Liver hepatocellular carcinoma_LIHC_TCGA-BC-A216-11A-11R-A155-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Liver hepatocellular carcinoma_LIHC (The Cancer Genome Atlas)
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Genes

430 genes with high or low expression in Liver hepatocellular carcinoma_LIHC_TCGA-BC-A216-11A-11R-A155-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
AADAT aminoadipate aminotransferase
ABCC9 ATP-binding cassette, sub-family C (CFTR/MRP), member 9
ABRACL ABRA C-terminal like
ACAD11 acyl-CoA dehydrogenase family, member 11
ACADL acyl-CoA dehydrogenase, long chain
ACADM acyl-CoA dehydrogenase, C-4 to C-12 straight chain
ACAT1 acetyl-CoA acetyltransferase 1
ACOT1 acyl-CoA thioesterase 1
ACOT12 acyl-CoA thioesterase 12
ACSL1 acyl-CoA synthetase long-chain family member 1
ACVR1C activin A receptor, type IC
ADGRA3 adhesion G protein-coupled receptor A3
ADGRG7 adhesion G protein-coupled receptor G7
ADK adenosine kinase
ADM adrenomedullin
AGBL4 ATP/GTP binding protein-like 4
AGL amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase
AGTR1 angiotensin II receptor, type 1
AGXT2 alanine--glyoxylate aminotransferase 2
ALAS2 5'-aminolevulinate synthase 2
ALDH8A1 aldehyde dehydrogenase 8 family, member A1
AMDHD1 amidohydrolase domain containing 1
AMELX amelogenin, X-linked
ANAPC10 anaphase promoting complex subunit 10
ANGPTL3 angiopoietin-like 3
ANKRD37 ankyrin repeat domain 37
ANP32D acidic (leucine-rich) nuclear phosphoprotein 32 family, member D
ANXA10 annexin A10
APOA5 apolipoprotein A-V
APOF apolipoprotein F
AQP3 aquaporin 3 (Gill blood group)
ARG1 arginase 1
ARL5A ADP-ribosylation factor-like 5A
ASIC2 acid sensing (proton gated) ion channel 2
ASPG asparaginase
ASS1 argininosuccinate synthase 1
ASXL3 additional sex combs like transcriptional regulator 3
ATP13A5 ATPase type 13A5
ATP5L2 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit G2
BCKDHB branched chain keto acid dehydrogenase E1, beta polypeptide
BCO2 beta-carotene oxygenase 2
BEND2 BEN domain containing 2
BMPER BMP binding endothelial regulator
BNIP2 BCL2/adenovirus E1B 19kDa interacting protein 2
BZW1 basic leucine zipper and W2 domains 1
C11ORF54 chromosome 11 open reading frame 54
C12ORF54 chromosome 12 open reading frame 54
C16ORF87 chromosome 16 open reading frame 87
C1QTNF9 C1q and tumor necrosis factor related protein 9
C1R complement component 1, r subcomponent
C1S complement component 1, s subcomponent
C21ORF91 chromosome 21 open reading frame 91
C3ORF58 chromosome 3 open reading frame 58
C5ORF52 chromosome 5 open reading frame 52
C6 complement component 6
C6ORF25 chromosome 6 open reading frame 25
C8A complement component 8, alpha polypeptide
C8B complement component 8, beta polypeptide
C8ORF4 chromosome 8 open reading frame 4
C9 complement component 9
CA6 carbonic anhydrase VI
CAPN3 calpain 3, (p94)
CASC4 cancer susceptibility candidate 4
CCDC129 coiled-coil domain containing 129
CCDC184 coiled-coil domain containing 184
CCDC25 coiled-coil domain containing 25
CCDC28A coiled-coil domain containing 28A
CCDC79 coiled-coil domain containing 79
CCL14 chemokine (C-C motif) ligand 14
CCL23 chemokine (C-C motif) ligand 23
CCL3 chemokine (C-C motif) ligand 3
CCNH cyclin H
CD163 CD163 molecule
CD164 CD164 molecule, sialomucin
CD302 CD302 molecule
CD5L CD5 molecule-like
CDC37L1 cell division cycle 37-like 1
CDO1 cysteine dioxygenase type 1
CDX1 caudal type homeobox 1
CDX2 caudal type homeobox 2
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)
CEACAM8 carcinoembryonic antigen-related cell adhesion molecule 8
CELA1 chymotrypsin-like elastase family, member 1
CEPT1 choline/ethanolamine phosphotransferase 1
CES5A carboxylesterase 5A
CFAP20 cilia and flagella associated protein 20
CFI complement factor I
CHIC2 cysteine-rich hydrophobic domain 2
CIDEA cell death-inducing DFFA-like effector a
CIDEB cell death-inducing DFFA-like effector b
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
CLEC4M C-type lectin domain family 4, member M
CLEC9A C-type lectin domain family 9, member A
CMPK1 cytidine monophosphate (UMP-CMP) kinase 1, cytosolic
CNBP CCHC-type zinc finger, nucleic acid binding protein
CNDP1 carnosine dipeptidase 1 (metallopeptidase M20 family)
CNGA2 cyclic nucleotide gated channel alpha 2
CNKSR3 CNKSR family member 3
COL6A6 collagen, type VI, alpha 6
COLEC10 collectin sub-family member 10 (C-type lectin)
COQ10B coenzyme Q10 homolog B (S. cerevisiae)
COQ2 coenzyme Q2 4-hydroxybenzoate polyprenyltransferase
CP ceruloplasmin (ferroxidase)
CPB2 carboxypeptidase B2 (plasma)
CPEB3 cytoplasmic polyadenylation element binding protein 3
CPN1 carboxypeptidase N, polypeptide 1
CRCP CGRP receptor component
CREB3L3 cAMP responsive element binding protein 3-like 3
CRHBP corticotropin releasing hormone binding protein
CRP C-reactive protein, pentraxin-related
CTBS chitobiase, di-N-acetyl-
CXCL12 chemokine (C-X-C motif) ligand 12
CXCL2 chemokine (C-X-C motif) ligand 2
CYP2B6 cytochrome P450, family 2, subfamily B, polypeptide 6
CYP8B1 cytochrome P450, family 8, subfamily B, polypeptide 1
DACH1 dachshund family transcription factor 1
DBT dihydrolipoamide branched chain transacylase E2
DCN decorin
DDX3X DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked
DEFA1B defensin, alpha 1B
DEFA4 defensin, alpha 4, corticostatin
DKFZP434H168 uncharacterized LOC26077
DLC1 DLC1 Rho GTPase activating protein
DNAH6 dynein, axonemal, heavy chain 6
DNAJB8 DnaJ (Hsp40) homolog, subfamily B, member 8
DNASE1L3 deoxyribonuclease I-like 3
DSG3 desmoglein 3
DUSP10 dual specificity phosphatase 10
DUSP16 dual specificity phosphatase 16
DYTN dystrotelin
ECM1 extracellular matrix protein 1
EDNRB endothelin receptor type B
EGR1 early growth response 1
EIF1AX eukaryotic translation initiation factor 1A, X-linked
EPB41L4B erythrocyte membrane protein band 4.1 like 4B
EPHB1 EPH receptor B1
EPHX2 epoxide hydrolase 2, cytoplasmic
ERLIN1 ER lipid raft associated 1
ESRG embryonic stem cell related (non-protein coding)
ETFDH electron-transferring-flavoprotein dehydrogenase
ETS2 v-ets avian erythroblastosis virus E26 oncogene homolog 2
EVA1A eva-1 homolog A (C. elegans)
F9 coagulation factor IX
FAAH2 fatty acid amide hydrolase 2
FAM134B family with sequence similarity 134, member B
FAM180A family with sequence similarity 180, member A
FAM96A family with sequence similarity 96, member A
FBP1 fructose-1,6-bisphosphatase 1
FBXO15 F-box protein 15
FCGR3A Fc fragment of IgG, low affinity IIIa, receptor (CD16a)
FCN2 ficolin (collagen/fibrinogen domain containing lectin) 2
FCN3 ficolin (collagen/fibrinogen domain containing) 3
FGA fibrinogen alpha chain
FGB fibrinogen beta chain
FGF23 fibroblast growth factor 23
FGG fibrinogen gamma chain
FGL1 fibrinogen-like 1
FHL2 four and a half LIM domains 2
FITM1 fat storage-inducing transmembrane protein 1
FMO2 flavin containing monooxygenase 2 (non-functional)
FOS FBJ murine osteosarcoma viral oncogene homolog
FOXF1 forkhead box F1
FOXO1 forkhead box O1
FXN frataxin
FYN FYN proto-oncogene, Src family tyrosine kinase
GABARAPL1 GABA(A) receptor-associated protein like 1
GADD45B growth arrest and DNA-damage-inducible, beta
GADD45G growth arrest and DNA-damage-inducible, gamma
GALC galactosylceramidase
GAREM GRB2 associated, regulator of MAPK1
GATA6 GATA binding protein 6
GCH1 GTP cyclohydrolase 1
GFOD1 glucose-fructose oxidoreductase domain containing 1
GIPC2 GIPC PDZ domain containing family, member 2
GLS2 glutaminase 2 (liver, mitochondrial)
GLYATL1 glycine-N-acyltransferase-like 1
GNAO1 guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O
GOT1 glutamic-oxaloacetic transaminase 1, soluble
GP9 glycoprotein IX (platelet)
GPA33 glycoprotein A33 (transmembrane)
GPM6A glycoprotein M6A
GPR142 G protein-coupled receptor 142
GPR149 G protein-coupled receptor 149
GRAMD3 GRAM domain containing 3
GREM2 gremlin 2, DAN family BMP antagonist
GRHL3 grainyhead-like 3 (Drosophila)
HBA2 hemoglobin, alpha 2
HBB hemoglobin, beta
HBG1 hemoglobin, gamma A
HBG2 hemoglobin, gamma G
HES1 hes family bHLH transcription factor 1
HHLA1 HERV-H LTR-associating 1
HP haptoglobin
HPS5 Hermansky-Pudlak syndrome 5
HPX hemopexin
HRSP12 heat-responsive protein 12
HYPM huntingtin interacting protein M
ID2 inhibitor of DNA binding 2, dominant negative helix-loop-helix protein
ID2B inhibitor of DNA binding 2B, dominant negative helix-loop-helix protein (pseudogene)
IDNK idnK, gluconokinase homolog (E. coli)
IER2 immediate early response 2
IGF1 insulin-like growth factor 1 (somatomedin C)
IGFBP1 insulin-like growth factor binding protein 1
IGFBP3 insulin-like growth factor binding protein 3
IL1RAP interleukin 1 receptor accessory protein
IL1RN interleukin 1 receptor antagonist
IL5 interleukin 5
INMT indolethylamine N-methyltransferase
JCHAIN joining chain of multimeric IgA and IgM
JUN jun proto-oncogene
JUNB jun B proto-oncogene
JUND jun D proto-oncogene
KCNIP4-IT1 KCNIP4 intronic transcript 1
KCNN2 potassium channel, calcium activated intermediate/small conductance subfamily N alpha, member 2
KDSR 3-ketodihydrosphingosine reductase
KLF9 Kruppel-like factor 9
KLK12 kallikrein-related peptidase 12
KLRF1 killer cell lectin-like receptor subfamily F, member 1
KLRG2 killer cell lectin-like receptor subfamily G, member 2
KMO kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)
L1TD1 LINE-1 type transposase domain containing 1
LCAT lecithin-cholesterol acyltransferase
LCE3A late cornified envelope 3A
LDHA lactate dehydrogenase A
LIFR leukemia inhibitory factor receptor alpha
LINC00261 long intergenic non-protein coding RNA 261
LINC00303 long intergenic non-protein coding RNA 303
LINC00305 long intergenic non-protein coding RNA 305
LOC152225 uncharacterized LOC152225
LOC284632 uncharacterized LOC284632
LOC284788 uncharacterized LOC284788
LPA lipoprotein, Lp(a)
LRAT lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase)
LRG1 leucine-rich alpha-2-glycoprotein 1
LURAP1L leucine rich adaptor protein 1-like
LY6G6C lymphocyte antigen 6 complex, locus G6C
LY6G6F lymphocyte antigen 6 complex, locus G6F
LYRM1 LYR motif containing 1
LYVE1 lymphatic vessel endothelial hyaluronan receptor 1
MANEA mannosidase, endo-alpha
MAP2K1 mitogen-activated protein kinase kinase 1
MARC2 mitochondrial amidoxime reducing component 2
MBIP MAP3K12 binding inhibitory protein 1
MBL2 mannose-binding lectin (protein C) 2, soluble
MCEE methylmalonyl CoA epimerase
METTL20 methyltransferase like 20
MFAP3L microfibrillar-associated protein 3-like
MFSD2A major facilitator superfamily domain containing 2A
MIP major intrinsic protein of lens fiber
MLIP muscular LMNA-interacting protein
MMAA methylmalonic aciduria (cobalamin deficiency) cblA type
MMADHC methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria
MMP3 matrix metallopeptidase 3
MMRN1 multimerin 1
MPC1 mitochondrial pyruvate carrier 1
MRO maestro
MRPL19 mitochondrial ribosomal protein L19
MRPL39 mitochondrial ribosomal protein L39
MS4A3 membrane-spanning 4-domains, subfamily A, member 3 (hematopoietic cell-specific)
MS4A6A membrane-spanning 4-domains, subfamily A, member 6A
MS4A7 membrane-spanning 4-domains, subfamily A, member 7
MT1DP metallothionein 1D, pseudogene (functional)
MT1E metallothionein 1E
MT1F metallothionein 1F
MT1G metallothionein 1G
MT1H metallothionein 1H
MT1M metallothionein 1M
MT1X metallothionein 1X
MT2A metallothionein 2A
MTHFD2L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like
MTHFS 5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)
MUC2 mucin 2, oligomeric mucus/gel-forming
MYB v-myb avian myeloblastosis viral oncogene homolog
N4BP2L1 NEDD4 binding protein 2-like 1
NAAA N-acylethanolamine acid amidase
NAMPT nicotinamide phosphoribosyltransferase
NAP1L5 nucleosome assembly protein 1-like 5
NAT1 N-acetyltransferase 1 (arylamine N-acetyltransferase)
NAT2 N-acetyltransferase 2 (arylamine N-acetyltransferase)
NDUFA5 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5
NDUFAF1 NADH dehydrogenase (ubiquinone) complex I, assembly factor 1
NFIL3 nuclear factor, interleukin 3 regulated
NNMT nicotinamide N-methyltransferase
NOL4 nucleolar protein 4
NOX1 NADPH oxidase 1
NPSR1 neuropeptide S receptor 1
NRBF2 nuclear receptor binding factor 2
NTF3 neurotrophin 3
NUDT7 nudix (nucleoside diphosphate linked moiety X)-type motif 7
NUS1 nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)
OIT3 oncoprotein induced transcript 3
OR13C4 olfactory receptor, family 13, subfamily C, member 4
OR1D2 olfactory receptor, family 1, subfamily D, member 2
OR1E1 olfactory receptor, family 1, subfamily E, member 1
OR2W3 olfactory receptor, family 2, subfamily W, member 3
OR3A1 olfactory receptor, family 3, subfamily A, member 1
OR4F4 olfactory receptor, family 4, subfamily F, member 4
OR52B2 olfactory receptor, family 52, subfamily B, member 2
ORM1 orosomucoid 1
ORM2 orosomucoid 2
OTUD1 OTU deubiquitinase 1
P2RY12 purinergic receptor P2Y, G-protein coupled, 12
PBLD phenazine biosynthesis-like protein domain containing
PCBD1 pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha
PCCA propionyl CoA carboxylase, alpha polypeptide
PCK1 phosphoenolpyruvate carboxykinase 1 (soluble)
PDE6H phosphodiesterase 6H, cGMP-specific, cone, gamma
PEX13 peroxisomal biogenesis factor 13
PF4 platelet factor 4
PFN1P2 profilin 1 pseudogene 2
PGGT1B protein geranylgeranyltransferase type I, beta subunit
PHGR1 proline/histidine/glycine-rich 1
PLA2G12A phospholipase A2, group XIIA
PLA2G2A phospholipase A2, group IIA (platelets, synovial fluid)
PLA2G5 phospholipase A2, group V
PLGLB2 plasminogen-like B2
PLSCR4 phospholipid scramblase 4
PNPLA4 patatin-like phospholipase domain containing 4
PNRC1 proline-rich nuclear receptor coactivator 1
PPARGC1A peroxisome proliferator-activated receptor gamma, coactivator 1 alpha
PPBP pro-platelet basic protein (chemokine (C-X-C motif) ligand 7)
PPCS phosphopantothenoylcysteine synthetase
PPIL4 peptidylprolyl isomerase (cyclophilin)-like 4
PRDX3 peroxiredoxin 3
PROS1 protein S (alpha)
PROSC proline synthetase co-transcribed homolog (bacterial)
PTP4A1 protein tyrosine phosphatase type IVA, member 1
PTS 6-pyruvoyltetrahydropterin synthase
PUS3 pseudouridylate synthase 3
PVALB parvalbumin
QDPR quinoid dihydropteridine reductase
R3HDM2 R3H domain containing 2
RAB12 RAB12, member RAS oncogene family
RAB18 RAB18, member RAS oncogene family
RASD1 RAS, dexamethasone-induced 1
RCL1 RNA terminal phosphate cyclase-like 1
RDH16 retinol dehydrogenase 16 (all-trans)
REPS1 RALBP1 associated Eps domain containing 1
RFPL1 ret finger protein-like 1
RGS18 regulator of G-protein signaling 18
RHOB ras homolog family member B
RNASE4 ribonuclease, RNase A family, 4
RND3 Rho family GTPase 3
RNF11 ring finger protein 11
RNF152 ring finger protein 152
RRN3 RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)
S100A12 S100 calcium binding protein A12
SAA1 serum amyloid A1
SAA2 serum amyloid A2
SAMD12 sterile alpha motif domain containing 12
SAR1B secretion associated, Ras related GTPase 1B
SCOC short coiled-coil protein
SCP2 sterol carrier protein 2
SDHB succinate dehydrogenase complex, subunit B, iron sulfur (Ip)
SDHD succinate dehydrogenase complex, subunit D, integral membrane protein
SEC23A Sec23 homolog A (S. cerevisiae)
SEC61A2 Sec61 alpha 2 subunit (S. cerevisiae)
SEC62 SEC62 homolog (S. cerevisiae)
SERINC1 serine incorporator 1
SERPINA10 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3
SERPING1 serpin peptidase inhibitor, clade G (C1 inhibitor), member 1
SGPP1 sphingosine-1-phosphate phosphatase 1
SH2D1B SH2 domain containing 1B
SIGLEC7 sialic acid binding Ig-like lectin 7
SIRPA signal-regulatory protein alpha
SLC1A1 solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1
SLC22A3 solute carrier family 22 (organic cation transporter), member 3
SLC27A2 solute carrier family 27 (fatty acid transporter), member 2
SLC27A6 solute carrier family 27 (fatty acid transporter), member 6
SLC31A2 solute carrier family 31 (copper transporter), member 2
SLC35D3 solute carrier family 35, member D3
SLC38A2 solute carrier family 38, member 2
SLC38A4 solute carrier family 38, member 4
SLC39A14 solute carrier family 39 (zinc transporter), member 14
SLC41A2 solute carrier family 41 (magnesium transporter), member 2
SMIM14 small integral membrane protein 14
SMIM19 small integral membrane protein 19
SMPD3 sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)
SNRK SNF related kinase
SOCS2 suppressor of cytokine signaling 2
SPACA5 sperm acrosome associated 5
SPIC Spi-C transcription factor (Spi-1/PU.1 related)
SPRN shadow of prion protein homolog (zebrafish)
SPRYD4 SPRY domain containing 4
SSBP3 single stranded DNA binding protein 3
ST8SIA6 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6
STAB1 stabilin 1
STAB2 stabilin 2
STARD5 StAR-related lipid transfer (START) domain containing 5
STOM stomatin
SUCLG2 succinate-CoA ligase, GDP-forming, beta subunit
SUMO1P3 SUMO1 pseudogene 3 (functional)
SYBU syntabulin (syntaxin-interacting)
SYT9 synaptotagmin IX
SYTL5 synaptotagmin-like 5
TAL1 T-cell acute lymphocytic leukemia 1
TAS2R42 taste receptor, type 2, member 42
TAS2R50 taste receptor, type 2, member 50
TAT tyrosine aminotransferase
TDO2 tryptophan 2,3-dioxygenase
TERF2IP telomeric repeat binding factor 2, interacting protein
TEX26 testis expressed 26
TFR2 transferrin receptor 2
TIMD4 T-cell immunoglobulin and mucin domain containing 4
TMEM211 transmembrane protein 211
TMEM220 transmembrane protein 220
TMEM26 transmembrane protein 26
TMEM30A transmembrane protein 30A
TMEM56 transmembrane protein 56
TMTC3 transmembrane and tetratricopeptide repeat containing 3
TOB1 transducer of ERBB2, 1
TPK1 thiamin pyrophosphokinase 1
TREML1 triggering receptor expressed on myeloid cells-like 1
TRIM58 tripartite motif containing 58
TVP23C trans-golgi network vesicle protein 23 homolog C (S. cerevisiae)
UBE2DNL ubiquitin-conjugating enzyme E2D N-terminal like (pseudogene)
UOX urate oxidase, pseudogene
VIPR1 vasoactive intestinal peptide receptor 1
VPREB1 pre-B lymphocyte 1
WDR66 WD repeat domain 66
YAF2 YY1 associated factor 2
YIPF4 Yip1 domain family, member 4
ZAN zonadhesin (gene/pseudogene)
ZBTB21 zinc finger and BTB domain containing 21
ZFAND5 zinc finger, AN1-type domain 5
ZFP36 ZFP36 ring finger protein
ZFP36L1 ZFP36 ring finger protein-like 1
ZNF330 zinc finger protein 330