Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-A6V3-01A-12R-A34R-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Head and Neck squamous cell carcinoma_HNSC (The Cancer Genome Atlas)
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Genes

276 genes with high or low expression in Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-A6V3-01A-12R-A34R-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
AAED1 AhpC/TSA antioxidant enzyme domain containing 1
ACTR3BP2 ACTR3B pseudogene 2
ADAM3A ADAM metallopeptidase domain 3A (pseudogene)
ADGRG5 adhesion G protein-coupled receptor G5
ADK adenosine kinase
AKR7A3 aldo-keto reductase family 7, member A3 (aflatoxin aldehyde reductase)
ALG1L2 ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase-like 2
ALMS1P Alstrom syndrome 1 pseudogene
ANKDD1A ankyrin repeat and death domain containing 1A
ANKRD27 ankyrin repeat domain 27 (VPS9 domain)
ARHGAP27 Rho GTPase activating protein 27
ARHGEF35 Rho guanine nucleotide exchange factor (GEF) 35
ARL10 ADP-ribosylation factor-like 10
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1
ASIC1 acid sensing (proton gated) ion channel 1
AUH AU RNA binding protein/enoyl-CoA hydratase
AXDND1 axonemal dynein light chain domain containing 1
AXIN1 axin 1
BAG1 BCL2-associated athanogene
BARX1 BARX homeobox 1
BNC1 basonuclin 1
C16ORF78 chromosome 16 open reading frame 78
C17ORF47 chromosome 17 open reading frame 47
C5ORF24 chromosome 5 open reading frame 24
C5ORF56 chromosome 5 open reading frame 56
C9ORF91 chromosome 9 open reading frame 91
CA9 carbonic anhydrase IX
CACNB3 calcium channel, voltage-dependent, beta 3 subunit
CAMSAP1 calmodulin regulated spectrin-associated protein 1
CATSPER2P1 cation channel, sperm associated 2 pseudogene 1
CBFA2T3 core-binding factor, runt domain, alpha subunit 2; translocated to, 3
CCDC112 coiled-coil domain containing 112
CCDC152 coiled-coil domain containing 152
CCDC88C coiled-coil domain containing 88C
CCNA1 cyclin A1
CD248 CD248 molecule, endosialin
CDK5R1 cyclin-dependent kinase 5, regulatory subunit 1 (p35)
CDKL1 cyclin-dependent kinase-like 1 (CDC2-related kinase)
CDKL2 cyclin-dependent kinase-like 2 (CDC2-related kinase)
CDV3 CDV3 homolog (mouse)
CHRAC1 chromatin accessibility complex 1
CHRNA4 cholinergic receptor, nicotinic, alpha 4 (neuronal)
CMPK2 cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial
CORO2A coronin, actin binding protein, 2A
CPNE7 copine VII
CRYGA crystallin, gamma A
CSNK1A1L casein kinase 1, alpha 1-like
DBN1 drebrin 1
DBNDD1 dysbindin (dystrobrevin binding protein 1) domain containing 1
DCAF10 DDB1 and CUL4 associated factor 10
DCTN4 dynactin 4 (p62)
DDIT4 DNA-damage-inducible transcript 4
DEFB108B defensin, beta 108B
DNAJC21 DnaJ (Hsp40) homolog, subfamily C, member 21
DOC2B double C2-like domains, beta
DTX3L deltex 3 like, E3 ubiquitin ligase
DZIP1L DAZ interacting zinc finger protein 1-like
ESR2 estrogen receptor 2 (ER beta)
FAM117B family with sequence similarity 117, member B
FAM120A family with sequence similarity 120A
FAM170A family with sequence similarity 170, member A
FAM205A family with sequence similarity 205, member A
FAM205BP transmembrane protein C9orf144B pseudogene
FAM35A family with sequence similarity 35, member A
FAM35BP family with sequence similarity 35, member A pseudogene
FAM83H family with sequence similarity 83, member H
FKBP5 FK506 binding protein 5
FKSG29 FKSG29
FMNL2 formin-like 2
FOXH1 forkhead box H1
FSHB follicle stimulating hormone, beta polypeptide
FYTTD1 forty-two-three domain containing 1
GALK2 galactokinase 2
GLDN gliomedin
GPRIN1 G protein regulated inducer of neurite outgrowth 1
GRM5 glutamate receptor, metabotropic 5
GRXCR1 glutaredoxin, cysteine rich 1
GSDMB gasdermin B
GSDMC gasdermin C
GTF2H2C GTF2H2 family member C
H2AFB1 H2A histone family, member B1
HARS2 histidyl-tRNA synthetase 2, mitochondrial
HERC3 HECT and RLD domain containing E3 ubiquitin protein ligase 3
HES5 hes family bHLH transcription factor 5
HIATL2 hippocampus abundant transcript-like 2
HLA-G major histocompatibility complex, class I, G
HOXB4 homeobox B4
HOXD1 homeobox D1
HOXD4 homeobox D4
HPYR1 Helicobacter pylori responsive 1 (non-protein coding)
HSD17B4 hydroxysteroid (17-beta) dehydrogenase 4
IFIH1 interferon induced with helicase C domain 1
IFNA10 interferon, alpha 10
IFNA7 interferon, alpha 7
IFNA8 interferon, alpha 8
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2
IGSF1 immunoglobulin superfamily, member 1
IL12RB2 interleukin 12 receptor, beta 2
IL15 interleukin 15
INPP5E inositol polyphosphate-5-phosphatase, 72 kDa
IQCF6 IQ motif containing F6
IQCJ IQ motif containing J
KCNMB3 potassium channel subfamily M regulatory beta subunit 3
KDM1A lysine (K)-specific demethylase 1A
KHDC3L KH domain containing 3-like, subcortical maternal complex member
KIAA0226 KIAA0226
KIAA0368 KIAA0368
KIAA0922 KIAA0922
KIAA1875 KIAA1875
KIF17 kinesin family member 17
KLF14 Kruppel-like factor 14
KLHL2 kelch-like family member 2
LAMP3 lysosomal-associated membrane protein 3
LARP1 La ribonucleoprotein domain family, member 1
LILRP2 leukocyte immunoglobulin-like receptor pseudogene 2
LINC01599 long intergenic non-protein coding RNA 1599
LIPI lipase, member I
LIPJ lipase, family member J
LOC100130264 uncharacterized LOC100130264
LOC100134868 uncharacterized LOC100134868
LOC220729 succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene
LOC285074 anaphase promoting complex subunit 1 pseudogene
LOC646214 p21 protein (Cdc42/Rac)-activated kinase 2 pseudogene
LOX lysyl oxidase
LRRC3 leucine rich repeat containing 3
MAFB v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog B
MAGEA1 melanoma antigen family A1
MALT1 MALT1 paracaspase
MAN1A1 mannosidase, alpha, class 1A, member 1
MBD4 methyl-CpG binding domain protein 4
MCC mutated in colorectal cancers
MCCC2 methylcrotonoyl-CoA carboxylase 2 (beta)
MCHR1 melanin-concentrating hormone receptor 1
MCM3AP-AS1 MCM3AP antisense RNA 1
MCTS2P malignant T cell amplified sequence 2, pseudogene
MELK maternal embryonic leucine zipper kinase
MGAT4B mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme B
MINA MYC induced nuclear antigen
MIOX myo-inositol oxygenase
MSH3 mutS homolog 3
MT1IP metallothionein 1I, pseudogene
MTSS1 metastasis suppressor 1
MUC1 mucin 1, cell surface associated
NAA35 N(alpha)-acetyltransferase 35, NatC auxiliary subunit
NAT8 N-acetyltransferase 8 (GCN5-related, putative)
NELL2 NEL-like 2 (chicken)
NHEJ1 nonhomologous end-joining factor 1
NKX2-2 NK2 homeobox 2
NLN neurolysin (metallopeptidase M3 family)
NOBOX NOBOX oogenesis homeobox
NOP16 NOP16 nucleolar protein
NRBP2 nuclear receptor binding protein 2
NSD1 nuclear receptor binding SET domain protein 1
NSUN3 NOP2/Sun domain family, member 3
OR11H12 olfactory receptor, family 11, subfamily H, member 12
OR13H1 olfactory receptor, family 13, subfamily H, member 1
OR14I1 olfactory receptor, family 14, subfamily I, member 1
OR2A1 olfactory receptor, family 2, subfamily A, member 1
OR2A25 olfactory receptor, family 2, subfamily A, member 25
OR2L8 olfactory receptor, family 2, subfamily L, member 8 (gene/pseudogene)
OR2M5 olfactory receptor, family 2, subfamily M, member 5
OR2T11 olfactory receptor, family 2, subfamily T, member 11 (gene/pseudogene)
OR2T2 olfactory receptor, family 2, subfamily T, member 2
OR2W5 olfactory receptor, family 2, subfamily W, member 5 (gene/pseudogene)
OR4D2 olfactory receptor, family 4, subfamily D, member 2
OR4K17 olfactory receptor, family 4, subfamily K, member 17
OR4S1 olfactory receptor, family 4, subfamily S, member 1
OR51T1 olfactory receptor, family 51, subfamily T, member 1
OR56B1 olfactory receptor, family 56, subfamily B, member 1
OR5A1 olfactory receptor, family 5, subfamily A, member 1
OR8J1 olfactory receptor, family 8, subfamily J, member 1
OTOF otoferlin
OTUD4 OTU deubiquitinase 4
PAK2 p21 protein (Cdc42/Rac)-activated kinase 2
PARD6G par-6 family cell polarity regulator gamma
PARP14 poly (ADP-ribose) polymerase family, member 14
PARP6 poly (ADP-ribose) polymerase family, member 6
PARP9 poly (ADP-ribose) polymerase family, member 9
PBLD phenazine biosynthesis-like protein domain containing
PBX3 pre-B-cell leukemia homeobox 3
PCDHGA10 protocadherin gamma subfamily A, 10
PDHA2 pyruvate dehydrogenase (lipoamide) alpha 2
PER4 period circadian clock 3 pseudogene
PHLPP1 PH domain and leucine rich repeat protein phosphatase 1
PHYHD1 phytanoyl-CoA dioxygenase domain containing 1
PIGX phosphatidylinositol glycan anchor biosynthesis, class X
PIP5K1P1 phosphatidylinositol-4-phosphate 5-kinase, type I, pseudogene 1
PITPNM2 phosphatidylinositol transfer protein, membrane-associated 2
PKD2L2 polycystic kidney disease 2-like 2
PKN3 protein kinase N3
PLEKHA8P1 pleckstrin homology domain containing, family A member 8 pseudogene 1
PLEKHG4 pleckstrin homology domain containing, family G (with RhoGef domain) member 4
POLR3E polymerase (RNA) III (DNA directed) polypeptide E (80kD)
POLR3G polymerase (RNA) III (DNA directed) polypeptide G (32kD)
PRR16 proline rich 16
PRR20A proline rich 20A
PSG11 pregnancy specific beta-1-glycoprotein 11
PTPDC1 protein tyrosine phosphatase domain containing 1
PTPN20 protein tyrosine phosphatase, non-receptor type 20
PYDC2 pyrin domain containing 2
RABGAP1 RAB GTPase activating protein 1
RAC3 ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3)
RAD17 RAD17 homolog (S. pombe)
RBPMS2 RNA binding protein with multiple splicing 2
REXO1L1P REX1, RNA exonuclease 1 homolog (S. cerevisiae)-like 1, pseudogene
RLN3 relaxin 3
RLTPR RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing
RNASE9 ribonuclease, RNase A family, 9 (non-active)
RNF152 ring finger protein 152
RRN3P3 RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 3
RUVBL1 RuvB-like AAA ATPase 1
SCARNA15 small Cajal body-specific RNA 15
SCRIB scribbled planar cell polarity protein
SDC4P syndecan 4 pseudogene
SDCCAG3 serologically defined colon cancer antigen 3
SDHAP2 succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 2
SEPT4 septin 4
SETD1A SET domain containing 1A
SHB Src homology 2 domain containing adaptor protein B
SIK3 SIK family kinase 3
SLC25A52 solute carrier family 25, member 52
SLC28A3 solute carrier family 28 (concentrative nucleoside transporter), member 3
SLC35G2 solute carrier family 35, member G2
SLC7A5P1 solute carrier family 7 (amino acid transporter light chain, L system), member 5 pseudogene 1
SLCO1B7 solute carrier organic anion transporter family, member 1B7 (non-functional)
SMCO2 single-pass membrane protein with coiled-coil domains 2
SNAR-A3 small ILF3/NF90-associated RNA A3
SNHG4 small nucleolar RNA host gene 4
SNORA2A small nucleolar RNA, H/ACA box 2A
SNORA45A small nucleolar RNA, H/ACA box 45A
SNORD89 small nucleolar RNA, C/D box 89
SNX24 sorting nexin 24
SOD2 superoxide dismutase 2, mitochondrial
SOX18 SRY (sex determining region Y)-box 18
SP140 SP140 nuclear body protein
SRMS src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites
STAG3L2 stromal antigen 3-like 2 (pseudogene)
STAT5A signal transducer and activator of transcription 5A
TAAR1 trace amine associated receptor 1
TAS2R30 taste receptor, type 2, member 30
TBC1D3P2 TBC1 domain family, member 3 pseudogene 2
TBC1D9 TBC1 domain family, member 9 (with GRAM domain)
TDRD7 tudor domain containing 7
TEX43 testis expressed 43
TLE4 transducin-like enhancer of split 4
TLK2 tousled-like kinase 2
TLR2 toll-like receptor 2
TMCO6 transmembrane and coiled-coil domains 6
TMEM88B transmembrane protein 88B
TNC tenascin C
TNFAIP8 tumor necrosis factor, alpha-induced protein 8
TNK2 tyrosine kinase, non-receptor, 2
TRERF1 transcriptional regulating factor 1
TRIM14 tripartite motif containing 14
TRIM3 tripartite motif containing 3
TRIM78P tripartite motif containing 78, pseudogene
TRPC2 transient receptor potential cation channel, subfamily C, member 2, pseudogene
TTLL11 tubulin tyrosine ligase-like family member 11
TTTY10 testis-specific transcript, Y-linked 10 (non-protein coding)
TUBB1 tubulin, beta 1 class VI
UBTFL1 upstream binding transcription factor, RNA polymerase I-like 1
UIMC1 ubiquitin interaction motif containing 1
UNC5C unc-5 homolog C (C. elegans)
VN1R2 vomeronasal 1 receptor 2
ZBP1 Z-DNA binding protein 1
ZFAT-AS1 ZFAT antisense RNA 1
ZMYND19 zinc finger, MYND-type containing 19
ZNF148 zinc finger protein 148
ZNF474 zinc finger protein 474
ZNF512B zinc finger protein 512B
ZNF532 zinc finger protein 532
ZNF623 zinc finger protein 623
ZNF628 zinc finger protein 628
ZNF860 zinc finger protein 860
ZYG11A zyg-11 family member A, cell cycle regulator

low expression

Symbol Name
TROVE2 TROVE domain family, member 2