Hippocampus Gene Set

Dataset dbGAP Gene-Trait Associations
Category disease or phenotype associations
Type trait
Description A curved elongated ridge that extends over the floor of the descending horn of each lateral ventricle of the brain and consists of gray matter covered on the ventricular surface with white matter;nThe hippocampus is a part of the temporal lobe, which has a well established role in learning, memory and emotion.|A part of the brain consisting of a three layered cortex located in the forebrain bordering the medial surface of the lateral ventricle. The term hippocampus is often used synonymously with hippocampal formation which consists of the hippocampus proper or Cornu Ammonis, the dentate gyrus and the subiculum. (Experimental Factor Ontology, EFO_0000530)
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Genes

29 genes associated with the trait Hippocampus in GWAS and other genetic association datasets from the dbGAP Gene-Trait Associations dataset.

Symbol Name Standardized Value
HMGA2 high mobility group AT-hook 2 1.07287
MSRB3 methionine sulfoxide reductase B3 0.965948
GRM3 glutamate receptor, metabotropic 3 0.720988
ASTN2 astrotactin 2 0.64828
IPO9 importin 9 0.642401
EFNA5 ephrin-A5 0.609816
DTHD1 death domain containing 1 0.598309
DPP4 dipeptidyl-peptidase 4 0.585749
RUFY3 RUN and FYVE domain containing 3 0.579898
PRUNE2 prune homolog 2 (Drosophila) 0.527821
ZBP1 Z-DNA binding protein 1 0.443956
MROH8 maestro heat-like repeat family member 8 0.443956
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.406869
CHRM5 cholinergic receptor, muscarinic 5 0.381724
AVEN apoptosis, caspase activation inhibitor 0.381724
PRDM5 PR domain containing 5 0.38036
PRAMEF17 PRAME family member 17 0.369017
PRAMEF16 PRAME family member 16 0.369017
SCN8A sodium channel, voltage gated, type VIII alpha subunit 0.339168
RPN2 ribophorin II 0.33862
ARSB arylsulfatase B 0.323533
IPMK inositol polyphosphate multikinase 0.308728
MAL2 mal, T-cell differentiation protein 2 (gene/pseudogene) 0.29992
HLCS holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase) 0.276559
ZNF717 zinc finger protein 717 0.234296
CDH10 cadherin 10, type 2 (T2-cadherin) 0.226013
CDH13 cadherin 13 0.102002
OR6X1 olfactory receptor, family 6, subfamily X, member 1 0.065651
SCFD1 sec1 family domain containing 1 0.057776