Chromatin organization Gene Set

Dataset Reactome Pathways
Category structural or functional annotations
Type pathway
Description Any process that results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin. (Gene Ontology, GO_0006325)
External Link http://www.reactome.org/PathwayBrowser/#/R-HSA-4839726
Similar Terms
Downloads & Tools

Genes

208 proteins participating in the Chromatin organization pathway from the Reactome Pathways dataset.

Symbol Name
ACTB actin, beta
ACTL6A actin-like 6A
ACTL6B actin-like 6B
ARID1A AT rich interactive domain 1A (SWI-like)
ARID1B AT rich interactive domain 1B (SWI1-like)
ARID2 AT rich interactive domain 2 (ARID, RFX-like)
ARID4A AT rich interactive domain 4A (RBP1-like)
ARID4B AT rich interactive domain 4B (RBP1-like)
ARID5B AT rich interactive domain 5B (MRF1-like)
ASH2L ash2 (absent, small, or homeotic)-like (Drosophila)
ATF2 activating transcription factor 2
ATF7IP activating transcription factor 7 interacting protein
ATXN7 ataxin 7
ATXN7L3 ataxin 7-like 3
BRD1 bromodomain containing 1
BRD8 bromodomain containing 8
BRMS1 breast cancer metastasis suppressor 1
BRPF1 bromodomain and PHD finger containing, 1
BRPF3 bromodomain and PHD finger containing, 3
CARM1 coactivator-associated arginine methyltransferase 1
CCDC101 coiled-coil domain containing 101
CCND1 cyclin D1
CDK4 cyclin-dependent kinase 4
CHD3 chromodomain helicase DNA binding protein 3
CHD4 chromodomain helicase DNA binding protein 4
CLOCK clock circadian regulator
COPRS coordinator of PRMT5, differentiation stimulator
CREBBP CREB binding protein
CSRP2BP CSRP2 binding protein
DMAP1 DNA methyltransferase 1 associated protein 1
DNMT3A DNA (cytosine-5-)-methyltransferase 3 alpha
DR1 down-regulator of transcription 1, TBP-binding (negative cofactor 2)
EHMT1 euchromatic histone-lysine N-methyltransferase 1
EHMT2 euchromatic histone-lysine N-methyltransferase 2
ELP2 elongator acetyltransferase complex subunit 2
ELP3 elongator acetyltransferase complex subunit 3
ELP4 elongator acetyltransferase complex subunit 4
ELP5 elongator acetyltransferase complex subunit 5
ELP6 elongator acetyltransferase complex subunit 6
ENY2 enhancer of yellow 2 homolog (Drosophila)
EP300 E1A binding protein p300
EP400 E1A binding protein p400
EPC1 enhancer of polycomb homolog 1 (Drosophila)
GATAD2A GATA zinc finger domain containing 2A
GATAD2B GATA zinc finger domain containing 2B
GPS2 G protein pathway suppressor 2
H2AFB1 H2A histone family, member B1
H2AFX H2A histone family, member X
H2AFZ H2A histone family, member Z
HAT1 histone acetyltransferase 1
HCFC1 host cell factor C1
HDAC1 histone deacetylase 1
HDAC10 histone deacetylase 10
HDAC2 histone deacetylase 2
HDAC3 histone deacetylase 3
HDAC8 histone deacetylase 8
HIST1H2AA histone cluster 1, H2aa
HIST1H2AB histone cluster 1, H2ab
HIST1H2AC histone cluster 1, H2ac
HIST1H2AD histone cluster 1, H2ad
HIST1H2AG histone cluster 1, H2ag
HIST1H2AH histone cluster 1, H2ah
HIST1H2AJ histone cluster 1, H2aj
HIST1H2BA histone cluster 1, H2ba
HIST1H2BB histone cluster 1, H2bb
HIST1H2BC histone cluster 1, H2bc
HIST1H2BD histone cluster 1, H2bd
HIST1H2BH histone cluster 1, H2bh
HIST1H2BJ histone cluster 1, H2bj
HIST1H2BK histone cluster 1, H2bk
HIST1H2BL histone cluster 1, H2bl
HIST1H2BM histone cluster 1, H2bm
HIST1H2BN histone cluster 1, H2bn
HIST1H2BO histone cluster 1, H2bo
HIST1H3A histone cluster 1, H3a
HIST1H4A histone cluster 1, H4a
HIST2H2AA3 histone cluster 2, H2aa3
HIST2H2AB histone cluster 2, H2ab
HIST2H2AC histone cluster 2, H2ac
HIST2H2BE histone cluster 2, H2be
HIST2H2BF histone cluster 2, H2bf
HIST2H3A histone cluster 2, H3a
HIST3H2A histone cluster 3, H2a
HIST3H2BB histone cluster 3, H2bb
HMG20B high mobility group 20B
IKBKAP inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein
ING3 inhibitor of growth family, member 3
ING4 inhibitor of growth family, member 4
ING5 inhibitor of growth family, member 5
JADE1 jade family PHD finger 1
JADE2 jade family PHD finger 2
JADE3 jade family PHD finger 3
JAK2 Janus kinase 2
KANSL1 KAT8 regulatory NSL complex subunit 1
KANSL2 KAT8 regulatory NSL complex subunit 2
KANSL3 KAT8 regulatory NSL complex subunit 3
KAT2A K(lysine) acetyltransferase 2A
KAT2B K(lysine) acetyltransferase 2B
KAT5 K(lysine) acetyltransferase 5
KAT6A K(lysine) acetyltransferase 6A
KAT6B K(lysine) acetyltransferase 6B
KAT7 K(lysine) acetyltransferase 7
KAT8 K(lysine) acetyltransferase 8
KDM1A lysine (K)-specific demethylase 1A
KDM1B lysine (K)-specific demethylase 1B
KDM2A lysine (K)-specific demethylase 2A
KDM2B lysine (K)-specific demethylase 2B
KDM3A lysine (K)-specific demethylase 3A
KDM3B lysine (K)-specific demethylase 3B
KDM4A lysine (K)-specific demethylase 4A
KDM4B lysine (K)-specific demethylase 4B
KDM4C lysine (K)-specific demethylase 4C
KDM4D lysine (K)-specific demethylase 4D
KDM5A lysine (K)-specific demethylase 5A
KDM5B lysine (K)-specific demethylase 5B
KDM5C lysine (K)-specific demethylase 5C
KDM5D lysine (K)-specific demethylase 5D
KDM6A lysine (K)-specific demethylase 6A
KDM6B lysine (K)-specific demethylase 6B
KDM7A lysine (K)-specific demethylase 7A
KMT2A lysine (K)-specific methyltransferase 2A
KMT2B lysine (K)-specific methyltransferase 2B
KMT2C lysine (K)-specific methyltransferase 2C
KMT2D lysine (K)-specific methyltransferase 2D
KMT2E lysine (K)-specific methyltransferase 2E
MBD3 methyl-CpG binding domain protein 3
MBIP MAP3K12 binding inhibitory protein 1
MCRS1 microspherule protein 1
MEAF6 MYST/Esa1-associated factor 6
MORF4L1 mortality factor 4 like 1
MORF4L2 mortality factor 4 like 2
MRGBP MRG/MORF4L binding protein
MSL1 male-specific lethal 1 homolog (Drosophila)
MSL2 male-specific lethal 2 homolog (Drosophila)
MSL3 male-specific lethal 3 homolog (Drosophila)
MTA1 metastasis associated 1
MTA2 metastasis associated 1 family, member 2
MTA3 metastasis associated 1 family, member 3
NCOR1 nuclear receptor corepressor 1
NCOR2 nuclear receptor corepressor 2
NSD1 nuclear receptor binding SET domain protein 1
OGT O-linked N-acetylglucosamine (GlcNAc) transferase
PBRM1 polybromo 1
PHF2 PHD finger protein 2
PHF20 PHD finger protein 20
PHF21A PHD finger protein 21A
PHF8 PHD finger protein 8
PRDM8 PR domain containing 8
PRDM9 PR domain containing 9
PRMT1 protein arginine methyltransferase 1
PRMT5 protein arginine methyltransferase 5
PRMT6 protein arginine methyltransferase 6
PRMT7 protein arginine methyltransferase 7
RBBP4 retinoblastoma binding protein 4
RBBP5 retinoblastoma binding protein 5
RBBP7 retinoblastoma binding protein 7
RCOR1 REST corepressor 1
REST RE1-silencing transcription factor
RUVBL1 RuvB-like AAA ATPase 1
RUVBL2 RuvB-like AAA ATPase 2
SAP130 Sin3A-associated protein, 130kDa
SAP18 Sin3A-associated protein, 18kDa
SAP30 Sin3A-associated protein, 30kDa
SAP30L SAP30-like
SETD1A SET domain containing 1A
SETD1B SET domain containing 1B
SETD2 SET domain containing 2
SETD7 SET domain containing (lysine methyltransferase) 7
SETDB1 SET domain, bifurcated 1
SETDB2 SET domain, bifurcated 2
SMARCA2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
SMARCB1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1
SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
SMARCC2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2
SMARCD1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
SMARCD2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
SMARCD3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3
SMARCE1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1
SMYD2 SET and MYND domain containing 2
SMYD3 SET and MYND domain containing 3
SUDS3 suppressor of defective silencing 3 homolog (S. cerevisiae)
SUPT20H suppressor of Ty 20 homolog (S. cerevisiae)
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae)
SUPT7L suppressor of Ty 7 (S. cerevisiae)-like
SUV39H1 suppressor of variegation 3-9 homolog 1 (Drosophila)
SUV39H2 suppressor of variegation 3-9 homolog 2 (Drosophila)
TADA1 transcriptional adaptor 1
TADA2A transcriptional adaptor 2A
TADA2B transcriptional adaptor 2B
TADA3 transcriptional adaptor 3
TAF10 TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 30kDa
TAF12 TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa
TAF5L TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa
TAF6L TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa
TAF9 TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa
TBL1X transducin (beta)-like 1X-linked
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1
TRRAP transformation/transcription domain-associated protein
USP22 ubiquitin specific peptidase 22
VPS72 vacuolar protein sorting 72 homolog (S. cerevisiae)
WDR5 WD repeat domain 5
WDR77 WD repeat domain 77
WHSC1 Wolf-Hirschhorn syndrome candidate 1
WHSC1L1 Wolf-Hirschhorn syndrome candidate 1-like 1
YEATS2 YEATS domain containing 2
YEATS4 YEATS domain containing 4
ZZZ3 zinc finger, ZZ-type containing 3