Cholesterol, total Gene Set

Dataset GWAS Catalog SNP-Phenotype Associations
Category disease or phenotype associations
Type phenotype
Description A total cholesterol measurement is the quantification of cholesterol in blood, total cholesterol is defined as the sum of HDL, LDL, and VLDL. (Experimental Factor Ontology, EFO_0004574)
External Link https://www.ebi.ac.uk/gwas/search?query=Cholesterol, total
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Genes

61 genes associated with the Cholesterol, total phenotype in GWAS datasets from the GWAS Catalog SNP-Phenotype Associations dataset.

Symbol Name Standardized Value
LDLR low density lipoprotein receptor 2.35448
CELSR2 cadherin, EGF LAG seven-pass G-type receptor 2 2.21769
APOC1 apolipoprotein C-I 2.13494
APOB apolipoprotein B 2.08724
DOCK7 dedicator of cytokinesis 7 1.78332
SUGP1 SURP and G patch domain containing 1 1.76331
HMGCR 3-hydroxy-3-methylglutaryl-CoA reductase 1.73876
ABCG8 ATP-binding cassette, sub-family G (WHITE), member 8 1.72959
ZPR1 ZPR1 zinc finger 1.61087
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 1.57228
LOC102724766 uncharacterized LOC102724766 1.49998
GCKR glucokinase (hexokinase 4) regulator 1.45248
TIMD4 T-cell immunoglobulin and mucin domain containing 4 1.43646
PCSK9 proprotein convertase subtilisin/kexin type 9 1.41169
FADS1 fatty acid desaturase 1 1.37865
LOC157273 uncharacterized LOC157273 1.3664
HNF4A hepatocyte nuclear factor 4, alpha 1.16698
SLC22A1 solute carrier family 22 (organic cation transporter), member 1 1.13507
HLA-DRA major histocompatibility complex, class II, DR alpha 1.09169
TOMM40 translocase of outer mitochondrial membrane 40 homolog (yeast) 1.00661
ZHX3 zinc fingers and homeoboxes 3 0.932983
HNF1A HNF1 homeobox A 0.927754
FUT2 fucosyltransferase 2 (secretor status included) 0.910257
DNAH11 dynein, axonemal, heavy chain 11 0.910257
TOP1 topoisomerase (DNA) I 0.910257
GPAM glycerol-3-phosphate acyltransferase, mitochondrial 0.870394
MYLIP myosin regulatory light chain interacting protein 0.849268
ZNF101 zinc finger protein 101 0.849268
NPC1L1 NPC1-like 1 0.835701
ST3GAL4 ST3 beta-galactoside alpha-2,3-sialyltransferase 4 0.827738
LINC01132 long intergenic non-protein coding RNA 1132 0.781677
TTC39B tetratricopeptide repeat domain 39B 0.765464
RAB3GAP1 RAB3 GTPase activating protein subunit 1 (catalytic) 0.765464
MARC1 mitochondrial amidoxime reducing component 1 0.729497
HFE hemochromatosis 0.696558
ABCB11 ATP-binding cassette, sub-family B (MDR/TAP), member 11 0.679413
TMEM57 transmembrane protein 57 0.673878
SPTY2D1 SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae) 0.656287
VIM-AS1 VIM antisense RNA 1 0.626595
FER1L4 fer-1-like family member 4, pseudogene (functional) 0.612268
DOK7 docking protein 7 0.592545
FRK fyn-related Src family tyrosine kinase 0.572839
FADS2 fatty acid desaturase 2 0.572839
C7ORF50 chromosome 7 open reading frame 50 0.560615
CETP cholesteryl ester transfer protein, plasma 0.552116
VLDLR very low density lipoprotein receptor 0.534343
PLEC plectin 0.526478
CSNK1G3 casein kinase 1, gamma 3 0.499091
PHC1 polyhomeotic homolog 1 (Drosophila) 0.499091
FAM117B family with sequence similarity 117, member B 0.499091
RAF1 Raf-1 proto-oncogene, serine/threonine kinase 0.499091
ASAP3 ArfGAP with SH3 domain, ankyrin repeat and PH domain 3 0.455873
MARCH8 membrane-associated ring finger (C3HC4) 8, E3 ubiquitin protein ligase 0.444144
PHLDB1 pleckstrin homology-like domain, family B, member 1 0.434785
EFCAB13 EF-hand calcium binding domain 13 0.434785
PPARA peroxisome proliferator-activated receptor alpha 0.434785
CMTM6 CKLF-like MARVEL transmembrane domain containing 6 0.405958
TRPS1 trichorhinophalangeal syndrome I 0.405958
EVI5 ecotropic viral integration site 5 0.405958
PXK PX domain containing serine/threonine kinase 0.377988
TOM1 target of myb1 (chicken) 0.369252