Brain stem Gene Set

Dataset Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles
Category transcriptomics
Type tissue
Description The part of the brain composed of the mesencephalon, pons, and medulla oblongata and connecting the spinal cord with the forebrain and cerebrum. (BRENDA Tissue and Enzyme Source Ontology, BTO_0000146)
Similar Terms
Downloads & Tools

Genes

70 genes with high or low expression in Brain stem relative to other tissues from the Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles dataset.

high expression

Symbol Name Standardized Value

low expression

Symbol Name Standardized Value
SLC12A1 solute carrier family 12 (sodium/potassium/chloride transporter), member 1 -3.09088
GOLGA4 golgin A4 -2.51426
PRR15L proline rich 15-like -2.1959
RCCD1 RCC1 domain containing 1 -2.18778
CYTIP cytohesin 1 interacting protein -2.02849
SLC22A1 solute carrier family 22 (organic cation transporter), member 1 -2.02271
IL22RA1 interleukin 22 receptor, alpha 1 -1.94181
SLC13A1 solute carrier family 13 (sodium/sulfate symporter), member 1 -1.85648
ZNF394 zinc finger protein 394 -1.84254
SLC2A9 solute carrier family 2 (facilitated glucose transporter), member 9 -1.8263
DPP4 dipeptidyl-peptidase 4 -1.81292
FIGLA folliculogenesis specific basic helix-loop-helix -1.70687
CCND2 cyclin D2 -1.68108
FFAR2 free fatty acid receptor 2 -1.68022
GPRC5A G protein-coupled receptor, class C, group 5, member A -1.65369
TNFRSF8 tumor necrosis factor receptor superfamily, member 8 -1.65032
SLC26A1 solute carrier family 26 (anion exchanger), member 1 -1.56628
BAIAP2L2 BAI1-associated protein 2-like 2 -1.56349
RHBG Rh family, B glycoprotein (gene/pseudogene) -1.48635
ENTPD8 ectonucleoside triphosphate diphosphohydrolase 8 -1.43941
GNRH1 gonadotropin-releasing hormone 1 (luteinizing-releasing hormone) -1.40753
SRPX sushi-repeat containing protein, X-linked -1.30784
MIS18BP1 MIS18 binding protein 1 -1.29321
SLC17A4 solute carrier family 17, member 4 -1.2769
MED9 mediator complex subunit 9 -1.27299
YPEL1 yippee-like 1 (Drosophila) -1.2444
ZNF595 zinc finger protein 595 -1.23983
PEX11G peroxisomal biogenesis factor 11 gamma -1.2373
LIPT1 lipoyltransferase 1 -1.22759
CLEC4A C-type lectin domain family 4, member A -1.22351
SLCO1A2 solute carrier organic anion transporter family, member 1A2 -1.2001
MOB3A MOB kinase activator 3A -1.17536
MED22 mediator complex subunit 22 -1.16715
PLIN1 perilipin 1 -1.13145
NAPEPLD N-acyl phosphatidylethanolamine phospholipase D -1.13064
NCAPG2 non-SMC condensin II complex, subunit G2 -1.12588
SLC10A2 solute carrier family 10 (sodium/bile acid cotransporter), member 2 -1.1215
SLC39A11 solute carrier family 39, member 11 -1.12027
TAS1R2 taste receptor, type 1, member 2 -1.11578
FLT3LG fms-related tyrosine kinase 3 ligand -1.11535
MMP21 matrix metallopeptidase 21 -1.10901
FAM96A family with sequence similarity 96, member A -1.0994
GPR55 G protein-coupled receptor 55 -1.09812
CHMP6 charged multivesicular body protein 6 -1.09712
R3HDML R3H domain containing-like -1.09386
SLC25A43 solute carrier family 25, member 43 -1.08877
CDH16 cadherin 16, KSP-cadherin -1.08717
NCAPG non-SMC condensin I complex, subunit G -1.08618
CHST9 carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9 -1.08306
EFNA4 ephrin-A4 -1.08175
YDJC YdjC homolog (bacterial) -1.07169
CLCA4 chloride channel accessory 4 -1.07149
FOXA3 forkhead box A3 -1.06711
IL2RG interleukin 2 receptor, gamma -1.06415
BHLHE23 basic helix-loop-helix family, member e23 -1.06365
CFI complement factor I -1.06314
LAPTM5 lysosomal protein transmembrane 5 -1.05941
SLC35A4 solute carrier family 35, member A4 -1.0594
MAP3K10 mitogen-activated protein kinase kinase kinase 10 -1.05864
C11ORF84 chromosome 11 open reading frame 84 -1.04635
EGLN3 egl-9 family hypoxia-inducible factor 3 -1.04507
RAD51C RAD51 paralog C -1.04045
OPN1LW opsin 1 (cone pigments), long-wave-sensitive -1.0392
GP9 glycoprotein IX (platelet) -1.03197
CASP6 caspase 6, apoptosis-related cysteine peptidase -1.02928
C1ORF56 chromosome 1 open reading frame 56 -1.02088
ALAS2 5'-aminolevulinate synthase 2 -1.01104
KISS1R KISS1 receptor -1.0061
TAS2R10 taste receptor, type 2, member 10 -1.00323
SLC22A14 solute carrier family 22, member 14 -1.00259