Liver hepatocellular carcinoma_LIHC_TCGA-BC-A10T-11A-11R-A131-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Liver hepatocellular carcinoma_LIHC (The Cancer Genome Atlas)
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Genes

354 genes with high or low expression in Liver hepatocellular carcinoma_LIHC_TCGA-BC-A10T-11A-11R-A131-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABCC9 ATP-binding cassette, sub-family C (CFTR/MRP), member 9
ABCD3 ATP-binding cassette, sub-family D (ALD), member 3
ACADM acyl-CoA dehydrogenase, C-4 to C-12 straight chain
ACADSB acyl-CoA dehydrogenase, short/branched chain
ACTRT3 actin-related protein T3
ACVR2B activin A receptor, type IIB
ADAMTS1 ADAM metallopeptidase with thrombospondin type 1 motif, 1
ADAMTS13 ADAM metallopeptidase with thrombospondin type 1 motif, 13
AGTR1 angiotensin II receptor, type 1
AHR aryl hydrocarbon receptor
AKAP2 A kinase (PRKA) anchor protein 2
AKIRIN1 akirin 1
ALB albumin
ALKBH8 alkB, alkylation repair homolog 8 (E. coli)
AMD1 adenosylmethionine decarboxylase 1
AMER2 APC membrane recruitment protein 2
AMN amnion associated transmembrane protein
ANGPTL6 angiopoietin-like 6
ANTXR2 anthrax toxin receptor 2
APOF apolipoprotein F
AQP3 aquaporin 3 (Gill blood group)
ARL4D ADP-ribosylation factor-like 4D
ARRDC3 arrestin domain containing 3
ASPA aspartoacylase
AVPR1A arginine vasopressin receptor 1A
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5
BCL3 B-cell CLL/lymphoma 3
BCL6 B-cell CLL/lymphoma 6
BHLHE40 basic helix-loop-helix family, member e40
BLNK B-cell linker
BMP10 bone morphogenetic protein 10
BMPER BMP binding endothelial regulator
C10ORF131 chromosome 10 open reading frame 131
C15ORF57 chromosome 15 open reading frame 57
C16ORF72 chromosome 16 open reading frame 72
C3ORF49 chromosome 3 open reading frame 49
C4ORF19 chromosome 4 open reading frame 19
CALM1 calmodulin 1 (phosphorylase kinase, delta)
CAND2 cullin-associated and neddylation-dissociated 2 (putative)
CASP7 caspase 7, apoptosis-related cysteine peptidase
CBWD5 COBW domain containing 5
CCBE1 collagen and calcium binding EGF domains 1
CCDC117 coiled-coil domain containing 117
CCDC141 coiled-coil domain containing 141
CCL14 chemokine (C-C motif) ligand 14
CCL23 chemokine (C-C motif) ligand 23
CD164L2 CD164 sialomucin-like 2
CDC37L1 cell division cycle 37-like 1
CDK17 cyclin-dependent kinase 17
CEBPD CCAAT/enhancer binding protein (C/EBP), delta
CFL2 cofilin 2 (muscle)
CHAMP1 chromosome alignment maintaining phosphoprotein 1
CHRM2 cholinergic receptor, muscarinic 2
CIRBP-AS1 CIRBP antisense RNA 1
CLDN1 claudin 1
CLEC1B C-type lectin domain family 1, member B
CLEC4G C-type lectin domain family 4, member G
CLEC4M C-type lectin domain family 4, member M
CMTM6 CKLF-like MARVEL transmembrane domain containing 6
CNBP CCHC-type zinc finger, nucleic acid binding protein
CNEP1R1 CTD nuclear envelope phosphatase 1 regulatory subunit 1
CNGA1 cyclic nucleotide gated channel alpha 1
COL6A6 collagen, type VI, alpha 6
COLEC10 collectin sub-family member 10 (C-type lectin)
CORO1C coronin, actin binding protein, 1C
CPEB3 cytoplasmic polyadenylation element binding protein 3
CPED1 cadherin-like and PC-esterase domain containing 1
CRABP2 cellular retinoic acid binding protein 2
CREB3L3 cAMP responsive element binding protein 3-like 3
CRHBP corticotropin releasing hormone binding protein
CRY1 cryptochrome circadian clock 1
CSNK1A1 casein kinase 1, alpha 1
CSRNP1 cysteine-serine-rich nuclear protein 1
CST9 cystatin 9 (testatin)
CXCL14 chemokine (C-X-C motif) ligand 14
CYP26A1 cytochrome P450, family 26, subfamily A, polypeptide 1
CYP2B6 cytochrome P450, family 2, subfamily B, polypeptide 6
CYP2C8 cytochrome P450, family 2, subfamily C, polypeptide 8
CYP4A11 cytochrome P450, family 4, subfamily A, polypeptide 11
DBH dopamine beta-hydroxylase (dopamine beta-monooxygenase)
DDX24 DEAD (Asp-Glu-Ala-Asp) box helicase 24
DDX3X DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked
DENND4A DENN/MADD domain containing 4A
DHODH dihydroorotate dehydrogenase (quinone)
DIRAS3 DIRAS family, GTP-binding RAS-like 3
DLC1 DLC1 Rho GTPase activating protein
DNAJC12 DnaJ (Hsp40) homolog, subfamily C, member 12
DNAJC25 DnaJ (Hsp40) homolog, subfamily C , member 25
DNALI1 dynein, axonemal, light intermediate chain 1
DNASE1L3 deoxyribonuclease I-like 3
DPF3 D4, zinc and double PHD fingers, family 3
DTX1 deltex 1, E3 ubiquitin ligase
DUSP6 dual specificity phosphatase 6
ECM1 extracellular matrix protein 1
EDEM1 ER degradation enhancer, mannosidase alpha-like 1
EIF1B eukaryotic translation initiation factor 1B
ELF2 E74-like factor 2 (ets domain transcription factor)
ENC1 ectodermal-neural cortex 1 (with BTB domain)
EPAS1 endothelial PAS domain protein 1
EPGN epithelial mitogen
EPO erythropoietin
ESR1 estrogen receptor 1
ETS2 v-ets avian erythroblastosis virus E26 oncogene homolog 2
EYA2 EYA transcriptional coactivator and phosphatase 2
FAM122A family with sequence similarity 122A
FAM25A family with sequence similarity 25, member A
FAM69A family with sequence similarity 69, member A
FBXL3 F-box and leucine-rich repeat protein 3
FBXO28 F-box protein 28
FCN2 ficolin (collagen/fibrinogen domain containing lectin) 2
FHL1 four and a half LIM domains 1
FOXA1 forkhead box A1
FOXF1 forkhead box F1
FRMD6 FERM domain containing 6
G3BP1 GTPase activating protein (SH3 domain) binding protein 1
GATA3 GATA binding protein 3
GATA4 GATA binding protein 4
GATM glycine amidinotransferase (L-arginine:glycine amidinotransferase)
GLRX glutaredoxin (thioltransferase)
GNAQ guanine nucleotide binding protein (G protein), q polypeptide
GNE glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase
GNPNAT1 glucosamine-phosphate N-acetyltransferase 1
GOLPH3 golgi phosphoprotein 3 (coat-protein)
GPM6A glycoprotein M6A
HAMP hepcidin antimicrobial peptide
HELB helicase (DNA) B
HIPK3 homeodomain interacting protein kinase 3
HIVEP1 human immunodeficiency virus type I enhancer binding protein 1
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2
HNRNPF heterogeneous nuclear ribonucleoprotein F
HOOK1 hook microtubule-tethering protein 1
HRG histidine-rich glycoprotein
ID1 inhibitor of DNA binding 1, dominant negative helix-loop-helix protein
IFNAR1 interferon (alpha, beta and omega) receptor 1
IFNW1 interferon, omega 1
IL1R1 interleukin 1 receptor, type I
IL1RAP interleukin 1 receptor accessory protein
INS-IGF2 INS-IGF2 readthrough
INTS10 integrator complex subunit 10
IRF1 interferon regulatory factor 1
IRF2BPL interferon regulatory factor 2 binding protein-like
ISOC1 isochorismatase domain containing 1
JAGN1 jagunal homolog 1 (Drosophila)
KBTBD11 kelch repeat and BTB (POZ) domain containing 11
KCNA7 potassium channel, voltage gated shaker related subfamily A, member 7
KCNK16 potassium channel, two pore domain subfamily K, member 16
KDM7A lysine (K)-specific demethylase 7A
KDSR 3-ketodihydrosphingosine reductase
KIAA0040 KIAA0040
KLF11 Kruppel-like factor 11
KLHL15 kelch-like family member 15
LARP1B La ribonucleoprotein domain family, member 1B
LARP4 La ribonucleoprotein domain family, member 4
LIN7C lin-7 homolog C (C. elegans)
LINC01554 long intergenic non-protein coding RNA 1554
LNX2 ligand of numb-protein X 2
LOC100133669 uncharacterized LOC100133669
LOC145474 uncharacterized LOC145474
LOC152225 uncharacterized LOC152225
LOC401127 WD repeat domain 5 pseudogene
LOC644172 mitogen-activated protein kinase 8 interacting protein 1 pseudogene
LONRF1 LON peptidase N-terminal domain and ring finger 1
LRCH1 leucine-rich repeats and calponin homology (CH) domain containing 1
LRG1 leucine-rich alpha-2-glycoprotein 1
LRIT2 leucine-rich repeat, immunoglobulin-like and transmembrane domains 2
LRRFIP2 leucine rich repeat (in FLII) interacting protein 2
LRRN3 leucine rich repeat neuronal 3
LYSMD2 LysM, putative peptidoglycan-binding, domain containing 2
LYVE1 lymphatic vessel endothelial hyaluronan receptor 1
MAK male germ cell-associated kinase
MAN1A1 mannosidase, alpha, class 1A, member 1
MAOB monoamine oxidase B
MAP2K4 mitogen-activated protein kinase kinase 4
MAT1A methionine adenosyltransferase I, alpha
MBNL2 muscleblind-like splicing regulator 2
MCL1 myeloid cell leukemia 1
METAP2 methionyl aminopeptidase 2
METTL7A methyltransferase like 7A
MIDN midnolin
MIER1 mesoderm induction early response 1, transcriptional regulator
MIP major intrinsic protein of lens fiber
MMAA methylmalonic aciduria (cobalamin deficiency) cblA type
MMRN1 multimerin 1
MRPL32 mitochondrial ribosomal protein L32
MSMO1 methylsterol monooxygenase 1
MT1F metallothionein 1F
MT1G metallothionein 1G
MT1H metallothionein 1H
MT1X metallothionein 1X
MTRR 5-methyltetrahydrofolate-homocysteine methyltransferase reductase
MTUS2 microtubule associated tumor suppressor candidate 2
MYADM myeloid-associated differentiation marker
MYCT1 myc target 1
MYO1B myosin IB
NAA30 N(alpha)-acetyltransferase 30, NatC catalytic subunit
NAAA N-acylethanolamine acid amidase
NADK2 NAD kinase 2, mitochondrial
NAMPT nicotinamide phosphoribosyltransferase
NCKAP5 NCK-associated protein 5
NCOA7 nuclear receptor coactivator 7
NFATC2 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2
NFE2L2 nuclear factor, erythroid 2-like 2
NFIL3 nuclear factor, interleukin 3 regulated
NHLRC2 NHL repeat containing 2
NIP7 NIP7, nucleolar pre-rRNA processing protein
NKAIN1 Na+/K+ transporting ATPase interacting 1
NKIRAS1 NFKB inhibitor interacting Ras-like 1
NKX3-1 NK3 homeobox 1
NNMT nicotinamide N-methyltransferase
NPHP3-AS1 NPHP3 antisense RNA 1
NPY1R neuropeptide Y receptor Y1
NR1H4 nuclear receptor subfamily 1, group H, member 4
NR3C2 nuclear receptor subfamily 3, group C, member 2
NRBF2 nuclear receptor binding factor 2
NSUN6 NOP2/Sun domain family, member 6
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2
OIT3 oncoprotein induced transcript 3
OR2B11 olfactory receptor, family 2, subfamily B, member 11
OR3A3 olfactory receptor, family 3, subfamily A, member 3
OR4Q3 olfactory receptor, family 4, subfamily Q, member 3
OR5AK2 olfactory receptor, family 5, subfamily AK, member 2
OTUD1 OTU deubiquitinase 1
P4HA3 prolyl 4-hydroxylase, alpha polypeptide III
PAK2 p21 protein (Cdc42/Rac)-activated kinase 2
PALM2 paralemmin 2
PALM2-AKAP2 PALM2-AKAP2 readthrough
PDC phosducin
PDE12 phosphodiesterase 12
PDLIM5 PDZ and LIM domain 5
PELI1 pellino E3 ubiquitin protein ligase 1
PGGT1B protein geranylgeranyltransferase type I, beta subunit
PHLDA1 pleckstrin homology-like domain, family A, member 1
PIM1 Pim-1 proto-oncogene, serine/threonine kinase
PIM3 Pim-3 proto-oncogene, serine/threonine kinase
PLEKHA4 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4
PLK2 polo-like kinase 2
PLSCR1 phospholipid scramblase 1
PLSCR4 phospholipid scramblase 4
PNRC1 proline-rich nuclear receptor coactivator 1
POU6F2 POU class 6 homeobox 2
PPAP2B phosphatidic acid phosphatase type 2B
PPAPDC2 phosphatidic acid phosphatase type 2 domain containing 2
PPIL4 peptidylprolyl isomerase (cyclophilin)-like 4
PPP1R3C protein phosphatase 1, regulatory subunit 3C
PPP2CB protein phosphatase 2, catalytic subunit, beta isozyme
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme
PPP3R1 protein phosphatase 3, regulatory subunit B, alpha
PPRC1 peroxisome proliferator-activated receptor gamma, coactivator-related 1
PRKAA1 protein kinase, AMP-activated, alpha 1 catalytic subunit
PROSC proline synthetase co-transcribed homolog (bacterial)
PRRG4 proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)
PTPN3 protein tyrosine phosphatase, non-receptor type 3
PVALB parvalbumin
RAB12 RAB12, member RAS oncogene family
RAB14 RAB14, member RAS oncogene family
RAB21 RAB21, member RAS oncogene family
RAB27A RAB27A, member RAS oncogene family
RAB33B RAB33B, member RAS oncogene family
RAB5A RAB5A, member RAS oncogene family
RALGDS ral guanine nucleotide dissociation stimulator
RAP1B RAP1B, member of RAS oncogene family
RASGEF1B RasGEF domain family, member 1B
RASL10A RAS-like, family 10, member A
RBM7 RNA binding motif protein 7
RBMXL1 RNA binding motif protein, X-linked-like 1
RCVRN recoverin
RFX2 regulatory factor X, 2 (influences HLA class II expression)
RGN regucalcin
RIPK1 receptor (TNFRSF)-interacting serine-threonine kinase 1
RNF146 ring finger protein 146
ROM1 retinal outer segment membrane protein 1
RPRD1B regulation of nuclear pre-mRNA domain containing 1B
RPS6KA5 ribosomal protein S6 kinase, 90kDa, polypeptide 5
RRN3 RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)
S100A12 S100 calcium binding protein A12
SAA4 serum amyloid A4, constitutive
SDC4 syndecan 4
SEC14L1 SEC14-like 1 (S. cerevisiae)
SEH1L SEH1-like (S. cerevisiae)
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B
SERPINA10 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10
SERPINB9 serpin peptidase inhibitor, clade B (ovalbumin), member 9
SETD3 SET domain containing 3
SGK1 serum/glucocorticoid regulated kinase 1
SGMS2 sphingomyelin synthase 2
SGPP1 sphingosine-1-phosphate phosphatase 1
SLC30A1 solute carrier family 30 (zinc transporter), member 1
SLC38A2 solute carrier family 38, member 2
SLC39A14 solute carrier family 39 (zinc transporter), member 14
SLC41A2 solute carrier family 41 (magnesium transporter), member 2
SMIM14 small integral membrane protein 14
SOCS1 suppressor of cytokine signaling 1
SOCS3 suppressor of cytokine signaling 3
SOX17 SRY (sex determining region Y)-box 17
SOX7 SRY (sex determining region Y)-box 7
SPG20 spastic paraplegia 20 (Troyer syndrome)
SRD5A2 steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)
SRSF3 serine/arginine-rich splicing factor 3
SRSF8 serine/arginine-rich splicing factor 8
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor)
STATH statherin
STRN3 striatin, calmodulin binding protein 3
STYX serine/threonine/tyrosine interacting protein
SV2C synaptic vesicle glycoprotein 2C
TAPT1 transmembrane anterior posterior transformation 1
TBC1D15 TBC1 domain family, member 15
TCEB3C transcription elongation factor B polypeptide 3C (elongin A3)
TCP11L2 t-complex 11, testis-specific-like 2
TERF2IP telomeric repeat binding factor 2, interacting protein
TFPI2 tissue factor pathway inhibitor 2
TGFBR3 transforming growth factor, beta receptor III
THAP5 THAP domain containing 5
THNSL1 threonine synthase-like 1 (S. cerevisiae)
THPO thrombopoietin
THRB thyroid hormone receptor, beta
TIFA TRAF-interacting protein with forkhead-associated domain
TJP2 tight junction protein 2
TLE3 transducin-like enhancer of split 3
TMEM263 transmembrane protein 263
TMPRSS11F transmembrane protease, serine 11F
TMPRSS12 transmembrane (C-terminal) protease, serine 12
TNFRSF10D tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain
TNFRSF1A tumor necrosis factor receptor superfamily, member 1A
TPPP2 tubulin polymerization-promoting protein family member 2
TPRX1 tetra-peptide repeat homeobox 1
TPST1 tyrosylprotein sulfotransferase 1
TRAM2 translocation associated membrane protein 2
TSC22D2 TSC22 domain family, member 2
TSLP thymic stromal lymphopoietin
TSPAN7 tetraspanin 7
TVP23B trans-golgi network vesicle protein 23 homolog B (S. cerevisiae)
UBE2D3 ubiquitin-conjugating enzyme E2D 3
UBE2NL ubiquitin-conjugating enzyme E2N-like (gene/pseudogene)
UTP3 UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)
VNN3 vanin 3
WDR36 WD repeat domain 36
WDR72 WD repeat domain 72
WDR89 WD repeat domain 89
WFDC10B WAP four-disulfide core domain 10B
XBP1 X-box binding protein 1
YES1 YES proto-oncogene 1, Src family tyrosine kinase
YTHDF2 YTH N(6)-methyladenosine RNA binding protein 2
ZBTB2 zinc finger and BTB domain containing 2
ZBTB21 zinc finger and BTB domain containing 21
ZC2HC1C zinc finger, C2HC-type containing 1C
ZCCHC24 zinc finger, CCHC domain containing 24
ZFP36L1 ZFP36 ring finger protein-like 1
ZFY zinc finger protein, Y-linked
ZNF542P zinc finger protein 542, pseudogene
ZNF654 zinc finger protein 654
ZNF800 zinc finger protein 800
ZNF878 zinc finger protein 878
ZPBP zona pellucida binding protein

low expression

Symbol Name
PCNXL3 pecanex-like 3 (Drosophila)