Liver hepatocellular carcinoma_LIHC_TCGA-2Y-A9GS-01A-12R-A38B-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Liver hepatocellular carcinoma_LIHC (The Cancer Genome Atlas)
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Genes

385 genes with high or low expression in Liver hepatocellular carcinoma_LIHC_TCGA-2Y-A9GS-01A-12R-A38B-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
AARS alanyl-tRNA synthetase
ADAM7 ADAM metallopeptidase domain 7
ADCY10 adenylate cyclase 10 (soluble)
ADCY9 adenylate cyclase 9
AGO1 argonaute RISC catalytic component 1
AGO4 argonaute RISC catalytic component 4
AHNAK AHNAK nucleoprotein
AKR1B10 aldo-keto reductase family 1, member B10 (aldose reductase)
AKR1B15 aldo-keto reductase family 1, member B15
AKR1C1 aldo-keto reductase family 1, member C1
AKR1C2 aldo-keto reductase family 1, member C2
AKR1C3 aldo-keto reductase family 1, member C3
AKR1C6P aldo-keto reductase family 1, member C6, pseudogene
AKR1E2 aldo-keto reductase family 1, member E2
ALDH1L1 aldehyde dehydrogenase 1 family, member L1
ALOX12P2 arachidonate 12-lipoxygenase pseudogene 2
AMELY amelogenin, Y-linked
AP4E1 adaptor-related protein complex 4, epsilon 1 subunit
AP4S1 adaptor-related protein complex 4, sigma 1 subunit
AQR aquarius intron-binding spliceosomal factor
ARHGAP11A Rho GTPase activating protein 11A
ARHGAP11B Rho GTPase activating protein 11B
ARL13A ADP-ribosylation factor-like 13A
ARPIN actin-related protein 2/3 complex inhibitor
ARPP19 cAMP-regulated phosphoprotein, 19kDa
ASB9 ankyrin repeat and SOCS box containing 9
ASCC3 activating signal cointegrator 1 complex subunit 3
ATL3 atlastin GTPase 3
ATP1A1-AS1 ATP1A1 antisense RNA 1
BACH1 BTB and CNC homology 1, basic leucine zipper transcription factor 1
BAG4 BCL2-associated athanogene 4
BAP1 BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase)
BCAR3 breast cancer anti-estrogen resistance 3
BLID BH3-like motif containing, cell death inducer
BUB1B BUB1 mitotic checkpoint serine/threonine kinase B
C11ORF94 chromosome 11 open reading frame 94
C15ORF62 chromosome 15 open reading frame 62
C17ORF47 chromosome 17 open reading frame 47
C17ORF78 chromosome 17 open reading frame 78
C1ORF146 chromosome 1 open reading frame 146
C1ORF177 chromosome 1 open reading frame 177
C20ORF144 chromosome 20 open reading frame 144
C22ORF15 chromosome 22 open reading frame 15
CAP2 CAP, adenylate cyclase-associated protein, 2 (yeast)
CASC5 cancer susceptibility candidate 5
CATSPER2 cation channel, sperm associated 2
CATSPER2P1 cation channel, sperm associated 2 pseudogene 1
CCDC110 coiled-coil domain containing 110
CCDC112 coiled-coil domain containing 112
CCDC15 coiled-coil domain containing 15
CCDC17 coiled-coil domain containing 17
CD200R1L CD200 receptor 1-like
CDRT1 CMT1A duplicated region transcript 1
CDT1 chromatin licensing and DNA replication factor 1
CDV3 CDV3 homolog (mouse)
CEACAM1 carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)
CEP104 centrosomal protein 104kDa
CEP152 centrosomal protein 152kDa
CES1 carboxylesterase 1
CES1P1 carboxylesterase 1 pseudogene 1
CGN cingulin
CKAP2L cytoskeleton associated protein 2-like
CNOT1 CCR4-NOT transcription complex, subunit 1
CNTNAP4 contactin associated protein-like 4
COCH cochlin
CRYBA1 crystallin, beta A1
CSPG5 chondroitin sulfate proteoglycan 5 (neuroglycan C)
CYFIP1 cytoplasmic FMR1 interacting protein 1
CYP4X1 cytochrome P450, family 4, subfamily X, polypeptide 1
DALRD3 DALR anticodon binding domain containing 3
DCAF4L2 DDB1 and CUL4 associated factor 4-like 2
DCX doublecortin
DDHD2 DDHD domain containing 2
DDX43 DEAD (Asp-Glu-Ala-Asp) box polypeptide 43
DDX53 DEAD (Asp-Glu-Ala-Asp) box polypeptide 53
DET1 de-etiolated homolog 1 (Arabidopsis)
DHDDS dehydrodolichyl diphosphate synthase
DNAH6 dynein, axonemal, heavy chain 6
DNM1P35 dynamin 1 pseudogene 35
DPH6 diphthamine biosynthesis 6
DPRXP4 divergent-paired related homeobox pseudogene 4
DPYSL4 dihydropyrimidinase-like 4
DTNA dystrobrevin, alpha
DTWD2 DTW domain containing 2
EDC3 enhancer of mRNA decapping 3
EFTUD1 elongation factor Tu GTP binding domain containing 1
EGFEM1P EGF-like and EMI domain containing 1, pseudogene
EIF4E3 eukaryotic translation initiation factor 4E family member 3
EMC1 ER membrane protein complex subunit 1
EPS15 epidermal growth factor receptor pathway substrate 15
EXOSC10 exosome component 10
FAM161B family with sequence similarity 161, member B
FAM218A family with sequence similarity 218, member A
FAM21A family with sequence similarity 21, member A
FAM83D family with sequence similarity 83, member D
FAM86C1 family with sequence similarity 86, member C1
FAM98B family with sequence similarity 98, member B
FANCA Fanconi anemia, complementation group A
FBXL22 F-box and leucine-rich repeat protein 22
FES FES proto-oncogene, tyrosine kinase
FGF16 fibroblast growth factor 16
FGF19 fibroblast growth factor 19
FGFR1OP FGFR1 oncogene partner
FGGY FGGY carbohydrate kinase domain containing
FN1 fibronectin 1
FPGT fucose-1-phosphate guanylyltransferase
FRMPD4 FERM and PDZ domain containing 4
FUNDC2P2 FUN14 domain containing 2 pseudogene 2
FYCO1 FYVE and coiled-coil domain containing 1
GALK2 galactokinase 2
GAS2 growth arrest-specific 2
GAS8 growth arrest-specific 8
GBP7 guanylate binding protein 7
GDAP1 ganglioside induced differentiation associated protein 1
GDPGP1 GDP-D-glucose phosphorylase 1
GGT7 gamma-glutamyltransferase 7
GJA10 gap junction protein, alpha 10, 62kDa
GLB1L3 galactosidase, beta 1-like 3
GLMN glomulin, FKBP associated protein
GLP2R glucagon-like peptide 2 receptor
GMCL1P1 germ cell-less, spermatogenesis associated 1 pseudogene 1
GPR158 G protein-coupled receptor 158
GPRIN1 G protein regulated inducer of neurite outgrowth 1
GREB1L growth regulation by estrogen in breast cancer-like
GSG1L GSG1-like
GSX1 GS homeobox 1
GTF2H2C GTF2H2 family member C
GTSF1 gametocyte specific factor 1
HARBI1 harbinger transposase derived 1
HAUS2 HAUS augmin-like complex, subunit 2
HEATR4 HEAT repeat containing 4
HERC2 HECT and RLD domain containing E3 ubiquitin protein ligase 2
HHIPL2 HHIP-like 2
HIST3H3 histone cluster 3, H3
HMMR hyaluronan-mediated motility receptor (RHAMM)
HMSD histocompatibility (minor) serpin domain containing
HSPA8 heat shock 70kDa protein 8
IFNAR2 interferon (alpha, beta and omega) receptor 2
IGHMBP2 immunoglobulin mu binding protein 2
INADL InaD-like (Drosophila)
INO80 INO80 complex subunit
IRGM immunity-related GTPase family, M
JADE3 jade family PHD finger 3
KBTBD8 kelch repeat and BTB (POZ) domain containing 8
KCNH4 potassium channel, voltage gated eag related subfamily H, member 4
KCNJ14 potassium channel, inwardly rectifying subfamily J, member 14
KDM4E lysine (K)-specific demethylase 4E
KHNYN KH and NYN domain containing
KIF1B kinesin family member 1B
KLF13 Kruppel-like factor 13
KLHL32 kelch-like family member 32
KNSTRN kinetochore-localized astrin/SPAG5 binding protein
KPNA7 karyopherin alpha 7 (importin alpha 8)
LANCL2 LanC lantibiotic synthetase component C-like 2 (bacterial)
LENEP lens epithelial protein
LINC00189 long intergenic non-protein coding RNA 189
LINC00244 long intergenic non-protein coding RNA 244
LINC01565 long intergenic non-protein coding RNA 1565
LOC100133331 uncharacterized LOC100133331
LOC286359 uncharacterized LOC286359
LOC401010 nucleolar complex associated 2 homolog (S. cerevisiae) pseudogene
LOC401052 uncharacterized LOC401052
LOC541473 FK506 binding protein 6, 36kDa pseudogene
LOC641367 cyclin Y-like 1 pseudogene
LOC644172 mitogen-activated protein kinase 8 interacting protein 1 pseudogene
LOC646813 DEAH (Asp-Glu-Ala-His) box helicase 9 pseudogene
MAGEA1 melanoma antigen family A1
MAGEA11 melanoma antigen family A11
MAGEA12 melanoma antigen family A12
MAGEB1 melanoma antigen family B1
MAGEB2 melanoma antigen family B2
MAGEB3 melanoma antigen family B3
MAN2C1 mannosidase, alpha, class 2C, member 1
MAP2 microtubule-associated protein 2
MAP3K13 mitogen-activated protein kinase kinase kinase 13
MBOAT1 membrane bound O-acyltransferase domain containing 1
MCM9 minichromosome maintenance complex component 9
ME1 malic enzyme 1, NADP(+)-dependent, cytosolic
MED24 mediator complex subunit 24
MFAP1 microfibrillar-associated protein 1
MINA MYC induced nuclear antigen
MKRN3 makorin ring finger protein 3
MMP15 matrix metallopeptidase 15 (membrane-inserted)
MORF4 mortality factor 4 (pseudogene)
MRGPRX2 MAS-related GPR, member X2
MRPL21 mitochondrial ribosomal protein L21
MS4A13 membrane-spanning 4-domains, subfamily A, member 13
MSH4 mutS homolog 4
MSL3P1 male-specific lethal 3 homolog (Drosophila) pseudogene 1
MTF1 metal-regulatory transcription factor 1
MYADML2 myeloid-associated differentiation marker-like 2
MYCBPAP MYCBP associated protein
MYO3B myosin IIIB
MYO5A myosin VA (heavy chain 12, myoxin)
MYO5B myosin VB
N4BP1 NEDD4 binding protein 1
NAA20 N(alpha)-acetyltransferase 20, NatB catalytic subunit
NAP1L6 nucleosome assembly protein 1-like 6
NBPF22P neuroblastoma breakpoint family, member 22, pseudogene
NCOA7 nuclear receptor coactivator 7
NDC1 NDC1 transmembrane nucleoporin
NECAB2 N-terminal EF-hand calcium binding protein 2
NEDD4 neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase
NEIL3 nei endonuclease VIII-like 3 (E. coli)
NEK4 NIMA-related kinase 4
NELL2 NEL-like 2 (chicken)
NLN neurolysin (metallopeptidase M3 family)
NUSAP1 nucleolar and spindle associated protein 1
NXF2 nuclear RNA export factor 2
NXF2B nuclear RNA export factor 2B
NXF5 nuclear RNA export factor 5
NYNRIN NYN domain and retroviral integrase containing
OCLN occludin
OIP5 Opa interacting protein 5
ONECUT2 one cut homeobox 2
OR14I1 olfactory receptor, family 14, subfamily I, member 1
OR2A14 olfactory receptor, family 2, subfamily A, member 14
OR2A25 olfactory receptor, family 2, subfamily A, member 25
OR2A9P olfactory receptor, family 2, subfamily A, member 9 pseudogene
OR4M2 olfactory receptor, family 4, subfamily M, member 2
OR4Q3 olfactory receptor, family 4, subfamily Q, member 3
OR52E6 olfactory receptor, family 52, subfamily E, member 6
OR5B21 olfactory receptor, family 5, subfamily B, member 21
OR5M8 olfactory receptor, family 5, subfamily M, member 8
OR8A1 olfactory receptor, family 8, subfamily A, member 1
OR8B3 olfactory receptor, family 8, subfamily B, member 3
OR8D1 olfactory receptor, family 8, subfamily D, member 1
ORAOV1 oral cancer overexpressed 1
OSGIN1 oxidative stress induced growth inhibitor 1
OTUD7A OTU deubiquitinase 7A
PAK2 p21 protein (Cdc42/Rac)-activated kinase 2
PANX2 pannexin 2
PAPPA2 pappalysin 2
PARP6 poly (ADP-ribose) polymerase family, member 6
PARS2 prolyl-tRNA synthetase 2, mitochondrial (putative)
PDIA3 protein disulfide isomerase family A, member 3
PDIA3P1 protein disulfide isomerase family A, member 3 pseudogene 1
PDSS1 prenyl (decaprenyl) diphosphate synthase, subunit 1
PEX6 peroxisomal biogenesis factor 6
PGD phosphogluconate dehydrogenase
PHOSPHO2 phosphatase, orphan 2
PIF1 PIF1 5'-to-3' DNA helicase
PIK3CB phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta
PKN3 protein kinase N3
PLEKHH3 pleckstrin homology domain containing, family H (with MyTH4 domain) member 3
PLEKHN1 pleckstrin homology domain containing, family N member 1
POLR3E polymerase (RNA) III (DNA directed) polypeptide E (80kD)
POLR3G polymerase (RNA) III (DNA directed) polypeptide G (32kD)
PPARGC1B peroxisome proliferator-activated receptor gamma, coactivator 1 beta
PPIP5K1 diphosphoinositol pentakisphosphate kinase 1
PRC1 protein regulator of cytokinesis 1
PRKAG3 protein kinase, AMP-activated, gamma 3 non-catalytic subunit
PROP1 PROP paired-like homeobox 1
PROSC proline synthetase co-transcribed homolog (bacterial)
PRSS37 protease, serine, 37
PSME4 proteasome (prosome, macropain) activator subunit 4
PTGR2 prostaglandin reductase 2
PTGS1 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)
RAB11FIP1 RAB11 family interacting protein 1 (class I)
RAD51 RAD51 recombinase
RAET1K retinoic acid early transcript 1K pseudogene
RBM45 RNA binding motif protein 45
RBMY1A1 RNA binding motif protein, Y-linked, family 1, member A1
RBMY1E RNA binding motif protein, Y-linked, family 1, member E
RBMY1F RNA binding motif protein, Y-linked, family 1, member F
RBMY1J RNA binding motif protein, Y-linked, family 1, member J
RBMY2FP RNA binding motif protein, Y-linked, family 2, member F pseudogene
RCAN3 RCAN family member 3
RCC1 regulator of chromosome condensation 1
RCCD1 RCC1 domain containing 1
RFFL ring finger and FYVE-like domain containing E3 ubiquitin protein ligase
RNF213 ring finger protein 213
RNF217-AS1 RNF217 antisense RNA 1 (head to head)
RNF40 ring finger protein 40, E3 ubiquitin protein ligase
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila)
RPAP1 RNA polymerase II associated protein 1
RPAP2 RNA polymerase II associated protein 2
RPS6KA1 ribosomal protein S6 kinase, 90kDa, polypeptide 1
RPUSD2 RNA pseudouridylate synthase domain containing 2
RXFP2 relaxin/insulin-like family peptide receptor 2
SAA3P serum amyloid A3 pseudogene
SAMD5 sterile alpha motif domain containing 5
SCGB1C1 secretoglobin, family 1C, member 1
SCN8A sodium channel, voltage gated, type VIII alpha subunit
SCUBE1 signal peptide, CUB domain, EGF-like 1
SDR9C7 short chain dehydrogenase/reductase family 9C, member 7
SEMA4F sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F
SF3A1 splicing factor 3a, subunit 1, 120kDa
SF3B2 splicing factor 3b, subunit 2, 145kDa
SFMBT1 Scm-like with four mbt domains 1
SKIDA1 SKI/DACH domain containing 1
SLC2A12 solute carrier family 2 (facilitated glucose transporter), member 12
SLC44A5 solute carrier family 44, member 5
SLCO3A1 solute carrier organic anion transporter family, member 3A1
SMIM21 small integral membrane protein 21
SMTNL1 smoothelin-like 1
SNORA18 small nucleolar RNA, H/ACA box 18
SNORA52 small nucleolar RNA, H/ACA box 52
SPANXN2 SPANX family, member N2
SPANXN4 SPANX family, member N4
SPATA21 spermatogenesis associated 21
SPCS2 signal peptidase complex subunit 2 homolog (S. cerevisiae)
SPDYE3 speedy/RINGO cell cycle regulator family member E3
SPDYE6 speedy/RINGO cell cycle regulator family member E6
SPDYE8P speedy/RINGO cell cycle regulator family member E8, pseudogene
SPIN2A spindlin family, member 2A
SPPL2A signal peptide peptidase like 2A
SRXN1 sulfiredoxin 1
SSX1 synovial sarcoma, X breakpoint 1
STAG3L3 stromal antigen 3-like 3 (pseudogene)
STH saitohin
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein
SZT2 seizure threshold 2 homolog (mouse)
TACC1 transforming, acidic coiled-coil containing protein 1
TBC1D5 TBC1 domain family, member 5
TBL1Y transducin (beta)-like 1, Y-linked
TCEB3B transcription elongation factor B polypeptide 3B (elongin A2)
TCL6 T-cell leukemia/lymphoma 6 (non-protein coding)
TDGF1P3 teratocarcinoma-derived growth factor 1 pseudogene 3
TEX13B testis expressed 13B
TGIF2LY TGFB-induced factor homeobox 2-like, Y-linked
TINAG tubulointerstitial nephritis antigen
TIPIN TIMELESS interacting protein
TJP1 tight junction protein 1
TKT transketolase
TLK1 tousled-like kinase 1
TMEM241 transmembrane protein 241
TMEM243 transmembrane protein 243, mitochondrial
TMOD3 tropomodulin 3 (ubiquitous)
TOPAZ1 testis and ovary specific PAZ domain containing 1
TPCN2 two pore segment channel 2
TPI1P3 triosephosphate isomerase 1 pseudogene 3
TPPP tubulin polymerization promoting protein
TRIM21 tripartite motif containing 21
TRIM34 tripartite motif containing 34
TRIM6 tripartite motif containing 6
TRIM61 tripartite motif containing 61
TRIM68 tripartite motif containing 68
TRIP4 thyroid hormone receptor interactor 4
TRPV3 transient receptor potential cation channel, subfamily V, member 3
TSPY1 testis specific protein, Y-linked 1
TSPY2 testis specific protein, Y-linked 2
TSPY4 testis specific protein, Y-linked 4
TTC23 tetratricopeptide repeat domain 23
TTC31 tetratricopeptide repeat domain 31
TTC39B tetratricopeptide repeat domain 39B
TTTY6 testis-specific transcript, Y-linked 6 (non-protein coding)
UBR1 ubiquitin protein ligase E3 component n-recognin 1
UGT1A5 UDP glucuronosyltransferase 1 family, polypeptide A5
UGT2B4 UDP glucuronosyltransferase 2 family, polypeptide B4
UPK2 uroplakin 2
USP10 ubiquitin specific peptidase 10
USP13 ubiquitin specific peptidase 13 (isopeptidase T-3)
USP3 ubiquitin specific peptidase 3
USP48 ubiquitin specific peptidase 48
USP8 ubiquitin specific peptidase 8
UTP6 UTP6, small subunit (SSU) processome component, homolog (yeast)
VASH2 vasohibin 2
VHLL von Hippel-Lindau tumor suppressor-like
VSIG10L V-set and immunoglobulin domain containing 10 like
XIRP2 xin actin binding repeat containing 2
XK X-linked Kx blood group
ZC3HAV1 zinc finger CCCH-type, antiviral 1
ZCCHC14 zinc finger, CCHC domain containing 14
ZFP64 ZFP64 zinc finger protein
ZFP69B ZFP69 zinc finger protein B
ZNF14 zinc finger protein 14
ZNF253 zinc finger protein 253
ZNF48 zinc finger protein 48
ZNF534 zinc finger protein 534
ZNF592 zinc finger protein 592
ZNF609 zinc finger protein 609
ZNF644 zinc finger protein 644
ZNF674 zinc finger protein 674
ZNF716 zinc finger protein 716
ZNF735 zinc finger protein 735
ZNF774 zinc finger protein 774
ZSCAN20 zinc finger and SCAN domain containing 20
ZSWIM5 zinc finger, SWIM-type containing 5
ZW10 zw10 kinetochore protein
ZWILCH zwilch kinetochore protein
ZXDA zinc finger, X-linked, duplicated A

low expression

Symbol Name
KEAP1 kelch-like ECH-associated protein 1
PSMD5 proteasome (prosome, macropain) 26S subunit, non-ATPase, 5
SAR1A secretion associated, Ras related GTPase 1A