Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-A49C-01A-11R-A24H-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Head and Neck squamous cell carcinoma_HNSC (The Cancer Genome Atlas)
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Genes

370 genes with high or low expression in Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-A49C-01A-11R-A24H-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
AASS aminoadipate-semialdehyde synthase
ACAD9 acyl-CoA dehydrogenase family, member 9
ACAT2 acetyl-CoA acetyltransferase 2
ACBD7 acyl-CoA binding domain containing 7
ACER3 alkaline ceramidase 3
ACPP acid phosphatase, prostate
ACTL8 actin-like 8
ACVR2A activin A receptor, type IIA
ADAD2 adenosine deaminase domain containing 2
ADAMTS13 ADAM metallopeptidase with thrombospondin type 1 motif, 13
ADGRV1 adhesion G protein-coupled receptor V1
ADORA2A-AS1 ADORA2A antisense RNA 1
ALDH1L1 aldehyde dehydrogenase 1 family, member L1
ALG10B ALG10B, alpha-1,2-glucosyltransferase
ALG1L ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase-like
ALG1L2 ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase-like 2
ALG6 ALG6, alpha-1,3-glucosyltransferase
ANAPC2 anaphase promoting complex subunit 2
APBA1 amyloid beta (A4) precursor protein-binding, family A, member 1
ARHGAP4 Rho GTPase activating protein 4
ARHGEF19 Rho guanine nucleotide exchange factor (GEF) 19
ARSI arylsulfatase family, member I
ARSK arylsulfatase family, member K
ASB6 ankyrin repeat and SOCS box containing 6
ASF1B anti-silencing function 1B histone chaperone
ASTE1 asteroid homolog 1 (Drosophila)
ATG3 autophagy related 3
ATP6AP1L ATPase, H+ transporting, lysosomal accessory protein 1-like
ATXN7L2 ataxin 7-like 2
BCAS2 breast carcinoma amplified sequence 2
BCKDHA branched chain keto acid dehydrogenase E1, alpha polypeptide
BCO1 beta-carotene oxygenase 1
BDH2 3-hydroxybutyrate dehydrogenase, type 2
BPIFB4 BPI fold containing family B, member 4
C10ORF11 chromosome 10 open reading frame 11
C11ORF30 chromosome 11 open reading frame 30
C11ORF85 chromosome 11 open reading frame 85
C15ORF56 chromosome 15 open reading frame 56
C18ORF54 chromosome 18 open reading frame 54
C19ORF57 chromosome 19 open reading frame 57
C4ORF19 chromosome 4 open reading frame 19
C8B complement component 8, beta polypeptide
C9ORF84 chromosome 9 open reading frame 84
CACFD1 calcium channel flower domain containing 1
CASP6 caspase 6, apoptosis-related cysteine peptidase
CASP9 caspase 9, apoptosis-related cysteine peptidase
CC2D1A coiled-coil and C2 domain containing 1A
CCDC177 coiled-coil domain containing 177
CCDC64 coiled-coil domain containing 64
CDC25C cell division cycle 25C
CDC42BPG CDC42 binding protein kinase gamma (DMPK-like)
CDC7 cell division cycle 7
CDCA7L cell division cycle associated 7-like
CDKN2A cyclin-dependent kinase inhibitor 2A
CDKN2C cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)
CDKN2D cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)
CDRT15 CMT1A duplicated region transcript 15
CENPK centromere protein K
CENPN centromere protein N
CENPQ centromere protein Q
CENPU centromere protein U
CENPW centromere protein W
CEP19 centrosomal protein 19kDa
CFAP44 cilia and flagella associated protein 44
CFHR3 complement factor H-related 3
CHKB-CPT1B CHKB-CPT1B readthrough (NMD candidate)
CHST4 carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4
CHTF18 CTF18, chromosome transmission fidelity factor 18 homolog (S. cerevisiae)
CIZ1 CDKN1A interacting zinc finger protein 1
CLDND1 claudin domain containing 1
CLEC2A C-type lectin domain family 2, member A
CLEC2B C-type lectin domain family 2, member B
CLEC3A C-type lectin domain family 3, member A
CPOX coproporphyrinogen oxidase
CSAD cysteine sulfinic acid decarboxylase
CWF19L1 CWF19-like 1, cell cycle control (S. pombe)
CYP2C9 cytochrome P450, family 2, subfamily C, polypeptide 9
CYP3A7 cytochrome P450, family 3, subfamily A, polypeptide 7
CYP4X1 cytochrome P450, family 4, subfamily X, polypeptide 1
DBR1 debranching RNA lariats 1
DDX43 DEAD (Asp-Glu-Ala-Asp) box polypeptide 43
DGCR8 DGCR8 microprocessor complex subunit
DHCR7 7-dehydrocholesterol reductase
DHFR dihydrofolate reductase
DHFRL1 dihydrofolate reductase-like 1
DHRS3 dehydrogenase/reductase (SDR family) member 3
DKFZP586I1420 uncharacterized protein DKFZp586I1420
DMC1 DNA meiotic recombinase 1
DNAJC28 DnaJ (Hsp40) homolog, subfamily C, member 28
DNAJC9 DnaJ (Hsp40) homolog, subfamily C, member 9
DOLPP1 dolichyldiphosphatase 1
DRD5 dopamine receptor D5
DUOX2 dual oxidase 2
EEFSEC eukaryotic elongation factor, selenocysteine-tRNA-specific
EMP2 epithelial membrane protein 2
ENPP5 ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative)
ERBB2 erb-b2 receptor tyrosine kinase 2
FAIM Fas apoptotic inhibitory molecule
FAM111A family with sequence similarity 111, member A
FAM111B family with sequence similarity 111, member B
FAM136BP family with sequence similarity 136, member B, pseudogene
FAM13A-AS1 FAM13A antisense RNA 1
FAM193B family with sequence similarity 193, member B
FAM20C family with sequence similarity 20, member C
FAM3B family with sequence similarity 3, member B
FAM50B family with sequence similarity 50, member B
FAM64A family with sequence similarity 64, member A
FAM73B family with sequence similarity 73, member B
FAM83E family with sequence similarity 83, member E
FANCA Fanconi anemia, complementation group A
FBXO5 F-box protein 5
FDCSP follicular dendritic cell secreted protein
FKBP6 FK506 binding protein 6, 36kDa
FMO4 flavin containing monooxygenase 4
FOXD4 forkhead box D4
FOXD4L1 forkhead box D4-like 1
FOXE3 forkhead box E3
FSCB fibrous sheath CABYR binding protein
FUT2 fucosyltransferase 2 (secretor status included)
GALNT14 polypeptide N-acetylgalactosaminyltransferase 14
GCA grancalcin, EF-hand calcium binding protein
GCK glucokinase (hexokinase 4)
GDPGP1 GDP-D-glucose phosphorylase 1
GGT1 gamma-glutamyltransferase 1
GINS2 GINS complex subunit 2 (Psf2 homolog)
GINS3 GINS complex subunit 3 (Psf3 homolog)
GK glycerol kinase
GLB1L galactosidase, beta 1-like
GMNN geminin, DNA replication inhibitor
GOLGA1 golgin A1
GOLGA6L10 golgin A6 family-like 10
GOLGA6L9 golgin A6 family-like 9
GPAT2 glycerol-3-phosphate acyltransferase 2, mitochondrial
GPC2 glypican 2
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)
GPHA2 glycoprotein hormone alpha 2
GPR137C G protein-coupled receptor 137C
GPR87 G protein-coupled receptor 87
GRAMD1C GRAM domain containing 1C
GRB7 growth factor receptor-bound protein 7
GTF3C5 general transcription factor IIIC, polypeptide 5, 63kDa
GTPBP8 GTP-binding protein 8 (putative)
GUSB glucuronidase, beta
H2AFZ H2A histone family, member Z
HAUS5 HAUS augmin-like complex, subunit 5
HAUS8 HAUS augmin-like complex, subunit 8
HIST1H1C histone cluster 1, H1c
HMGB2 high mobility group box 2
HMGN3 high mobility group nucleosomal binding domain 3
HMGN5 high mobility group nucleosome binding domain 5
HSD17B3 hydroxysteroid (17-beta) dehydrogenase 3
HSD17B4 hydroxysteroid (17-beta) dehydrogenase 4
HSPBAP1 HSPB (heat shock 27kDa) associated protein 1
ID2 inhibitor of DNA binding 2, dominant negative helix-loop-helix protein
ID2B inhibitor of DNA binding 2B, dominant negative helix-loop-helix protein (pseudogene)
ID3 inhibitor of DNA binding 3, dominant negative helix-loop-helix protein
ID4 inhibitor of DNA binding 4, dominant negative helix-loop-helix protein
IFNA8 interferon, alpha 8
IFT122 intraflagellar transport 122
IFT80 intraflagellar transport 80
IL20RA interleukin 20 receptor, alpha
INPP5F inositol polyphosphate-5-phosphatase F
ISY1 ISY1 splicing factor homolog (S. cerevisiae)
ITGA2B integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)
ITGB3BP integrin beta 3 binding protein (beta3-endonexin)
IZUMO4 IZUMO family member 4
KATNB1 katanin p80 (WD repeat containing) subunit B 1
KCNE2 potassium channel, voltage gated subfamily E regulatory beta subunit 2
KCNH4 potassium channel, voltage gated eag related subfamily H, member 4
KCNS1 potassium voltage-gated channel, modifier subfamily S, member 1
KCNS3 potassium voltage-gated channel, modifier subfamily S, member 3
KDM8 lysine (K)-specific demethylase 8
KIAA0895L KIAA0895-like
KRT24 keratin 24, type I
LCN2 lipocalin 2
LEP leptin
LHFPL4 lipoma HMGIC fusion partner-like 4
LIG1 ligase I, DNA, ATP-dependent
LINC01547 long intergenic non-protein coding RNA 1547
LOC100132287 uncharacterized LOC100132287
LOC100133331 uncharacterized LOC100133331
LOC285629 uncharacterized LOC285629
LOX lysyl oxidase
LRRC37A leucine rich repeat containing 37A
MBD4 methyl-CpG binding domain protein 4
MCM2 minichromosome maintenance complex component 2
MCM5 minichromosome maintenance complex component 5
MEI1 meiosis inhibitor 1
MEIS1 Meis homeobox 1
MESP2 mesoderm posterior basic helix-loop-helix transcription factor 2
MFF mitochondrial fission factor
MIEN1 migration and invasion enhancer 1
MROH7 maestro heat-like repeat family member 7
MT1G metallothionein 1G
MT1H metallothionein 1H
MTHFS 5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)
MYO3A myosin IIIA
MYO7A myosin VIIA
NDUFB4 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa
NEFH neurofilament, heavy polypeptide
NFKBID nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, delta
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta
NKX2-6 NK2 homeobox 6
NOXA1 NADPH oxidase activator 1
NUDT16 nudix (nucleoside diphosphate linked moiety X)-type motif 16
NUSAP1 nucleolar and spindle associated protein 1
NUTM2G NUT family member 2G
OIP5 Opa interacting protein 5
OOEP oocyte expressed protein
OR1D4 olfactory receptor, family 1, subfamily D, member 4 (gene/pseudogene)
OR1J2 olfactory receptor, family 1, subfamily J, member 2
OR2B6 olfactory receptor, family 2, subfamily B, member 6
OR4D1 olfactory receptor, family 4, subfamily D, member 1
OR52I1 olfactory receptor, family 52, subfamily I, member 1
OR5K4 olfactory receptor, family 5, subfamily K, member 4
OR9A2 olfactory receptor, family 9, subfamily A, member 2
ORAOV1 oral cancer overexpressed 1
PAK1 p21 protein (Cdc42/Rac)-activated kinase 1
PAK6 p21 protein (Cdc42/Rac)-activated kinase 6
PART1 prostate androgen-regulated transcript 1 (non-protein coding)
PAX1 paired box 1
PCBD2 pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2
PCDHB16 protocadherin beta 16
PCDHB9 protocadherin beta 9
PCNA proliferating cell nuclear antigen
PCNP PEST proteolytic signal containing nuclear protein
PCYOX1L prenylcysteine oxidase 1 like
PDCL phosducin-like
PDZK1IP1 PDZK1 interacting protein 1
PGM2L1 phosphoglucomutase 2-like 1
PHF1 PHD finger protein 1
PHF19 PHD finger protein 19
PIGK phosphatidylinositol glycan anchor biosynthesis, class K
PIGX phosphatidylinositol glycan anchor biosynthesis, class X
PITX1 paired-like homeodomain 1
PIWIL1 piwi-like RNA-mediated gene silencing 1
PLSCR2 phospholipid scramblase 2
PLSCR4 phospholipid scramblase 4
PNKP polynucleotide kinase 3'-phosphatase
PNMT phenylethanolamine N-methyltransferase
POLA2 polymerase (DNA directed), alpha 2, accessory subunit
PPIL3 peptidylprolyl isomerase (cyclophilin)-like 3
PPM1M protein phosphatase, Mg2+/Mn2+ dependent, 1M
PPME1 protein phosphatase methylesterase 1
PPP2R5B protein phosphatase 2, regulatory subunit B', beta
PPWD1 peptidylprolyl isomerase domain and WD repeat containing 1
PRMT2 protein arginine methyltransferase 2
PROS1 protein S (alpha)
PSMC3IP PSMC3 interacting protein
PTN pleiotrophin
QRFPR pyroglutamylated RFamide peptide receptor
RAD9A RAD9 homolog A (S. pombe)
RAD9B RAD9 homolog B (S. pombe)
REC8 REC8 meiotic recombination protein
RELL1 RELT-like 1
RFC5 replication factor C (activator 1) 5, 36.5kDa
RFPL1S RFPL1 antisense RNA 1
RMI2 RecQ mediated genome instability 2
RNF133 ring finger protein 133
RNF212 ring finger protein 212
RNF5 ring finger protein 5, E3 ubiquitin protein ligase
RNF5P1 ring finger protein 5, E3 ubiquitin protein ligase pseudogene 1
RPA2 replication protein A2, 32kDa
RPGRIP1 retinitis pigmentosa GTPase regulator interacting protein 1
RPH3AL rabphilin 3A-like (without C2 domains)
RTKN2 rhotekin 2
SASS6 spindle assembly 6 homolog (C. elegans)
SAT1 spermidine/spermine N1-acetyltransferase 1
SEC22A SEC22 vesicle trafficking protein homolog A (S. cerevisiae)
SHCBP1L SHC SH2-domain binding protein 1-like
SHISA5 shisa family member 5
SHMT1 serine hydroxymethyltransferase 1 (soluble)
SHROOM1 shroom family member 1
SKA2 spindle and kinetochore associated complex subunit 2
SKIDA1 SKI/DACH domain containing 1
SLC10A1 solute carrier family 10 (sodium/bile acid cotransporter), member 1
SLC12A6 solute carrier family 12 (potassium/chloride transporter), member 6
SLC18B1 solute carrier family 18, subfamily B, member 1
SLC1A1 solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1
SLC25A35 solute carrier family 25, member 35
SLC2A12 solute carrier family 2 (facilitated glucose transporter), member 12
SLC2A8 solute carrier family 2 (facilitated glucose transporter), member 8
SLC43A3 solute carrier family 43, member 3
SLC9A8 solute carrier family 9, subfamily A (NHE8, cation proton antiporter 8), member 8
SLCO6A1 solute carrier organic anion transporter family, member 6A1
SLFN13 schlafen family member 13
SMPD4 sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)
SMPDL3B sphingomyelin phosphodiesterase, acid-like 3B
SNORA78 small nucleolar RNA, H/ACA box 78
SNRNP25 small nuclear ribonucleoprotein 25kDa (U11/U12)
SOX30 SRY (sex determining region Y)-box 30
SPAG17 sperm associated antigen 17
SPDL1 spindle apparatus coiled-coil protein 1
SPESP1 sperm equatorial segment protein 1
SPHK2 sphingosine kinase 2
SRD5A3 steroid 5 alpha-reductase 3
STAG3 stromal antigen 3
STARD6 StAR-related lipid transfer (START) domain containing 6
STK38 serine/threonine kinase 38
STMN1 stathmin 1
STRA6 stimulated by retinoic acid 6
STX19 syntaxin 19
SUOX sulfite oxidase
SYTL1 synaptotagmin-like 1
TACSTD2 tumor-associated calcium signal transducer 2
TAF1C TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa
TAF7L TAF7-like RNA polymerase II, TATA box binding protein (TBP)-associated factor, 50kDa
TAX1BP3 Tax1 (human T-cell leukemia virus type I) binding protein 3
TBC1D13 TBC1 domain family, member 13
TBC1D8 TBC1 domain family, member 8 (with GRAM domain)
TCF19 transcription factor 19
TDRD10 tudor domain containing 10
TDRD9 tudor domain containing 9
TEPP testis, prostate and placenta expressed
TEX101 testis expressed 101
TFDP2 transcription factor Dp-2 (E2F dimerization partner 2)
THAP10 THAP domain containing 10
TICAM2 toll-like receptor adaptor molecule 2
TIFA TRAF-interacting protein with forkhead-associated domain
TIMELESS timeless circadian clock
TK1 thymidine kinase 1, soluble
TMEM171 transmembrane protein 171
TMEM175 transmembrane protein 175
TMEM180 transmembrane protein 180
TMEM220 transmembrane protein 220
TMPRSS11D transmembrane protease, serine 11D
TMSB15A thymosin beta 15a
TMSB4Y thymosin beta 4, Y-linked
TNFSF9 tumor necrosis factor (ligand) superfamily, member 9
TNIP3 TNFAIP3 interacting protein 3
TOR1B torsin family 1, member B (torsin B)
TOR2A torsin family 2, member A
TRIM59 tripartite motif containing 59
TRIOBP TRIO and F-actin binding protein
TRUB2 TruB pseudouridine (psi) synthase family member 2
TSC1 tuberous sclerosis 1
TSKU tsukushi, small leucine rich proteoglycan
TUBB8 tubulin, beta 8 class VIII
TUBBP5 tubulin, beta pseudogene 5
UBE2B ubiquitin-conjugating enzyme E2B
UBE2D2 ubiquitin-conjugating enzyme E2D 2
UBXN11 UBX domain protein 11
UPB1 ureidopropionase, beta
UQCRHL ubiquinol-cytochrome c reductase hinge protein-like
VLDLR very low density lipoprotein receptor
VNN1 vanin 1
WDR34 WD repeat domain 34
WRB tryptophan rich basic protein
YBX2 Y box binding protein 2
ZBTB6 zinc finger and BTB domain containing 6
ZDHHC12 zinc finger, DHHC-type containing 12
ZFR2 zinc finger RNA binding protein 2
ZGRF1 zinc finger, GRF-type containing 1
ZMAT1 zinc finger, matrin-type 1
ZNF157 zinc finger protein 157
ZNF300 zinc finger protein 300
ZNF541 zinc finger protein 541
ZNF620 zinc finger protein 620
ZNF700 zinc finger protein 700
ZNF76 zinc finger protein 76
ZNF77 zinc finger protein 77
ZNF79 zinc finger protein 79
ZPBP2 zona pellucida binding protein 2
ZWINT ZW10 interacting kinetochore protein

low expression

Symbol Name
BET1L Bet1 golgi vesicular membrane trafficking protein-like
DDB1 damage-specific DNA binding protein 1, 127kDa
IPO7 importin 7
NUP98 nucleoporin 98kDa
USP47 ubiquitin specific peptidase 47
VPS37C vacuolar protein sorting 37 homolog C (S. cerevisiae)