Liver hepatocellular carcinoma_LIHC_TCGA-2Y-A9GV-01A-11R-A38B-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Liver hepatocellular carcinoma_LIHC (The Cancer Genome Atlas)
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Genes

321 genes with high or low expression in Liver hepatocellular carcinoma_LIHC_TCGA-2Y-A9GV-01A-11R-A38B-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
AADACL2 arylacetamide deacetylase-like 2
ACCS 1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)
ACOT12 acyl-CoA thioesterase 12
ACTRT3 actin-related protein T3
AGAP11 ankyrin repeat and GTPase domain Arf GTPase activating protein 11
AJUBA ajuba LIM protein
AKTIP AKT interacting protein
ALG10B ALG10B, alpha-1,2-glucosyltransferase
ALK anaplastic lymphoma receptor tyrosine kinase
ALPK1 alpha-kinase 1
AMZ1 archaelysin family metallopeptidase 1
ANKRD12 ankyrin repeat domain 12
ANKRD31 ankyrin repeat domain 31
APOL6 apolipoprotein L, 6
ATAD3C ATPase family, AAA domain containing 3C
ATF7IP2 activating transcription factor 7 interacting protein 2
AVPR1A arginine vasopressin receptor 1A
AVPR2 arginine vasopressin receptor 2
BCL2A1 BCL2-related protein A1
BCO1 beta-carotene oxygenase 1
BMS1P5 BMS1 ribosome biogenesis factor pseudogene 5
BRWD1 bromodomain and WD repeat domain containing 1
BTBD19 BTB (POZ) domain containing 19
BTN2A3P butyrophilin, subfamily 2, member A3, pseudogene
BTN3A1 butyrophilin, subfamily 3, member A1
BTN3A2 butyrophilin, subfamily 3, member A2
BTN3A3 butyrophilin, subfamily 3, member A3
C11ORF87 chromosome 11 open reading frame 87
C14ORF178 chromosome 14 open reading frame 178
C19ORF12 chromosome 19 open reading frame 12
C1ORF168 chromosome 1 open reading frame 168
C20ORF144 chromosome 20 open reading frame 144
C3ORF36 chromosome 3 open reading frame 36
C3P1 complement component 3 precursor pseudogene
C4A complement component 4A (Rodgers blood group)
C5ORF24 chromosome 5 open reading frame 24
C6ORF201 chromosome 6 open reading frame 201
CALR calreticulin
CAPN3 calpain 3, (p94)
CAPS2 calcyphosine 2
CARF calcium responsive transcription factor
CCL8 chemokine (C-C motif) ligand 8
CD209 CD209 molecule
CD28 CD28 molecule
CEACAM20 carcinoembryonic antigen-related cell adhesion molecule 20
CEACAM22P carcinoembryonic antigen-related cell adhesion molecule 22, pseudogene
CFAP57 cilia and flagella associated protein 57
CFB complement factor B
CGNL1 cingulin-like 1
CHRNA4 cholinergic receptor, nicotinic, alpha 4 (neuronal)
CLEC4GP1 C-type lectin domain family 4, member G pseudogene 1
CLUHP3 clustered mitochondria (cluA/CLU1) homolog pseudogene 3
CMAHP cytidine monophospho-N-acetylneuraminic acid hydroxylase, pseudogene
CMPK1 cytidine monophosphate (UMP-CMP) kinase 1, cytosolic
CNTD2 cyclin N-terminal domain containing 2
CNTLN centlein, centrosomal protein
COL15A1 collagen, type XV, alpha 1
COL5A3 collagen, type V, alpha 3
COMT catechol-O-methyltransferase
CPEB3 cytoplasmic polyadenylation element binding protein 3
CROCC ciliary rootlet coiled-coil, rootletin
CROCCP2 ciliary rootlet coiled-coil, rootletin pseudogene 2
CSAD cysteine sulfinic acid decarboxylase
CYP2U1 cytochrome P450, family 2, subfamily U, polypeptide 1
CYTL1 cytokine-like 1
DCDC2B doublecortin domain containing 2B
DHX58 DEXH (Asp-Glu-X-His) box polypeptide 58
DLEC1 deleted in lung and esophageal cancer 1
DNAJC24 DnaJ (Hsp40) homolog, subfamily C, member 24
DNHD1 dynein heavy chain domain 1
DTWD2 DTW domain containing 2
EFNA2 ephrin-A2
EGOT eosinophil granule ontogeny transcript (non-protein coding)
EIF4E3 eukaryotic translation initiation factor 4E family member 3
ELFN1 extracellular leucine-rich repeat and fibronectin type III domain containing 1
EME2 essential meiotic structure-specific endonuclease subunit 2
ENPEP glutamyl aminopeptidase (aminopeptidase A)
ENPP4 ectonucleotide pyrophosphatase/phosphodiesterase 4 (putative)
EPX eosinophil peroxidase
ERAS ES cell expressed Ras
ERICH3 glutamate-rich 3
ESPNP espin pseudogene
EVL Enah/Vasp-like
F13A1 coagulation factor XIII, A1 polypeptide
FAM198A family with sequence similarity 198, member A
FAM35BP family with sequence similarity 35, member A pseudogene
FAM35DP family with sequence similarity 35, member A pseudogene
FAM53A family with sequence similarity 53, member A
FAM99A family with sequence similarity 99, member A (non-protein coding)
FAM99B family with sequence similarity 99, member B (non-protein coding)
FBXO9 F-box protein 9
FCAMR Fc receptor, IgA, IgM, high affinity
FCHO2 FCH domain only 2
FES FES proto-oncogene, tyrosine kinase
FGF16 fibroblast growth factor 16
FICD FIC domain containing
FKSG29 FKSG29
FLJ33360 FLJ33360 protein
FOXN4 forkhead box N4
FYCO1 FYVE and coiled-coil domain containing 1
GALNT9 polypeptide N-acetylgalactosaminyltransferase 9
GATM glycine amidinotransferase (L-arginine:glycine amidinotransferase)
GBP7 guanylate binding protein 7
GCKR glucokinase (hexokinase 4) regulator
GDPD4 glycerophosphodiester phosphodiesterase domain containing 4
GEN1 GEN1 Holliday junction 5' flap endonuclease
GJB2 gap junction protein, beta 2, 26kDa
GMDS GDP-mannose 4,6-dehydratase
GMPPB GDP-mannose pyrophosphorylase B
GNAO1 guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O
GOLGA1 golgin A1
GOLGA6A golgin A6 family, member A
GOLGA6B golgin A6 family, member B
GOLGA6C golgin A6 family, member C
GOLGA6D golgin A6 family, member D
GOLGA8G golgin A8 family, member G
GPD1 glycerol-3-phosphate dehydrogenase 1 (soluble)
GPR180 G protein-coupled receptor 180
GPR45 G protein-coupled receptor 45
GRK7 G protein-coupled receptor kinase 7
HAPLN4 hyaluronan and proteoglycan link protein 4
HCFC2 host cell factor C2
HCG4 HLA complex group 4 (non-protein coding)
HEATR4 HEAT repeat containing 4
HEATR5A HEAT repeat containing 5A
HERPUD1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1
HERPUD2 HERPUD family member 2
HLA-A major histocompatibility complex, class I, A
HLA-B major histocompatibility complex, class I, B
HLA-E major histocompatibility complex, class I, E
HLA-H major histocompatibility complex, class I, H (pseudogene)
HPS5 Hermansky-Pudlak syndrome 5
HYAL3 hyaluronoglucosaminidase 3
ICAM5 intercellular adhesion molecule 5, telencephalin
IDO2 indoleamine 2,3-dioxygenase 2
IFITM5 interferon induced transmembrane protein 5
IGF1 insulin-like growth factor 1 (somatomedin C)
IGFALS insulin-like growth factor binding protein, acid labile subunit
IGIP IgA-inducing protein
IGSF9 immunoglobulin superfamily, member 9
IKZF2 IKAROS family zinc finger 2 (Helios)
INVS inversin
IP6K3 inositol hexakisphosphate kinase 3
IQSEC3 IQ motif and Sec7 domain 3
ISM1 isthmin 1, angiogenesis inhibitor
KBTBD11 kelch repeat and BTB (POZ) domain containing 11
KBTBD13 kelch repeat and BTB (POZ) domain containing 13
KCNQ1OT1 KCNQ1 opposite strand/antisense transcript 1 (non-protein coding)
KCTD20 potassium channel tetramerization domain containing 20
KDM8 lysine (K)-specific demethylase 8
KHDRBS2 KH domain containing, RNA binding, signal transduction associated 2
KLHL31 kelch-like family member 31
KLHL40 kelch-like family member 40
KRTAP10-6 keratin associated protein 10-6
LIG4 ligase IV, DNA, ATP-dependent
LILRB5 leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 5
LINC00161 long intergenic non-protein coding RNA 161
LINC00264 long intergenic non-protein coding RNA 264
LINC01599 long intergenic non-protein coding RNA 1599
LMAN1 lectin, mannose-binding, 1
LOC100128573 uncharacterized LOC100128573
LOC100130238 uncharacterized LOC100130238
LOC100132215 uncharacterized LOC100132215
LOC100272216 uncharacterized LOC100272216
LOC286359 uncharacterized LOC286359
LOC340017 uncharacterized LOC340017
LOC613037 nuclear pore complex interacting protein pseudogene
LOC643486
LOC646214 p21 protein (Cdc42/Rac)-activated kinase 2 pseudogene
LOC646471 uncharacterized LOC646471
LOC728989 phosphodiesterase 4D interacting protein pseudogene
LOC90834
LOXHD1 lipoxygenase homology domains 1
LPAL2 lipoprotein, Lp(a)-like 2, pseudogene
LRP1B low density lipoprotein receptor-related protein 1B
LRRC3 leucine rich repeat containing 3
LRRC43 leucine rich repeat containing 43
LRSAM1 leucine rich repeat and sterile alpha motif containing 1
LTF lactotransferrin
LURAP1 leucine rich adaptor protein 1
MAN1A1 mannosidase, alpha, class 1A, member 1
MAPK14 mitogen-activated protein kinase 14
MARCH4 membrane-associated ring finger (C3HC4) 4, E3 ubiquitin protein ligase
MBL1P mannose-binding lectin (protein A) 1, pseudogene
MEGF9 multiple EGF-like-domains 9
MFSD9 major facilitator superfamily domain containing 9
MGARP mitochondria-localized glutamic acid-rich protein
MGAT2 mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase
MGRN1 mahogunin ring finger 1, E3 ubiquitin protein ligase
MICAL3 microtubule associated monooxygenase, calponin and LIM domain containing 3
MICU3 mitochondrial calcium uptake family, member 3
MLXIP MLX interacting protein
MOGAT2 monoacylglycerol O-acyltransferase 2
MS4A14 membrane-spanning 4-domains, subfamily A, member 14
MST1P2 macrophage stimulating 1 (hepatocyte growth factor-like) pseudogene 2
MYLK4 myosin light chain kinase family, member 4
MYO5B myosin VB
NBPF1 neuroblastoma breakpoint family, member 1
NCAM2 neural cell adhesion molecule 2
NLRP6 NLR family, pyrin domain containing 6
NNAT neuronatin
NOXRED1 NADP-dependent oxidoreductase domain containing 1
NPPA natriuretic peptide A
NUS1 nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)
ODF3 outer dense fiber of sperm tails 3
OLFM2 olfactomedin 2
OMP olfactory marker protein
OR10J3 olfactory receptor, family 10, subfamily J, member 3
OR2A1 olfactory receptor, family 2, subfamily A, member 1
OR2B3 olfactory receptor, family 2, subfamily B, member 3
OR2C1 olfactory receptor, family 2, subfamily C, member 1
OR2F1 olfactory receptor, family 2, subfamily F, member 1 (gene/pseudogene)
PAN2 PAN2 poly(A) specific ribonuclease subunit
PATE4 prostate and testis expressed 4
PATL2 protein associated with topoisomerase II homolog 2 (yeast)
PCDHA13 protocadherin alpha 13
PHYKPL 5-phosphohydroxy-L-lysine phospho-lyase
PIK3C2G phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 gamma
PITPNM2 phosphatidylinositol transfer protein, membrane-associated 2
PKD1L3 polycystic kidney disease 1-like 3
PKD2L2 polycystic kidney disease 2-like 2
PMS2CL PMS2 C-terminal like pseudogene
PNPLA3 patatin-like phospholipase domain containing 3
POLE polymerase (DNA directed), epsilon, catalytic subunit
POU4F3 POU class 4 homeobox 3
PPP4R4 protein phosphatase 4, regulatory subunit 4
PRAMEF11 PRAME family member 11
PRAMEF4 PRAME family member 4
PRAMEF5 PRAME family member 5
PRAMEF9 PRAME family member 9
PRB4 proline-rich protein BstNI subfamily 4
PRG4 proteoglycan 4
PRKCE protein kinase C, epsilon
PRO0611 PRO0611 protein
PRRT4 proline-rich transmembrane protein 4
PRSS53 protease, serine, 53
PUS10 pseudouridylate synthase 10
RASA4 RAS p21 protein activator 4
RCAN2 regulator of calcineurin 2
REPS2 RALBP1 associated Eps domain containing 2
RNASE13 ribonuclease, RNase A family, 13 (non-active)
RNF141 ring finger protein 141
RNF144B ring finger protein 144B
RPRD1B regulation of nuclear pre-mRNA domain containing 1B
RPS15AP10 ribosomal protein S15a pseudogene 10
RREB1 ras responsive element binding protein 1
SAA2 serum amyloid A2
SAMD4A sterile alpha motif domain containing 4A
SEC16A SEC16 homolog A (S. cerevisiae)
SEC24A SEC24 family member A
SEC24D SEC24 family member D
SEC31B SEC31 homolog B (S. cerevisiae)
SEC61A2 Sec61 alpha 2 subunit (S. cerevisiae)
SEL1L sel-1 suppressor of lin-12-like (C. elegans)
SELE selectin E
SFTA1P surfactant associated 1, pseudogene
SH2B3 SH2B adaptor protein 3
SH3RF2 SH3 domain containing ring finger 2
SHROOM1 shroom family member 1
SLAMF9 SLAM family member 9
SLC10A6 solute carrier family 10 (sodium/bile acid cotransporter), member 6
SLC17A2 solute carrier family 17, member 2
SLC22A7 solute carrier family 22 (organic anion transporter), member 7
SLC25A27 solute carrier family 25, member 27
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37
SLC25A52 solute carrier family 25, member 52
SLC28A1 solute carrier family 28 (concentrative nucleoside transporter), member 1
SLC2A10 solute carrier family 2 (facilitated glucose transporter), member 10
SLC38A8 solute carrier family 38, member 8
SLC39A14 solute carrier family 39 (zinc transporter), member 14
SLC46A3 solute carrier family 46, member 3
SLCO2A1 solute carrier organic anion transporter family, member 2A1
SLFN14 schlafen family member 14
SLITRK3 SLIT and NTRK-like family, member 3
SMAD1 SMAD family member 1
SNORD1C small nucleolar RNA, C/D box 1C
SPDYE5 speedy/RINGO cell cycle regulator family member E5
SPG20 spastic paraplegia 20 (Troyer syndrome)
STAG3L3 stromal antigen 3-like 3 (pseudogene)
STK19 serine/threonine kinase 19
STX17 syntaxin 17
SYNE2 spectrin repeat containing, nuclear envelope 2
SYT7 synaptotagmin VII
TANGO6 transport and golgi organization 6 homolog (Drosophila)
TAPBP TAP binding protein (tapasin)
TAS2R42 taste receptor, type 2, member 42
TAS2R8 taste receptor, type 2, member 8
TBC1D14 TBC1 domain family, member 14
TDRD6 tudor domain containing 6
TMEM50B transmembrane protein 50B
TNFAIP1 tumor necrosis factor, alpha-induced protein 1 (endothelial)
TNK2 tyrosine kinase, non-receptor, 2
TPH2 tryptophan hydroxylase 2
TRIM66 tripartite motif containing 66
TRIM9 tripartite motif containing 9
TRPM7 transient receptor potential cation channel, subfamily M, member 7
TSTD2 thiosulfate sulfurtransferase (rhodanese)-like domain containing 2
TTBK1 tau tubulin kinase 1
TTC25 tetratricopeptide repeat domain 25
TTC28 tetratricopeptide repeat domain 28
TTLL13P tubulin tyrosine ligase-like family member 13, pseudogene
TTPAL tocopherol (alpha) transfer protein-like
UBE2J1 ubiquitin-conjugating enzyme E2, J1
UBE2Q2P1 ubiquitin-conjugating enzyme E2Q family member 2 pseudogene 1
ULBP3 UL16 binding protein 3
ULK1 unc-51 like autophagy activating kinase 1
VKORC1 vitamin K epoxide reductase complex, subunit 1
WNT3 wingless-type MMTV integration site family, member 3
XG Xg blood group
ZC3H3 zinc finger CCCH-type containing 3
ZCCHC14 zinc finger, CCHC domain containing 14
ZNF417 zinc finger protein 417
ZNF676 zinc finger protein 676
ZNF843 zinc finger protein 843
ZSCAN12P1 zinc finger and SCAN domain containing 12 pseudogene 1
ZW10 zw10 kinetochore protein
ZXDC ZXD family zinc finger C

low expression

Symbol Name
DDX47 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47
FAM204A family with sequence similarity 204, member A
UBE2R2 ubiquitin-conjugating enzyme E2R 2
VTI1A vesicle transport through interaction with t-SNAREs 1A