Lipoproteins, HDL Gene Set

Dataset dbGAP Gene-Trait Associations
Category disease or phenotype associations
Type trait
Description disease cluster belonging to disease group metabolic (Genetic Association Database)
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Genes

61 genes associated with the trait Lipoproteins, HDL in GWAS and other genetic association datasets from the dbGAP Gene-Trait Associations dataset.

Symbol Name Standardized Value
LPL lipoprotein lipase 1.57635
CETP cholesteryl ester transfer protein, plasma 1.47056
LIPC lipase, hepatic 1.46264
FADS1 fatty acid desaturase 1 1.07287
ZPR1 ZPR1 zinc finger 0.995026
GALNT2 polypeptide N-acetylgalactosaminyltransferase 2 0.807263
TTC39B tetratricopeptide repeat domain 39B 0.781064
CTCF CCCTC-binding factor (zinc finger protein) 0.726481
DPEP3 dipeptidase 3 0.710336
NR1H3 nuclear receptor subfamily 1, group H, member 3 0.702613
PRMT7 protein arginine methyltransferase 7 0.692328
NUTF2 nuclear transport factor 2 0.688993
ACP2 acid phosphatase 2, lysosomal 0.684056
C16ORF86 chromosome 16 open reading frame 86 0.655002
ENKD1 enkurin domain containing 1 0.655002
FHOD1 formin homology 2 domain containing 1 0.649859
TMEM208 transmembrane protein 208 0.625551
LRRC29 leucine rich repeat containing 29 0.625551
ELMO3 engulfment and cell motility 3 0.622107
E2F4 E2F transcription factor 4, p107/p130-binding 0.622107
EXOC3L1 exocyst complex component 3-like 1 0.621146
NOL3 nucleolar protein 3 (apoptosis repressor with CARD domain) 0.618532
PLA2G15 phospholipase A2, group XV 0.611166
GFOD2 glucose-fructose oxidoreductase domain containing 2 0.609816
DPEP2 dipeptidase 2 0.600394
NFATC3 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3 0.569509
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.552134
HNF4A hepatocyte nuclear factor 4, alpha 0.526477
PTPRJ protein tyrosine phosphatase, receptor type, J 0.477232
MYO1H myosin IH 0.406869
APOB apolipoprotein B 0.395094
VPS4A vacuolar protein sorting 4 homolog A (S. cerevisiae) 0.337189
HAS3 hyaluronan synthase 3 0.321471
MADD MAP-kinase activating death domain 0.294953
PLEKHG4 pleckstrin homology domain containing, family G (with RhoGef domain) member 4 0.272333
TMPRSS2 transmembrane protease, serine 2 0.259852
PCDH15 protocadherin-related 15 0.239185
METTL16 methyltransferase like 16 0.228431
DDB2 damage-specific DNA binding protein 2, 48kDa 0.228192
OR4C5 olfactory receptor, family 4, subfamily C, member 5 (gene/pseudogene) 0.2181
PABPC4 poly(A) binding protein, cytoplasmic 4 (inducible form) 0.202549
KCTD19 potassium channel tetramerization domain containing 19 0.199276
PLTP phospholipid transfer protein 0.196085
SLC9A5 solute carrier family 9, subfamily A (NHE5, cation proton antiporter 5), member 5 0.19433
LRRC36 leucine rich repeat containing 36 0.185095
SMPD3 sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II) 0.161169
CMYA5 cardiomyopathy associated 5 0.157501
DPP10 dipeptidyl-peptidase 10 (non-functional) 0.157501
SNTB2 syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2) 0.155303
RYR2 ryanodine receptor 2 (cardiac) 0.153239
CTNNA2 catenin (cadherin-associated protein), alpha 2 0.151003
FAM134B family with sequence similarity 134, member B 0.150381
LEUTX leucine twenty homeobox 0.149881
DIAPH3 diaphanous-related formin 3 0.105515
MACF1 microtubule-actin crosslinking factor 1 0.104892
DNTTIP1 deoxynucleotidyltransferase, terminal, interacting protein 1 0.10006
PSMD1 proteasome (prosome, macropain) 26S subunit, non-ATPase, 1 0.092901
CCSER1 coiled-coil serine-rich protein 1 0.073696
RAPSN receptor-associated protein of the synapse 0.06678
COL27A1 collagen, type XXVII, alpha 1 0.06007
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 0.05994