Brain Lower Grade Glioma_LGG_TCGA-TQ-A7RJ-01A-11R-A33Z-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

292 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-TQ-A7RJ-01A-11R-A33Z-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ACOXL acyl-CoA oxidase-like
ACSM2A acyl-CoA synthetase medium-chain family member 2A
ACTL7A actin-like 7A
ADAM30 ADAM metallopeptidase domain 30
ADAMTSL2 ADAMTS-like 2
ADAMTSL3 ADAMTS-like 3
ADGRV1 adhesion G protein-coupled receptor V1
AGAP4 ArfGAP with GTPase domain, ankyrin repeat and PH domain 4
AHCTF1 AT hook containing transcription factor 1
AHCYL1 adenosylhomocysteinase-like 1
AKR7A2P1 aldo-keto reductase family 7, member A2 pseudogene 1
AMOTL1 angiomotin like 1
ANKDD1A ankyrin repeat and death domain containing 1A
ANP32A-IT1 ANP32A intronic transcript 1
ANXA8 annexin A8
ASB17 ankyrin repeat and SOCS box containing 17
ASCL4 achaete-scute family bHLH transcription factor 4
ATP1A4 ATPase, Na+/K+ transporting, alpha 4 polypeptide
AWAT1 acyl-CoA wax alcohol acyltransferase 1
BCL6 B-cell CLL/lymphoma 6
BRD7P3 bromodomain containing 7 pseudogene 3
C10ORF113 chromosome 10 open reading frame 113
C12ORF29 chromosome 12 open reading frame 29
C17ORF105 chromosome 17 open reading frame 105
C20ORF197 chromosome 20 open reading frame 197
C4ORF45 chromosome 4 open reading frame 45
CCDC163P coiled-coil domain containing 163, pseudogene
CDC14A cell division cycle 14A
CDH20 cadherin 20, type 2
CEACAM20 carcinoembryonic antigen-related cell adhesion molecule 20
CERS3 ceramide synthase 3
CFAP44 cilia and flagella associated protein 44
CLRN2 clarin 2
CNBD1 cyclic nucleotide binding domain containing 1
COL28A1 collagen, type XXVIII, alpha 1
CRLF2 cytokine receptor-like factor 2
CROCCP2 ciliary rootlet coiled-coil, rootletin pseudogene 2
CROCCP3 ciliary rootlet coiled-coil, rootletin pseudogene 3
CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1
CTDSPL CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like
CYCSP52 cytochrome c, somatic pseudogene 52
CYP2B7P cytochrome P450, family 2, subfamily B, polypeptide 7, pseudogene
D2HGDH D-2-hydroxyglutarate dehydrogenase
DEFB118 defensin, beta 118
DMKN dermokine
DNAH7 dynein, axonemal, heavy chain 7
DNMBP-AS1 DNMBP antisense RNA 1
DPPA5 developmental pluripotency associated 5
DUSP27 dual specificity phosphatase 27 (putative)
EED embryonic ectoderm development
ENPP3 ectonucleotide pyrophosphatase/phosphodiesterase 3
ENPP5 ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative)
ENTPD8 ectonucleoside triphosphate diphosphohydrolase 8
EPPK1 epiplakin 1
EPS15L1 epidermal growth factor receptor pathway substrate 15-like 1
ERAS ES cell expressed Ras
ETNPPL ethanolamine-phosphate phospho-lyase
FABP2 fatty acid binding protein 2, intestinal
FAM24A family with sequence similarity 24, member A
FBXO42 F-box protein 42
FDPSP2 farnesyl diphosphate synthase pseudogene 2
FGD2 FYVE, RhoGEF and PH domain containing 2
FSTL5 follistatin-like 5
GATA5 GATA binding protein 5
GBP7 guanylate binding protein 7
GCM2 glial cells missing homolog 2 (Drosophila)
GHSR growth hormone secretagogue receptor
GK2 glycerol kinase 2
GMNN geminin, DNA replication inhibitor
GOLGA6L5P golgin A6 family-like 5, pseudogene
GPAM glycerol-3-phosphate acyltransferase, mitochondrial
GREB1L growth regulation by estrogen in breast cancer-like
GRXCR1 glutaredoxin, cysteine rich 1
GSTM2P1 glutathione S-transferase mu 2 (muscle) pseudogene 1
GTF2H2B general transcription factor IIH, polypeptide 2B (pseudogene)
HERC2P2 hect domain and RLD 2 pseudogene 2
HIST1H4F histone cluster 1, H4f
HMGB3P1 high mobility group box 3 pseudogene 1
HMOX2 heme oxygenase 2
HPSE2 heparanase 2 (inactive)
HRSP12 heat-responsive protein 12
IFNE interferon, epsilon
IGSF1 immunoglobulin superfamily, member 1
IGSF3 immunoglobulin superfamily, member 3
IL37 interleukin 37
IL9 interleukin 9
INTS10 integrator complex subunit 10
IZUMO1 izumo sperm-egg fusion 1
KCNG2 potassium channel, voltage gated modifier subfamily G, member 2
KDM4E lysine (K)-specific demethylase 4E
KIAA1671 KIAA1671
KLHL17 kelch-like family member 17
KRT38 keratin 38, type I
KRT9 keratin 9, type I
KRTAP13-4 keratin associated protein 13-4
KRTAP24-1 keratin associated protein 24-1
KRTAP26-1 keratin associated protein 26-1
LDLRAD1 low density lipoprotein receptor class A domain containing 1
LDLRAD4 low density lipoprotein receptor class A domain containing 4
LIFR leukemia inhibitory factor receptor alpha
LILRP2 leukocyte immunoglobulin-like receptor pseudogene 2
LINC00479 long intergenic non-protein coding RNA 479
LOC100128542
LOC145474 uncharacterized LOC145474
LOC340357 uncharacterized LOC340357
LOC647859 occludin pseudogene
LOC728989 phosphodiesterase 4D interacting protein pseudogene
LPIN1 lipin 1
LRP1B low density lipoprotein receptor-related protein 1B
LYPD4 LY6/PLAUR domain containing 4
MAF v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog
MAGEA8 melanoma antigen family A8
MBOAT4 membrane bound O-acyltransferase domain containing 4
MERTK MER proto-oncogene, tyrosine kinase
MRC1 mannose receptor, C type 1
NAA11 N(alpha)-acetyltransferase 11, NatA catalytic subunit
NAA40 N(alpha)-acetyltransferase 40, NatD catalytic subunit
NBPF14 neuroblastoma breakpoint family, member 14
NCF1B neutrophil cytosolic factor 1B pseudogene
NCF1C neutrophil cytosolic factor 1C pseudogene
NEDD4 neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase
NLRP13 NLR family, pyrin domain containing 13
NOBOX NOBOX oogenesis homeobox
NR2F1 nuclear receptor subfamily 2, group F, member 1
NT5C2 5'-nucleotidase, cytosolic II
NTN5 netrin 5
OCLM oculomedin
OR10K2 olfactory receptor, family 10, subfamily K, member 2
OR11G2 olfactory receptor, family 11, subfamily G, member 2
OR1K1 olfactory receptor, family 1, subfamily K, member 1
OR2T27 olfactory receptor, family 2, subfamily T, member 27
OR4F21 olfactory receptor, family 4, subfamily F, member 21
OR4P4 olfactory receptor, family 4, subfamily P, member 4
OR51S1 olfactory receptor, family 51, subfamily S, member 1
OR52A1 olfactory receptor, family 52, subfamily A, member 1
OR52B4 olfactory receptor, family 52, subfamily B, member 4 (gene/pseudogene)
OR52L1 olfactory receptor, family 52, subfamily L, member 1
OR52M1 olfactory receptor, family 52, subfamily M, member 1
OR56B4 olfactory receptor, family 56, subfamily B, member 4
OR5B3 olfactory receptor, family 5, subfamily B, member 3
OR6A2 olfactory receptor, family 6, subfamily A, member 2
OR8A1 olfactory receptor, family 8, subfamily A, member 1
OR8S1 olfactory receptor, family 8, subfamily S, member 1
OR9A4 olfactory receptor, family 9, subfamily A, member 4
OSBPL11 oxysterol binding protein-like 11
P2RX6P purinergic receptor P2X, ligand gated ion channel, 6 pseudogene
PAPLN papilin, proteoglycan-like sulfated glycoprotein
PCDHGB1 protocadherin gamma subfamily B, 1
PDILT protein disulfide isomerase-like, testis expressed
PEBP4 phosphatidylethanolamine-binding protein 4
PEX11A peroxisomal biogenesis factor 11 alpha
PITX3 paired-like homeodomain 3
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific)
PLEKHN1 pleckstrin homology domain containing, family N member 1
PLET1 placenta expressed transcript 1
PLIN1 perilipin 1
POM121L10P POM121 transmembrane nucleoporin-like 10, pseudogene
PPARA peroxisome proliferator-activated receptor alpha
PPP1R2P9 protein phosphatase 1, regulatory (inhibitor) subunit 2 pseudogene 9
PRAMEF1 PRAME family member 1
PRAMEF20 PRAME family member 20
PRAMEF4 PRAME family member 4
PRB3 proline-rich protein BstNI subfamily 3
PRICKLE4 prickle homolog 4 (Drosophila)
PRKX protein kinase, X-linked
PRLHR prolactin releasing hormone receptor
PROP1 PROP paired-like homeobox 1
PRR23A proline rich 23A
PRR25 proline rich 25
PRSS58 protease, serine, 58
PRTG protogenin
PTPRF protein tyrosine phosphatase, receptor type, F
R3HDML R3H domain containing-like
RAB10 RAB10, member RAS oncogene family
RAB41 RAB41, member RAS oncogene family
REPS1 RALBP1 associated Eps domain containing 1
RFPL3 ret finger protein-like 3
RGS6 regulator of G-protein signaling 6
RHOXF2B Rhox homeobox family, member 2B
RIC8B RIC8 guanine nucleotide exchange factor B
RNF39 ring finger protein 39
RPL3L ribosomal protein L3-like
RSG1 REM2 and RAB-like small GTPase 1
RWDD3 RWD domain containing 3
RXRA retinoid X receptor, alpha
RYR1 ryanodine receptor 1 (skeletal)
SAFB2 scaffold attachment factor B2
SAMD13 sterile alpha motif domain containing 13
SCARNA1 small Cajal body-specific RNA 1
SCARNA21 small Cajal body-specific RNA 21
SCARNA7 small Cajal body-specific RNA 7
SCARNA8 small Cajal body-specific RNA 8
SELL selectin L
SERPINI2 serpin peptidase inhibitor, clade I (pancpin), member 2
SESN1 sestrin 1
SFMBT2 Scm-like with four mbt domains 2
SFRP2 secreted frizzled-related protein 2
SLC14A1 solute carrier family 14 (urea transporter), member 1 (Kidd blood group)
SLC15A2 solute carrier family 15 (oligopeptide transporter), member 2
SLC22A6 solute carrier family 22 (organic anion transporter), member 6
SLC26A5 solute carrier family 26 (anion exchanger), member 5
SNN stannin
SNORA10 small nucleolar RNA, H/ACA box 10
SNORA11 small nucleolar RNA, H/ACA box 11
SNORA11E small nucleolar RNA, H/ACA box 11E
SNORA14B small nucleolar RNA, H/ACA box 14B
SNORA20 small nucleolar RNA, H/ACA box 20
SNORA22 small nucleolar RNA, H/ACA box 22
SNORA26 small nucleolar RNA, H/ACA box 26
SNORA27 small nucleolar RNA, H/ACA box 27
SNORA31 small nucleolar RNA, H/ACA box 31
SNORA34 small nucleolar RNA, H/ACA box 34
SNORA36A small nucleolar RNA, H/ACA box 36A
SNORA38 small nucleolar RNA, H/ACA box 38
SNORA38B small nucleolar RNA, H/ACA box 38B
SNORA45A small nucleolar RNA, H/ACA box 45A
SNORA46 small nucleolar RNA, H/ACA box 46
SNORA47 small nucleolar RNA, H/ACA box 47
SNORA48 small nucleolar RNA, H/ACA box 48
SNORA49 small nucleolar RNA, H/ACA box 49
SNORA52 small nucleolar RNA, H/ACA box 52
SNORA53 small nucleolar RNA, H/ACA box 53
SNORA56 small nucleolar RNA, H/ACA box 56
SNORA57 small nucleolar RNA, H/ACA box 57
SNORA5A small nucleolar RNA, H/ACA box 5A
SNORA61 small nucleolar RNA, H/ACA box 61
SNORA62 small nucleolar RNA, H/ACA box 62
SNORA63 small nucleolar RNA, H/ACA box 63
SNORA67 small nucleolar RNA, H/ACA box 67
SNORA68 small nucleolar RNA, H/ACA box 68
SNORA75 small nucleolar RNA, H/ACA box 75
SNORA76A small nucleolar RNA, H/ACA box 76A
SNORA77 small nucleolar RNA, H/ACA box 77
SNORA80E small nucleolar RNA, H/ACA box 80E
SNORD10 small nucleolar RNA, C/D box 10
SNORD15B small nucleolar RNA, C/D box 15B
SNORD22 small nucleolar RNA, C/D box 22
SNORD67 small nucleolar RNA, C/D box 67
SNORD8 small nucleolar RNA, C/D box 8
SNORD89 small nucleolar RNA, C/D box 89
SNORD94 small nucleolar RNA, C/D box 94
SPATA21 spermatogenesis associated 21
SPATA31A5 SPATA31 subfamily A, member 5
SSPO SCO-spondin
SSUH2 ssu-2 homolog (C. elegans)
ST3GAL6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6
STAB2 stabilin 2
STK17B serine/threonine kinase 17b
STOX1 storkhead box 1
SYTL4 synaptotagmin-like 4
TAF8 TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa
TAS2R38 taste receptor, type 2, member 38
TAS2R39 taste receptor, type 2, member 39
TEX13A testis expressed 13A
TEX43 testis expressed 43
TLE1 transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila)
TLR4 toll-like receptor 4
TMEM14E transmembrane protein 14E
TMEM249 transmembrane protein 249
TMPRSS11B transmembrane protease, serine 11B
TRIM17 tripartite motif containing 17
TRIM50 tripartite motif containing 50
TRIM60 tripartite motif containing 60
TRIM74 tripartite motif containing 74
TSC22D3 TSC22 domain family, member 3
TSHB thyroid stimulating hormone, beta
TSPAN14 tetraspanin 14
TSSK3 testis-specific serine kinase 3
UBAP2 ubiquitin associated protein 2
UBE2DNL ubiquitin-conjugating enzyme E2D N-terminal like (pseudogene)
UBE2Q2P1 ubiquitin-conjugating enzyme E2Q family member 2 pseudogene 1
UBR4 ubiquitin protein ligase E3 component n-recognin 4
ULK4P2 ULK4 pseudogene 2
USP50 ubiquitin specific peptidase 50
VENTXP1 VENT homeobox pseudogene 1
VENTXP7 VENT homeobox pseudogene 7
WBP2NL WBP2 N-terminal like
ZC2HC1B zinc finger, C2HC-type containing 1B
ZFP92 ZFP92 zinc finger protein
ZMYND15 zinc finger, MYND-type containing 15
ZNF192P1 zinc finger protein 192 pseudogene 1
ZNF296 zinc finger protein 296
ZNF395 zinc finger protein 395
ZNF703 zinc finger protein 703
ZNF710 zinc finger protein 710

low expression

Symbol Name
BECN1 beclin 1, autophagy related
NSRP1 nuclear speckle splicing regulatory protein 1
PSME3 proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki)
RHOT1 ras homolog family member T1
RWDD2B RWD domain containing 2B
TMEM199 transmembrane protein 199
TNFAIP1 tumor necrosis factor, alpha-induced protein 1 (endothelial)