Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-A460-01A-21R-A24Z-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Head and Neck squamous cell carcinoma_HNSC (The Cancer Genome Atlas)
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Genes

429 genes with high or low expression in Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-A460-01A-21R-A24Z-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
AACSP1 acetoacetyl-CoA synthetase pseudogene 1
ABCA3 ATP-binding cassette, sub-family A (ABC1), member 3
ABCC13 ATP-binding cassette, sub-family C (CFTR/MRP), member 13, pseudogene
ABRACL ABRA C-terminal like
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2
ACOX1 acyl-CoA oxidase 1, palmitoyl
ADAM8 ADAM metallopeptidase domain 8
ADD1 adducin 1 (alpha)
AFAP1 actin filament associated protein 1
AGFG1 ArfGAP with FG repeats 1
AGPAT3 1-acylglycerol-3-phosphate O-acyltransferase 3
AHCYL1 adenosylhomocysteinase-like 1
AKT1S1 AKT1 substrate 1 (proline-rich)
ALDH1L1 aldehyde dehydrogenase 1 family, member L1
ALDH2 aldehyde dehydrogenase 2 family (mitochondrial)
ANKLE2 ankyrin repeat and LEM domain containing 2
ANO4 anoctamin 4
APOC1P1 apolipoprotein C-I pseudogene 1
ARHGAP26 Rho GTPase activating protein 26
ARL14EP ADP-ribosylation factor-like 14 effector protein
ARL3 ADP-ribosylation factor-like 3
ARL4C ADP-ribosylation factor-like 4C
ATF7IP2 activating transcription factor 7 interacting protein 2
ATG4D autophagy related 4D, cysteine peptidase
ATL2 atlastin GTPase 2
ATN1 atrophin 1
ATP5SL ATP5S-like
BACE2 beta-site APP-cleaving enzyme 2
BBS5 Bardet-Biedl syndrome 5
BCAT2 branched chain amino-acid transaminase 2, mitochondrial
BCL2L11 BCL2-like 11 (apoptosis facilitator)
BID BH3 interacting domain death agonist
BIRC3 baculoviral IAP repeat containing 3
BLOC1S3 biogenesis of lysosomal organelles complex-1, subunit 3
BTN2A1 butyrophilin, subfamily 2, member A1
BTN2A2 butyrophilin, subfamily 2, member A2
C17ORF70 chromosome 17 open reading frame 70
C1QTNF1 C1q and tumor necrosis factor related protein 1
C2CD2 C2 calcium-dependent domain containing 2
C6ORF222 chromosome 6 open reading frame 222
C7ORF49 chromosome 7 open reading frame 49
C7ORF69 chromosome 7 open reading frame 69
C9ORF57 chromosome 9 open reading frame 57
CAMK1G calcium/calmodulin-dependent protein kinase IG
CCDC150 coiled-coil domain containing 150
CCDC34 coiled-coil domain containing 34
CCDC97 coiled-coil domain containing 97
CCL20 chemokine (C-C motif) ligand 20
CCNF cyclin F
CCNJL cyclin J-like
CD200 CD200 molecule
CD83 CD83 molecule
CDC42EP3 CDC42 effector protein (Rho GTPase binding) 3
CDC42EP4 CDC42 effector protein (Rho GTPase binding) 4
CDC42EP5 CDC42 effector protein (Rho GTPase binding) 5
CDH19 cadherin 19, type 2
CDK18 cyclin-dependent kinase 18
CENPC centromere protein C
CENPJ centromere protein J
CEP135 centrosomal protein 135kDa
CFLAR CASP8 and FADD-like apoptosis regulator
CHRFAM7A CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion
CHRNA7 cholinergic receptor, nicotinic, alpha 7 (neuronal)
CHRNB3 cholinergic receptor, nicotinic, beta 3 (neuronal)
CLASP1 cytoplasmic linker associated protein 1
CLDN1 claudin 1
CLDN16 claudin 16
CLIC2 chloride intracellular channel 2
CLPTM1 cleft lip and palate associated transmembrane protein 1
CLUHP3 clustered mitochondria (cluA/CLU1) homolog pseudogene 3
CNN3 calponin 3, acidic
CNPY1 canopy FGF signaling regulator 1
COG7 component of oligomeric golgi complex 7
COL23A1 collagen, type XXIII, alpha 1
COL6A4P2 collagen, type VI, alpha 4 pseudogene 2
COPS7B COP9 signalosome subunit 7B
COX18 COX18 cytochrome c oxidase assembly factor
CROT carnitine O-octanoyltransferase
CSF1 colony stimulating factor 1 (macrophage)
CSF2RA colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)
CSF2RB colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage)
CSNK1D casein kinase 1, delta
CTSE cathepsin E
CUZD1 CUB and zona pellucida-like domains 1
CXCR4 chemokine (C-X-C motif) receptor 4
CXORF40B chromosome X open reading frame 40B
CXORF65 chromosome X open reading frame 65
CYP27A1 cytochrome P450, family 27, subfamily A, polypeptide 1
CYP2E1 cytochrome P450, family 2, subfamily E, polypeptide 1
CYP4A22 cytochrome P450, family 4, subfamily A, polypeptide 22
CYP4X1 cytochrome P450, family 4, subfamily X, polypeptide 1
CYP4Z1 cytochrome P450, family 4, subfamily Z, polypeptide 1
CYTH1 cytohesin 1
DAGLA diacylglycerol lipase, alpha
DAZAP2 DAZ associated protein 2
DBP D site of albumin promoter (albumin D-box) binding protein
DDA1 DET1 and DDB1 associated 1
DDAH1 dimethylarginine dimethylaminohydrolase 1
DGKQ diacylglycerol kinase, theta 110kDa
DKFZP586I1420 uncharacterized protein DKFZp586I1420
DNAJB6 DnaJ (Hsp40) homolog, subfamily B, member 6
DNAJC24 DnaJ (Hsp40) homolog, subfamily C, member 24
DSCR3 Down syndrome critical region 3
DXO decapping exoribonuclease
EDARADD EDAR-associated death domain
EML4 echinoderm microtubule associated protein like 4
EN2 engrailed homeobox 2
ENGASE endo-beta-N-acetylglucosaminidase
EPYC epiphycan
ERO1LB ERO1-like beta (S. cerevisiae)
ESR1 estrogen receptor 1
FAM117A family with sequence similarity 117, member A
FAM169B family with sequence similarity 169, member B
FAM170A family with sequence similarity 170, member A
FAM189A2 family with sequence similarity 189, member A2
FAM213B family with sequence similarity 213, member B
FAM53B family with sequence similarity 53, member B
FANCC Fanconi anemia, complementation group C
FBF1 Fas (TNFRSF6) binding factor 1
FBXL14 F-box and leucine-rich repeat protein 14
FDCSP follicular dendritic cell secreted protein
FGFR3 fibroblast growth factor receptor 3
FMR1-AS1 FMR1 antisense RNA 1
FN3KRP fructosamine 3 kinase related protein
FOXC1 forkhead box C1
FOXK2 forkhead box K2
FOXP3 forkhead box P3
FRMD4A FERM domain containing 4A
GABRP gamma-aminobutyric acid (GABA) A receptor, pi
GADD45A growth arrest and DNA-damage-inducible, alpha
GAK cyclin G associated kinase
GALNT11 polypeptide N-acetylgalactosaminyltransferase 11
GATA6 GATA binding protein 6
GCNT7 glucosaminyl (N-acetyl) transferase family member 7
GCSAM germinal center-associated, signaling and motility
GFI1B growth factor independent 1B transcription repressor
GGA2 golgi-associated, gamma adaptin ear containing, ARF binding protein 2
GHRLOS ghrelin opposite strand/antisense RNA
GOLGA8F golgin A8 family, member F
GORAB golgin, RAB6-interacting
GOSR1 golgi SNAP receptor complex member 1
GPATCH1 G patch domain containing 1
GPR137 G protein-coupled receptor 137
GRB2 growth factor receptor-bound protein 2
GRIK1-AS1 GRIK1 antisense RNA 1
GRSF1 G-rich RNA sequence binding factor 1
GSK3A glycogen synthase kinase 3 alpha
GTF2F2 general transcription factor IIF, polypeptide 2, 30kDa
GTF2H1 general transcription factor IIH, polypeptide 1, 62kDa
GYPB glycophorin B (MNS blood group)
HCN4 hyperpolarization activated cyclic nucleotide gated potassium channel 4
HDAC7 histone deacetylase 7
HERC2P2 hect domain and RLD 2 pseudogene 2
HIST1H1A histone cluster 1, H1a
HIVEP1 human immunodeficiency virus type I enhancer binding protein 1
HMSD histocompatibility (minor) serpin domain containing
HNRNPUL1 heterogeneous nuclear ribonucleoprotein U-like 1
HOXA4 homeobox A4
HOXB13 homeobox B13
HOXC6 homeobox C6
HOXC8 homeobox C8
HPS5 Hermansky-Pudlak syndrome 5
HSD17B7P2 hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2
HSPA1A heat shock 70kDa protein 1A
HSPA6 heat shock 70kDa protein 6 (HSP70B')
HSPA7 heat shock 70kDa protein 7 (HSP70B)
HYAL4 hyaluronoglucosaminidase 4
ICAM1 intercellular adhesion molecule 1
ID2B inhibitor of DNA binding 2B, dominant negative helix-loop-helix protein (pseudogene)
IFNAR2 interferon (alpha, beta and omega) receptor 2
IFNGR1 interferon gamma receptor 1
IFNGR2 interferon gamma receptor 2 (interferon gamma transducer 1)
IKBKE inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon
IL1R1 interleukin 1 receptor, type I
IL27RA interleukin 27 receptor, alpha
IL2RG interleukin 2 receptor, gamma
IL4I1 interleukin 4 induced 1
INPP1 inositol polyphosphate-1-phosphatase
IQCE IQ motif containing E
IRAK3 interleukin-1 receptor-associated kinase 3
KBTBD2 kelch repeat and BTB (POZ) domain containing 2
KCNC4 potassium channel, voltage gated Shaw related subfamily C, member 4
KCNJ5 potassium channel, inwardly rectifying subfamily J, member 5
KCNJ6 potassium channel, inwardly rectifying subfamily J, member 6
KCNK4 potassium channel, two pore domain subfamily K, member 4
KCNU1 potassium channel, subfamily U, member 1
KCTD13 potassium channel tetramerization domain containing 13
KIAA0226L KIAA0226-like
KLHL5 kelch-like family member 5
KREMEN1 kringle containing transmembrane protein 1
KRT72 keratin 72, type II
KRT77 keratin 77, type II
LBH limb bud and heart development
LENG8 leukocyte receptor cluster (LRC) member 8
LGR4 leucine-rich repeat containing G protein-coupled receptor 4
LHX2 LIM homeobox 2
LINC00240 long intergenic non-protein coding RNA 240
LITAF lipopolysaccharide-induced TNF factor
LMO2 LIM domain only 2 (rhombotin-like 1)
LMO4 LIM domain only 4
LOC100129550 uncharacterized LOC100129550
LOC115110 uncharacterized LOC115110
LOC400043 uncharacterized LOC400043
LOC441666 zinc finger protein 91 pseudogene
LRFN5 leucine rich repeat and fibronectin type III domain containing 5
LRRC1 leucine rich repeat containing 1
LRRC37A3 leucine rich repeat containing 37, member A3
LRRC8B leucine rich repeat containing 8 family, member B
LY6G5B lymphocyte antigen 6 complex, locus G5B
MAGEA9B melanoma antigen family A9B
MAN2B2 mannosidase, alpha, class 2B, member 2
MAP3K13 mitogen-activated protein kinase kinase kinase 13
MAPKAPK2 mitogen-activated protein kinase-activated protein kinase 2
MC4R melanocortin 4 receptor
MECOM MDS1 and EVI1 complex locus
MED25 mediator complex subunit 25
MED26 mediator complex subunit 26
MGAT3 mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase
MICALL2 MICAL-like 2
MMP19 matrix metallopeptidase 19
MMP7 matrix metallopeptidase 7
MPPED2 metallophosphoesterase domain containing 2
MRAP2 melanocortin 2 receptor accessory protein 2
MS4A14 membrane-spanning 4-domains, subfamily A, member 14
MYO6 myosin VI
NAA60 N(alpha)-acetyltransferase 60, NatF catalytic subunit
NAV2 neuron navigator 2
NCAM2 neural cell adhesion molecule 2
NCEH1 neutral cholesterol ester hydrolase 1
NCF4 neutrophil cytosolic factor 4, 40kDa
NCK1 NCK adaptor protein 1
NECAP2 NECAP endocytosis associated 2
NEDD1 neural precursor cell expressed, developmentally down-regulated 1
NEURL3 neuralized E3 ubiquitin protein ligase 3
NFE2L3 nuclear factor, erythroid 2-like 3
NFKB2 nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)
NFKBID nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, delta
NFKBIE nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon
NGFR nerve growth factor receptor
NINJ1 ninjurin 1
NKX3-2 NK3 homeobox 2
NR1D1 nuclear receptor subfamily 1, group D, member 1
NR1H2 nuclear receptor subfamily 1, group H, member 2
NUCB1 nucleobindin 1
NUDT19 nudix (nucleoside diphosphate linked moiety X)-type motif 19
NUP62 nucleoporin 62kDa
NXPH2 neurexophilin 2
OGFRL1 opioid growth factor receptor-like 1
OR10K1 olfactory receptor, family 10, subfamily K, member 1
OR1L3 olfactory receptor, family 1, subfamily L, member 3
OR2AE1 olfactory receptor, family 2, subfamily AE, member 1
OR51G1 olfactory receptor, family 51, subfamily G, member 1 (gene/pseudogene)
OR52I2 olfactory receptor, family 52, subfamily I, member 2
OR52N4 olfactory receptor, family 52, subfamily N, member 4 (gene/pseudogene)
OSBPL7 oxysterol binding protein-like 7
OTULIN OTU deubiquitinase with linear linkage specificity
PAK4 p21 protein (Cdc42/Rac)-activated kinase 4
PAMR1 peptidase domain containing associated with muscle regeneration 1
PAOX polyamine oxidase (exo-N4-amino)
PAQR8 progestin and adipoQ receptor family member VIII
PASK PAS domain containing serine/threonine kinase
PBX4 pre-B-cell leukemia homeobox 4
PCGF3 polycomb group ring finger 3
PDE6D phosphodiesterase 6D, cGMP-specific, rod, delta
PDXK pyridoxal (pyridoxine, vitamin B6) kinase
PEF1 penta-EF-hand domain containing 1
PER3 period circadian clock 3
PGS1 phosphatidylglycerophosphate synthase 1
PHF10 PHD finger protein 10
PIAS3 protein inhibitor of activated STAT, 3
PIK3CB phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta
PIKFYVE phosphoinositide kinase, FYVE finger containing
PISD phosphatidylserine decarboxylase
PKDCC protein kinase domain containing, cytoplasmic
PLAC4 placenta-specific 4
PLEK pleckstrin
PNISR PNN-interacting serine/arginine-rich protein
POLD3 polymerase (DNA-directed), delta 3, accessory subunit
PPIEL peptidylprolyl isomerase E-like pseudogene
PPP1R12C protein phosphatase 1, regulatory subunit 12C
PPP1R15A protein phosphatase 1, regulatory subunit 15A
PPP5C protein phosphatase 5, catalytic subunit
PPP6R1 protein phosphatase 6, regulatory subunit 1
PRICKLE4 prickle homolog 4 (Drosophila)
PRMT1 protein arginine methyltransferase 1
PRR12 proline rich 12
PRR5L proline rich 5 like
PSMA1 proteasome (prosome, macropain) subunit, alpha type, 1
PSORS1C3 psoriasis susceptibility 1 candidate 3 (non-protein coding)
PTP4A2 protein tyrosine phosphatase type IVA, member 2
PTPRQ protein tyrosine phosphatase, receptor type, Q
PVRL2 poliovirus receptor-related 2 (herpesvirus entry mediator B)
QDPR quinoid dihydropteridine reductase
QRICH2 glutamine rich 2
RAB26 RAB26, member RAS oncogene family
RAB28 RAB28, member RAS oncogene family
RAB36 RAB36, member RAS oncogene family
RAB6C RAB6C, member RAS oncogene family
RAB9A RAB9A, member RAS oncogene family
RAET1K retinoic acid early transcript 1K pseudogene
RANBP17 RAN binding protein 17
RASD2 RASD family, member 2
RASSF6 Ras association (RalGDS/AF-6) domain family member 6
RCBTB2 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
RELB v-rel avian reticuloendotheliosis viral oncogene homolog B
REPIN1 replication initiator 1
RGS9 regulator of G-protein signaling 9
RHBDF1 rhomboid 5 homolog 1 (Drosophila)
RHBDF2 rhomboid 5 homolog 2 (Drosophila)
RHBDL2 rhomboid, veinlet-like 2 (Drosophila)
RHOT1 ras homolog family member T1
RILPL2 Rab interacting lysosomal protein-like 2
RND1 Rho family GTPase 1
RNF19A ring finger protein 19A, RBR E3 ubiquitin protein ligase
RNF19B ring finger protein 19B
RNF207 ring finger protein 207
RNF4 ring finger protein 4
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila)
RRAS related RAS viral (r-ras) oncogene homolog
RRN3P2 RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 2
RTCB RNA 2',3'-cyclic phosphate and 5'-OH ligase
SAMD10 sterile alpha motif domain containing 10
SDK2 sidekick cell adhesion molecule 2
SEC31B SEC31 homolog B (S. cerevisiae)
SEC61A2 Sec61 alpha 2 subunit (S. cerevisiae)
SEMA3D sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D
SEPT2 septin 2
SERPINA4 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 4
SERPINB12 serpin peptidase inhibitor, clade B (ovalbumin), member 12
SERTAD3 SERTA domain containing 3
SH2B1 SH2B adaptor protein 1
SH2B3 SH2B adaptor protein 3
SH3TC1 SH3 domain and tetratricopeptide repeats 1
SKINTL Skint-like, pseudogene
SLC37A1 solute carrier family 37 (glucose-6-phosphate transporter), member 1
SLC39A11 solute carrier family 39, member 11
SLC5A12 solute carrier family 5 (sodium/monocarboxylate cotransporter), member 12
SLC5A6 solute carrier family 5 (sodium/multivitamin and iodide cotransporter), member 6
SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
SMG9 SMG9 nonsense mediated mRNA decay factor
SNHG12 small nucleolar RNA host gene 12
SNORA21 small nucleolar RNA, H/ACA box 21
SOCS1 suppressor of cytokine signaling 1
SOCS2 suppressor of cytokine signaling 2
SOX8 SRY (sex determining region Y)-box 8
SPIB Spi-B transcription factor (Spi-1/PU.1 related)
SPINK14 serine peptidase inhibitor, Kazal type 14 (putative)
SPSB1 splA/ryanodine receptor domain and SOCS box containing 1
SRSF4 serine/arginine-rich splicing factor 4
SSBP3 single stranded DNA binding protein 3
STARD7 StAR-related lipid transfer (START) domain containing 7
STRN4 striatin, calmodulin binding protein 4
STXBP6 syntaxin binding protein 6 (amisyn)
SUSD4 sushi domain containing 4
SYNGR2 synaptogyrin 2
TANK TRAF family member-associated NFKB activator
TAS2R5 taste receptor, type 2, member 5
TBC1D17 TBC1 domain family, member 17
TBC1D8 TBC1 domain family, member 8 (with GRAM domain)
TCF7 transcription factor 7 (T-cell specific, HMG-box)
TCF7L1 transcription factor 7-like 1 (T-cell specific, HMG-box)
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)
TINAGL1 tubulointerstitial nephritis antigen-like 1
TLR1 toll-like receptor 1
TLR5 toll-like receptor 5
TLR6 toll-like receptor 6
TMC6 transmembrane channel-like 6
TMC8 transmembrane channel-like 8
TMEM128 transmembrane protein 128
TMEM133 transmembrane protein 133
TMEM156 transmembrane protein 156
TMEM167B transmembrane protein 167B
TMEM173 transmembrane protein 173
TMEM30A transmembrane protein 30A
TMEM57 transmembrane protein 57
TMEM86B transmembrane protein 86B
TMX3 thioredoxin-related transmembrane protein 3
TNFAIP2 tumor necrosis factor, alpha-induced protein 2
TNFRSF9 tumor necrosis factor receptor superfamily, member 9
TNFSF15 tumor necrosis factor (ligand) superfamily, member 15
TNIP1 TNFAIP3 interacting protein 1
TNIP2 TNFAIP3 interacting protein 2
TPI1P3 triosephosphate isomerase 1 pseudogene 3
TRAPPC10 trafficking protein particle complex 10
TRIM28 tripartite motif containing 28
TRIM47 tripartite motif containing 47
TRIM8 tripartite motif containing 8
TRPM4 transient receptor potential cation channel, subfamily M, member 4
UBE2J1 ubiquitin-conjugating enzyme E2, J1
UBE2M ubiquitin-conjugating enzyme E2M
UBE2MP1 ubiquitin-conjugating enzyme E2M pseudogene 1
UBFD1 ubiquitin family domain containing 1
USP31 ubiquitin specific peptidase 31
USP36 ubiquitin specific peptidase 36
USPL1 ubiquitin specific peptidase like 1
UXS1 UDP-glucuronate decarboxylase 1
VASH2 vasohibin 2
VCAM1 vascular cell adhesion molecule 1
VPS37C vacuolar protein sorting 37 homolog C (S. cerevisiae)
VRK2 vaccinia related kinase 2
WBP4 WW domain binding protein 4
WDR45B WD repeat domain 45B
WDR60 WD repeat domain 60
WDR91 WD repeat domain 91
WDR92 WD repeat domain 92
WNK2 WNK lysine deficient protein kinase 2
WNT5B wingless-type MMTV integration site family, member 5B
XRCC1 X-ray repair complementing defective repair in Chinese hamster cells 1
ZBTB45 zinc finger and BTB domain containing 45
ZBTB49 zinc finger and BTB domain containing 49
ZFAND2A zinc finger, AN1-type domain 2A
ZFC3H1 zinc finger, C3H1-type containing
ZFYVE27 zinc finger, FYVE domain containing 27
ZMIZ2 zinc finger, MIZ-type containing 2
ZNF112 zinc finger protein 112
ZNF264 zinc finger protein 264
ZNF267 zinc finger protein 267
ZNF324 zinc finger protein 324
ZNF324B zinc finger protein 324B
ZNF518B zinc finger protein 518B
ZNF576 zinc finger protein 576
ZNF577 zinc finger protein 577
ZNF584 zinc finger protein 584
ZNF805 zinc finger protein 805
ZSCAN22 zinc finger and SCAN domain containing 22

low expression

Symbol Name
BBS7 Bardet-Biedl syndrome 7
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme
SEC31A SEC31 homolog A (S. cerevisiae)
TANGO6 transport and golgi organization 6 homolog (Drosophila)