Head and Neck squamous cell carcinoma_HNSC_TCGA-CQ-A4CH-01A-11R-A266-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Head and Neck squamous cell carcinoma_HNSC (The Cancer Genome Atlas)
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Genes

359 genes with high or low expression in Head and Neck squamous cell carcinoma_HNSC_TCGA-CQ-A4CH-01A-11R-A266-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ACAD11 acyl-CoA dehydrogenase family, member 11
ACCS 1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)
ACTR2 ARP2 actin-related protein 2 homolog (yeast)
ADGRE4P adhesion G protein-coupled receptor E4, pseudogene
AEN apoptosis enhancing nuclease
AGAP4 ArfGAP with GTPase domain, ankyrin repeat and PH domain 4
AGAP6 ArfGAP with GTPase domain, ankyrin repeat and PH domain 6
AHSA2 AHA1, activator of heat shock 90kDa protein ATPase homolog 2 (yeast)
AIMP2 aminoacyl tRNA synthetase complex-interacting multifunctional protein 2
AJAP1 adherens junctions associated protein 1
AKAP11 A kinase (PRKA) anchor protein 11
ALDH1A3 aldehyde dehydrogenase 1 family, member A3
ALKBH8 alkB, alkylation repair homolog 8 (E. coli)
ANKRD26 ankyrin repeat domain 26
ANKRD49 ankyrin repeat domain 49
ANXA8L1 annexin A8-like 1
AOX2P aldehyde oxidase 2 pseudogene
ARFGEF1 ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited)
ARGLU1 arginine and glutamate rich 1
ARHGAP21 Rho GTPase activating protein 21
ARHGEF25 Rho guanine nucleotide exchange factor (GEF) 25
ARID3B AT rich interactive domain 3B (BRIGHT-like)
ARVCF armadillo repeat gene deleted in velocardiofacial syndrome
ASAH2 N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2
ASMTL-AS1 ASMTL antisense RNA 1
ATL2 atlastin GTPase 2
ATM ATM serine/threonine kinase
AXIN1 axin 1
B3GNT2 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2
BEST1 bestrophin 1
BIVM basic, immunoglobulin-like variable motif containing
BMP6 bone morphogenetic protein 6
BMS1P5 BMS1 ribosome biogenesis factor pseudogene 5
BTNL8 butyrophilin-like 8
C10ORF55 chromosome 10 open reading frame 55
C10ORF88 chromosome 10 open reading frame 88
C16ORF52 chromosome 16 open reading frame 52
C1ORF100 chromosome 1 open reading frame 100
C22ORF42 chromosome 22 open reading frame 42
C2ORF16 chromosome 2 open reading frame 16
C3ORF52 chromosome 3 open reading frame 52
C6ORF141 chromosome 6 open reading frame 141
C6ORF62 chromosome 6 open reading frame 62
C7ORF31 chromosome 7 open reading frame 31
CACNB3 calcium channel, voltage-dependent, beta 3 subunit
CAMK1G calcium/calmodulin-dependent protein kinase IG
CANT1 calcium activated nucleotidase 1
CARD11 caspase recruitment domain family, member 11
CBL Cbl proto-oncogene, E3 ubiquitin protein ligase
CCDC102B coiled-coil domain containing 102B
CCDC126 coiled-coil domain containing 126
CCDC14 coiled-coil domain containing 14
CCDC142 coiled-coil domain containing 142
CCDC144A coiled-coil domain containing 144A
CCDC15 coiled-coil domain containing 15
CCDC82 coiled-coil domain containing 82
CCDC87 coiled-coil domain containing 87
CCDC93 coiled-coil domain containing 93
CCL3L1 chemokine (C-C motif) ligand 3-like 1
CCNJ cyclin J
CCT6A chaperonin containing TCP1, subunit 6A (zeta 1)
CD2AP CD2-associated protein
CDK8 cyclin-dependent kinase 8
CDYL chromodomain protein, Y-like
CEACAM3 carcinoembryonic antigen-related cell adhesion molecule 3
CELSR3 cadherin, EGF LAG seven-pass G-type receptor 3
CEP41 centrosomal protein 41kDa
CGB7 chorionic gonadotropin, beta polypeptide 7
CHCHD2 coiled-coil-helix-coiled-coil-helix domain containing 2
CHD7 chromodomain helicase DNA binding protein 7
CHUK conserved helix-loop-helix ubiquitous kinase
CLCF1 cardiotrophin-like cytokine factor 1
CLUHP3 clustered mitochondria (cluA/CLU1) homolog pseudogene 3
CMTR2 cap methyltransferase 2
COG3 component of oligomeric golgi complex 3
COG6 component of oligomeric golgi complex 6
CRAMP1L Crm, cramped-like (Drosophila)
CREBZF CREB/ATF bZIP transcription factor
CRKL v-crk avian sarcoma virus CT10 oncogene homolog-like
CRYL1 crystallin, lambda 1
CRYM-AS1 CRYM antisense RNA 1
CRYZ crystallin, zeta (quinone reductase)
CSF3R colony stimulating factor 3 receptor (granulocyte)
CSGALNACT2 chondroitin sulfate N-acetylgalactosaminyltransferase 2
CSPP1 centrosome and spindle pole associated protein 1
CUZD1 CUB and zona pellucida-like domains 1
CWH43 cell wall biogenesis 43 C-terminal homolog (S. cerevisiae)
CYP27B1 cytochrome P450, family 27, subfamily B, polypeptide 1
DAXX death-domain associated protein
DDX18 DEAD (Asp-Glu-Ala-Asp) box polypeptide 18
DDX50 DEAD (Asp-Glu-Ala-Asp) box polypeptide 50
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3
DPAGT1 dolichyl-phosphate (UDP-N-acetylglucosamine) N-acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)
DPY19L2 dpy-19-like 2 (C. elegans)
DPY19L4 dpy-19-like 4 (C. elegans)
DZIP1 DAZ interacting zinc finger protein 1
E2F3 E2F transcription factor 3
EFNB2 ephrin-B2
EFTUD1 elongation factor Tu GTP binding domain containing 1
EGFR epidermal growth factor receptor
ENTHD2 ENTH domain containing 2
ERCC6 excision repair cross-complementation group 6
EVC2 Ellis van Creveld syndrome 2
FAM149B1 family with sequence similarity 149, member B1
FAM188A family with sequence similarity 188, member A
FAM21A family with sequence similarity 21, member A
FAM21C family with sequence similarity 21, member C
FAM76B family with sequence similarity 76, member B
FAM83B family with sequence similarity 83, member B
FDXACB1 ferredoxin-fold anticodon binding domain containing 1
FERMT1 fermitin family member 1
FEZ1 fasciculation and elongation protein zeta 1 (zygin I)
FKBP1B FK506 binding protein 1B, 12.6 kDa
FLRT2 fibronectin leucine rich transmembrane protein 2
FNDC3A fibronectin type III domain containing 3A
FOXN2 forkhead box N2
GABBR1 gamma-aminobutyric acid (GABA) B receptor, 1
GBAS glioblastoma amplified sequence
GHRLOS ghrelin opposite strand/antisense RNA
GLI3 GLI family zinc finger 3
GLIPR2 GLI pathogenesis-related 2
GNA12 guanine nucleotide binding protein (G protein) alpha 12
GOLGA6L5P golgin A6 family-like 5, pseudogene
GOSR2 golgi SNAP receptor complex member 2
GPALPP1 GPALPP motifs containing 1
GPATCH2L G patch domain containing 2-like
GPR78 G protein-coupled receptor 78
GRK4 G protein-coupled receptor kinase 4
GTPBP2 GTP binding protein 2
HAUS3 HAUS augmin-like complex, subunit 3
HCG18 HLA complex group 18 (non-protein coding)
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4
HFE hemochromatosis
HIRA histone cell cycle regulator
HMGA2 high mobility group AT-hook 2
HNRNPF heterogeneous nuclear ribonucleoprotein F
HOXA1 homeobox A1
IFT88 intraflagellar transport 88
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3
IL1RL2 interleukin 1 receptor-like 2
INADL InaD-like (Drosophila)
INSL5 insulin-like 5
INTS8 integrator complex subunit 8
KANK4 KN motif and ankyrin repeat domains 4
KBTBD2 kelch repeat and BTB (POZ) domain containing 2
KDM7A lysine (K)-specific demethylase 7A
KIAA1586 KIAA1586
KIAA1598
KIF3C kinesin family member 3C
KIN Kin17 DNA and RNA binding protein
KPNA7 karyopherin alpha 7 (importin alpha 8)
LANCL2 LanC lantibiotic synthetase component C-like 2 (bacterial)
LHX1 LIM homeobox 1
LINC00518 long intergenic non-protein coding RNA 518
LINC00696 long intergenic non-protein coding RNA 696
LLGL1 lethal giant larvae homolog 1 (Drosophila)
LNX2 ligand of numb-protein X 2
LOC284661 uncharacterized LOC284661
LOC644936 actin, beta pseudogene
LRCH1 leucine-rich repeats and calponin homology (CH) domain containing 1
LYPLA1 lysophospholipase I
MALT1 MALT1 paracaspase
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4
MAPK8 mitogen-activated protein kinase 8
MATN1 matrilin 1, cartilage matrix protein
MDFI MyoD family inhibitor
MDS2 myelodysplastic syndrome 2 translocation associated
MEG8 maternally expressed 8 (non-protein coding)
MESP2 mesoderm posterior basic helix-loop-helix transcription factor 2
METTL2B methyltransferase like 2B
MFSD9 major facilitator superfamily domain containing 9
MICAL1 microtubule associated monooxygenase, calponin and LIM domain containing 1
MICU2 mitochondrial calcium uptake 2
MLH3 mutL homolog 3
MMP9 matrix metallopeptidase 9
MMS19 MMS19 nucleotide excision repair homolog (S. cerevisiae)
MPP6 membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)
MRPL10 mitochondrial ribosomal protein L10
MRPS31 mitochondrial ribosomal protein S31
MSANTD2 Myb/SANT-like DNA-binding domain containing 2
MTMR6 myotubularin related protein 6
MTRF1 mitochondrial translational release factor 1
MTSS1 metastasis suppressor 1
MYSM1 Myb-like, SWIRM and MPN domains 1
N4BP2 NEDD4 binding protein 2
NAA16 N(alpha)-acetyltransferase 16, NatA auxiliary subunit
NABP1 nucleic acid binding protein 1
NBPF7 neuroblastoma breakpoint family, member 7
NEK3 NIMA-related kinase 3
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive
NFATC2IP nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein
NFYA nuclear transcription factor Y, alpha
NLK nemo-like kinase
NLRP10 NLR family, pyrin domain containing 10
NOC3L nucleolar complex associated 3 homolog (S. cerevisiae)
NOD1 nucleotide-binding oligomerization domain containing 1
NPAP1 nuclear pore associated protein 1
NTSR1 neurotensin receptor 1 (high affinity)
NUFIP1 nuclear fragile X mental retardation protein interacting protein 1
NUPL1 nucleoporin like 1
OGT O-linked N-acetylglucosamine (GlcNAc) transferase
OIT3 oncoprotein induced transcript 3
OR1J2 olfactory receptor, family 1, subfamily J, member 2
OR1Q1 olfactory receptor, family 1, subfamily Q, member 1
OR2AG2 olfactory receptor, family 2, subfamily AG, member 2
OR2T2 olfactory receptor, family 2, subfamily T, member 2
OR4F5 olfactory receptor, family 4, subfamily F, member 5
OR52M1 olfactory receptor, family 52, subfamily M, member 1
OSBPL3 oxysterol binding protein-like 3
OTUD6B OTU domain containing 6B
PACRGL PARK2 co-regulated-like
PAN3 PAN3 poly(A) specific ribonuclease subunit
PAPL iron/zinc purple acid phosphatase-like protein
PARG poly (ADP-ribose) glycohydrolase
PBX2 pre-B-cell leukemia homeobox 2
PCGF3 polycomb group ring finger 3
PCSK7 proprotein convertase subtilisin/kexin type 7
PDE6H phosphodiesterase 6H, cGMP-specific, cone, gamma
PDE7A phosphodiesterase 7A
PEX26 peroxisomal biogenesis factor 26
PFN4 profilin family, member 4
PGBD3 piggyBac transposable element derived 3
PHF14 PHD finger protein 14
PI15 peptidase inhibitor 15
PJA1 praja ring finger 1, E3 ubiquitin protein ligase
PLAU plasminogen activator, urokinase
PLEKHG3 pleckstrin homology domain containing, family G (with RhoGef domain) member 3
PNMA1 paraneoplastic Ma antigen 1
POLI polymerase (DNA directed) iota
POLM polymerase (DNA directed), mu
POLR3A polymerase (RNA) III (DNA directed) polypeptide A, 155kDa
POM121L10P POM121 transmembrane nucleoporin-like 10, pseudogene
POM121L9P POM121 transmembrane nucleoporin-like 9, pseudogene
POMT2 protein-O-mannosyltransferase 2
PPIL2 peptidylprolyl isomerase (cyclophilin)-like 2
PPM1F protein phosphatase, Mg2+/Mn2+ dependent, 1F
PPP1R11 protein phosphatase 1, regulatory (inhibitor) subunit 11
PPP1R21 protein phosphatase 1, regulatory subunit 21
PPP1R9B protein phosphatase 1, regulatory subunit 9B
PPP2R1B protein phosphatase 2, regulatory subunit A, beta
PPP4R1L protein phosphatase 4, regulatory subunit 1-like (pseudogene)
PRDM10 PR domain containing 10
PRKAA1 protein kinase, AMP-activated, alpha 1 catalytic subunit
PROSER1 proline and serine rich 1
PRPF4B pre-mRNA processing factor 4B
PSEN1 presenilin 1
PSPH phosphoserine phosphatase
PTGDR prostaglandin D2 receptor (DP)
PWRN1 Prader-Willi region non-protein coding RNA 1
RAB11FIP2 RAB11 family interacting protein 2 (class I)
RAI14 retinoic acid induced 14
RASA1 RAS p21 protein activator (GTPase activating protein) 1
RB1 retinoblastoma 1
RBM25 RNA binding motif protein 25
RBM41 RNA binding motif protein 41
REP15 RAB15 effector protein
RGL2 ral guanine nucleotide dissociation stimulator-like 2
RICTOR RPTOR independent companion of MTOR, complex 2
RNF216P1 ring finger protein 216 pseudogene 1
RNF219 ring finger protein 219
RNF4 ring finger protein 4
RNF6 ring finger protein (C3H2C3 type) 6
RP1L1 retinitis pigmentosa 1-like 1
RPL7L1 ribosomal protein L7-like 1
RRN3P3 RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 3
SAMD14 sterile alpha motif domain containing 14
SCRN1 secernin 1
SDCBP syndecan binding protein (syntenin)
SEC23IP SEC23 interacting protein
SEC61G Sec61 gamma subunit
SEMA7A semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)
SEPT14 septin 14
SEPT7 septin 7
SGMS1 sphingomyelin synthase 1
SH3PXD2A SH3 and PX domains 2A
SLC24A1 solute carrier family 24 (sodium/potassium/calcium exchanger), member 1
SLC25A16 solute carrier family 25 (mitochondrial carrier), member 16
SLC37A2 solute carrier family 37 (glucose-6-phosphate transporter), member 2
SLC37A3 solute carrier family 37, member 3
SNORA29 small nucleolar RNA, H/ACA box 29
SNORA8 small nucleolar RNA, H/ACA box 8
SNORD1C small nucleolar RNA, C/D box 1C
SNX11 sorting nexin 11
SNX14 sorting nexin 14
SNX19 sorting nexin 19
SOCS6 suppressor of cytokine signaling 6
SPG20 spastic paraplegia 20 (Troyer syndrome)
SPTBN5 spectrin, beta, non-erythrocytic 5
SRC SRC proto-oncogene, non-receptor tyrosine kinase
SS18L1 synovial sarcoma translocation gene on chromosome 18-like 1
SSUH2 ssu-2 homolog (C. elegans)
STK31 serine/threonine kinase 31
STRIP2 striatin interacting protein 2
STX3 syntaxin 3
SUDS3 suppressor of defective silencing 3 homolog (S. cerevisiae)
SUMF2 sulfatase modifying factor 2
SUPT20H suppressor of Ty 20 homolog (S. cerevisiae)
SUPT7L suppressor of Ty 7 (S. cerevisiae)-like
SYNGAP1 synaptic Ras GTPase activating protein 1
TAGLN3 transgelin 3
TANGO2 transport and golgi organization 2 homolog (Drosophila)
TAOK2 TAO kinase 2
TBC1D2B TBC1 domain family, member 2B
TBRG1 transforming growth factor beta regulator 1
TEX261 testis expressed 261
TGFA transforming growth factor, alpha
THAP10 THAP domain containing 10
THNSL2 threonine synthase-like 2 (S. cerevisiae)
TIAL1 TIA1 cytotoxic granule-associated RNA binding protein-like 1
TM4SF19 transmembrane 4 L six family member 19
TMC7 transmembrane channel-like 7
TMEFF1 transmembrane protein with EGF-like and two follistatin-like domains 1
TMEM170A transmembrane protein 170A
TMEM8A transmembrane protein 8A
TNRC6A trinucleotide repeat containing 6A
TOP3B topoisomerase (DNA) III beta
TPP2 tripeptidyl peptidase II
TRA2A transformer 2 alpha homolog (Drosophila)
TRIML1 tripartite motif family-like 1
TRIP4 thyroid hormone receptor interactor 4
TRMT61B tRNA methyltransferase 61B
TRNT1 tRNA nucleotidyl transferase, CCA-adding, 1
TSEN2 TSEN2 tRNA splicing endonuclease subunit
TSN translin
TTC14 tetratricopeptide repeat domain 14
TTPAL tocopherol (alpha) transfer protein-like
UFM1 ubiquitin-fold modifier 1
USP49 ubiquitin specific peptidase 49
USPL1 ubiquitin specific peptidase like 1
UVSSA UV-stimulated scaffold protein A
VEZT vezatin, adherens junctions transmembrane protein
VHL von Hippel-Lindau tumor suppressor, E3 ubiquitin protein ligase
VOPP1 vesicular, overexpressed in cancer, prosurvival protein 1
VPS36 vacuolar protein sorting 36 homolog (S. cerevisiae)
VTI1A vesicle transport through interaction with t-SNAREs 1A
WBP4 WW domain binding protein 4
WDR11 WD repeat domain 11
WNT7A wingless-type MMTV integration site family, member 7A
WSB1 WD repeat and SOCS box containing 1
XPO6 exportin 6
ZBED4 zinc finger, BED-type containing 4
ZBTB49 zinc finger and BTB domain containing 49
ZC3H13 zinc finger CCCH-type containing 13
ZDHHC6 zinc finger, DHHC-type containing 6
ZMYM5 zinc finger, MYM-type 5
ZNF2 zinc finger protein 2
ZNF202 zinc finger protein 202
ZNF212 zinc finger protein 212
ZNF254 zinc finger protein 254
ZNF451 zinc finger protein 451
ZNF485 zinc finger protein 485
ZNF514 zinc finger protein 514
ZNF572 zinc finger protein 572
ZNF713 zinc finger protein 713
ZNF720 zinc finger protein 720
ZSCAN20 zinc finger and SCAN domain containing 20
ZSCAN23 zinc finger and SCAN domain containing 23
ZSCAN29 zinc finger and SCAN domain containing 29