK interacting membrane protein
SDC4P syndecan 4 pseudogene
SDHB succinate dehydrogenase complex, subunit B, iron sulfur (Ip)
SDHD succinate dehydrogenase complex, subunit D, integral membrane protein
SEC24A SEC24 family member A
SELK selenoprotein K
SELT selenoprotein T
SENP8 SUMO/sentrin specific peptidase family member 8
SERPINB8 serpin peptidase inhibitor, clade B (ovalbumin), member 8
SERPINE3 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3
SERTAD1 SERTA domain containing 1
SETD9 SET domain containing 9
SFXN1 sideroflexin 1
SH2D1B SH2 domain containing 1B
SH3BGRL2 SH3 domain binding glutamate-rich protein like 2
SIGLEC14 sialic acid binding Ig-like lectin 14
SLC16A12 solute carrier family 16, member 12
SLC22A10 solute carrier family 22, member 10
SLC25A46 solute carrier family 25, member 46
SLC38A2 solute carrier family 38, member 2
SLITRK3 SLIT and NTRK-like family, member 3
SMIM14 small integral membrane protein 14
SNAPC5 small nuclear RNA activating complex, polypeptide 5, 19kDa
SNX18 sorting nexin 18
SNX33 sorting nexin 33
SOCS2 suppressor of cytokine signaling 2
SOCS6 suppressor of cytokine signaling 6
SORD sorbitol dehydrogenase
SPRYD4 SPRY domain containing 4
SRGN serglycin
ST3GAL6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6
STARD5 StAR-related lipid transfer (START) domain containing 5
SUCLG2 succinate-CoA ligase, GDP-forming, beta subunit
TAB2 TGF-beta activated kinase 1/MAP3K7 binding protein 2
TAF13 TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 18kDa
TANK TRAF family member-associated NFKB activator
TBC1D15 TBC1 domain family, member 15
TBC1D23 TBC1 domain family, member 23
TDO2 tryptophan 2,3-dioxygenase
TECTB tectorin beta
TEX12 testis expressed 12
THNSL1 threonine synthase-like 1 (S. cerevisiae)
TLN2 talin 2
TLR4 toll-like receptor 4
TMEM263 transmembrane protein 263
TMEM56 transmembrane protein 56
TPT1 tumor protein, translationally-controlled 1
TRAPPC3L trafficking protein particle complex 3-like
TRAPPC6B trafficking protein particle complex 6B
TRAPPC8 trafficking protein particle complex 8
TRPM8 transient receptor potential cation channel, subfamily M, member 8
TRPV3 transient receptor potential cation channel, subfamily V, member 3
TTPA tocopherol (alpha) transfer protein
TUBB1 tubulin, beta 1 class VI
TUBE1 tubulin, epsilon 1
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1
UBAP1 ubiquitin associated protein 1
UBE2D3 ubiquitin-conjugating enzyme E2D 3
UBL3 ubiquitin-like 3
USP12 ubiquitin specific peptidase 12
USP15 ubiquitin specific peptidase 15
USP38 ubiquitin specific peptidase 38
VKORC1L1 vitamin K epoxide reductase complex, subunit 1-like 1
VMO1 vitelline membrane outer layer 1 homolog (chicken)
YAF2 YY1 associated factor 2
ZFAND6 zinc finger, AN1-type domain 6
ZNF268 zinc finger protein 268
ZNF410 zinc finger protein 410
ZNF800 zinc finger protein 800
ZSWIM6 zinc finger, SWIM-type containing 6

low expression

Symbol Name
SF3B2 splicing factor 3b, subunit 2, 145kDa