Brain Lower Grade Glioma_LGG_TCGA-TM-A7C4-01A-11R-A32Q-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

401 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-TM-A7C4-01A-11R-A32Q-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ACVR1C activin A receptor, type IC
ACYP1 acylphosphatase 1, erythrocyte (common) type
ADAD2 adenosine deaminase domain containing 2
ADAM20 ADAM metallopeptidase domain 20
ADRA1B adrenoceptor alpha 1B
ADRB3 adrenoceptor beta 3
AKAP5 A kinase (PRKA) anchor protein 5
AMPH amphiphysin
AMY2A amylase, alpha 2A (pancreatic)
ANKRD30B ankyrin repeat domain 30B
AP1S1 adaptor-related protein complex 1, sigma 1 subunit
AQP3 aquaporin 3 (Gill blood group)
ARF3 ADP-ribosylation factor 3
ARHGEF28 Rho guanine nucleotide exchange factor (GEF) 28
ARL5C ADP-ribosylation factor-like 5C
ARRB1 arrestin, beta 1
ASB15 ankyrin repeat and SOCS box containing 15
ASB18 ankyrin repeat and SOCS box containing 18
ATOH7 atonal homolog 7 (Drosophila)
ATP1A3 ATPase, Na+/K+ transporting, alpha 3 polypeptide
ATP1B4 ATPase, Na+/K+ transporting, beta 4 polypeptide
ATP4A ATPase, H+/K+ exchanging, alpha polypeptide
ATP6V1H ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H
ATXN8OS ATXN8 opposite strand (non-protein coding)
AVP arginine vasopressin
B3GALNT1 beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)
BASP1 brain abundant, membrane attached signal protein 1
BCL2L10 BCL2-like 10 (apoptosis facilitator)
BEX1 brain expressed, X-linked 1
BEX2 brain expressed X-linked 2
BEX5 brain expressed, X-linked 5
BFSP1 beaded filament structural protein 1, filensin
BHLHE22 basic helix-loop-helix family, member e22
BLID BH3-like motif containing, cell death inducer
BRDT bromodomain, testis-specific
BRWD1 bromodomain and WD repeat domain containing 1
BSPH1 binder of sperm protein homolog 1
BTRC beta-transducin repeat containing E3 ubiquitin protein ligase
BZRAP1 benzodiazepine receptor (peripheral) associated protein 1
C12ORF77 chromosome 12 open reading frame 77
C1ORF95 chromosome 1 open reading frame 95
C1QL3 complement component 1, q subcomponent-like 3
C20ORF173 chromosome 20 open reading frame 173
C22ORF42 chromosome 22 open reading frame 42
C3ORF49 chromosome 3 open reading frame 49
C5ORF30 chromosome 5 open reading frame 30
C9 complement component 9
CA11 carbonic anhydrase XI
CACNA1E calcium channel, voltage-dependent, R type, alpha 1E subunit
CALB2 calbindin 2
CAMK1 calcium/calmodulin-dependent protein kinase I
CAMK1D calcium/calmodulin-dependent protein kinase ID
CAMK2N1 calcium/calmodulin-dependent protein kinase II inhibitor 1
CBWD2 COBW domain containing 2
CBWD3 COBW domain containing 3
CC2D2B coiled-coil and C2 domain containing 2B
CCDC105 coiled-coil domain containing 105
CCDC144A coiled-coil domain containing 144A
CCDC144B coiled-coil domain containing 144B (pseudogene)
CCDC3 coiled-coil domain containing 3
CCDC92 coiled-coil domain containing 92
CCR6 chemokine (C-C motif) receptor 6
CDC37L1 cell division cycle 37-like 1
CDH12 cadherin 12, type 2 (N-cadherin 2)
CDH9 cadherin 9, type 2 (T1-cadherin)
CELF4 CUGBP, Elav-like family member 4
CELF5 CUGBP, Elav-like family member 5
CHRNB3 cholinergic receptor, nicotinic, beta 3 (neuronal)
CKMT1B creatine kinase, mitochondrial 1B
CLEC4G C-type lectin domain family 4, member G
CLEC4GP1 C-type lectin domain family 4, member G pseudogene 1
CLRN3 clarin 3
CMAS cytidine monophosphate N-acetylneuraminic acid synthetase
CMIP c-Maf inducing protein
CNGB1 cyclic nucleotide gated channel beta 1
CNTN3 contactin 3 (plasmacytoma associated)
CNTN5 contactin 5
CNTNAP2 contactin associated protein-like 2
COL26A1 collagen, type XXVI, alpha 1
CPLX2 complexin 2
CPNE6 copine VI (neuronal)
CRHR1 corticotropin releasing hormone receptor 1
CRHR2 corticotropin releasing hormone receptor 2
CST6 cystatin E/M
CT45A1 cancer/testis antigen family 45, member A1
CT45A5 cancer/testis antigen family 45, member A5
CYP2C18 cytochrome P450, family 2, subfamily C, polypeptide 18
CYP4X1 cytochrome P450, family 4, subfamily X, polypeptide 1
CYP4Z1 cytochrome P450, family 4, subfamily Z, polypeptide 1
DBH dopamine beta-hydroxylase (dopamine beta-monooxygenase)
DCAF8L1 DDB1 and CUL4 associated factor 8-like 1
DLGAP3 discs, large (Drosophila) homolog-associated protein 3
DMRTC1B DMRT-like family C1B
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1
DNAJB3 DnaJ (Hsp40) homolog, subfamily B, member 3
DNAJB7 DnaJ (Hsp40) homolog, subfamily B, member 7
DNAJC5G DnaJ (Hsp40) homolog, subfamily C, member 5 gamma
DNAL4 dynein, axonemal, light chain 4
DNTT DNA nucleotidylexotransferase
DRD1 dopamine receptor D1
DTNBP1 dystrobrevin binding protein 1
DYNAP dynactin associated protein
DYTN dystrotelin
ELAVL2 ELAV like neuron-specific RNA binding protein 2
ELK1 ELK1, member of ETS oncogene family
EPB41L4B erythrocyte membrane protein band 4.1 like 4B
EPHA6 EPH receptor A6
ERC2 ELKS/RAB6-interacting/CAST family member 2
FAM153A family with sequence similarity 153, member A
FAM153B family with sequence similarity 153, member B
FAM153C family with sequence similarity 153, member C, pseudogene
FAM184A family with sequence similarity 184, member A
FAM19A1 family with sequence similarity 19 (chemokine (C-C motif)-like), member A1
FAM19A2 family with sequence similarity 19 (chemokine (C-C motif)-like), member A2
FAM217A family with sequence similarity 217, member A
FAM228A family with sequence similarity 228, member A
FAM46D family with sequence similarity 46, member D
FBXL17 F-box and leucine-rich repeat protein 17
FBXL20 F-box and leucine-rich repeat protein 20
FCER2 Fc fragment of IgE, low affinity II, receptor for (CD23)
FER1L6 fer-1-like family member 6
FGF13 fibroblast growth factor 13
FNDC9 fibronectin type III domain containing 9
FRG2C FSHD region gene 2 family, member C
FSTL4 follistatin-like 4
FUT2 fucosyltransferase 2 (secretor status included)
GABRA5 gamma-aminobutyric acid (GABA) A receptor, alpha 5
GABRE gamma-aminobutyric acid (GABA) A receptor, epsilon
GALNTL5 polypeptide N-acetylgalactosaminyltransferase-like 5
GFRA4 GDNF family receptor alpha 4
GLP2R glucagon-like peptide 2 receptor
GLUD1 glutamate dehydrogenase 1
GLUD2 glutamate dehydrogenase 2
GNAQ guanine nucleotide binding protein (G protein), q polypeptide
GOLGA6L1 golgin A6 family-like 1
GOLGA6L6 golgin A6 family-like 6
GOLGA8CP golgin A8 family, member C, pseudogene
GOLGA8DP golgin A8 family, member D, pseudogene
GOLGA8EP golgin A8 family, member E, pseudogene
GP6 glycoprotein VI (platelet)
GPR101 G protein-coupled receptor 101
GPR151 G protein-coupled receptor 151
GPR22 G protein-coupled receptor 22
GPR52 G protein-coupled receptor 52
GPR6 G protein-coupled receptor 6
GPR83 G protein-coupled receptor 83
GRM1 glutamate receptor, metabotropic 1
GRM2 glutamate receptor, metabotropic 2
GUCA2B guanylate cyclase activator 2B (uroguanylin)
GUCY2EP guanylate cyclase 2E, pseudogene
H2BFWT H2B histone family, member W, testis-specific
HAUS6 HAUS augmin-like complex, subunit 6
HDGFRP3 hepatoma-derived growth factor, related protein 3
HPCAL4 hippocalcin like 4
HTR1E 5-hydroxytryptamine (serotonin) receptor 1E, G protein-coupled
HTR3A 5-hydroxytryptamine (serotonin) receptor 3A, ionotropic
ICAM5 intercellular adhesion molecule 5, telencephalin
IDS iduronate 2-sulfatase
IFITM4P interferon induced transmembrane protein 4 pseudogene
IGLL3P immunoglobulin lambda-like polypeptide 3, pseudogene
IGSF22 immunoglobulin superfamily, member 22
IL20 interleukin 20
IL31 interleukin 31
IL34 interleukin 34
INSL6 insulin-like 6
IQCJ IQ motif containing J
KCNA4 potassium channel, voltage gated shaker related subfamily A, member 4
KCNAB2 potassium channel, voltage gated subfamily A regulatory beta subunit 2
KCNC4 potassium channel, voltage gated Shaw related subfamily C, member 4
KCNG3 potassium channel, voltage gated modifier subfamily G, member 3
KCNIP4-IT1 KCNIP4 intronic transcript 1
KCNJ1 potassium channel, inwardly rectifying subfamily J, member 1
KCNK1 potassium channel, two pore domain subfamily K, member 1
KCNK2 potassium channel, two pore domain subfamily K, member 2
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1
KCNV2 potassium channel, voltage gated modifier subfamily V, member 2
KCTD4 potassium channel tetramerization domain containing 4
KGFLP1 fibroblast growth factor 7 pseudogene
KIAA1644 KIAA1644
KIF12 kinesin family member 12
KIF3A kinesin family member 3A
KIF5A kinesin family member 5A
KIF5C kinesin family member 5C
KLB klotho beta
KLF16 Kruppel-like factor 16
KLHL1 kelch-like family member 1
KLHL2 kelch-like family member 2
KLK15 kallikrein-related peptidase 15
KRT28 keratin 28, type I
KRT3 keratin 3, type II
KRT77 keratin 77, type II
KRT78 keratin 78, type II
KRT81 keratin 81, type II
KRTAP10-4 keratin associated protein 10-4
LCE1B late cornified envelope 1B
LCE1E late cornified envelope 1E
LCN8 lipocalin 8
LHFPL5 lipoma HMGIC fusion partner-like 5
LINC00114 long intergenic non-protein coding RNA 114
LINC00207 long intergenic non-protein coding RNA 207
LINC00239 long intergenic non-protein coding RNA 239
LINC01555 long intergenic non-protein coding RNA 1555
LOC145474 uncharacterized LOC145474
LOC283070
LOC284578 uncharacterized LOC284578
LOC440896 uncharacterized LOC440896
LOC644669 ankyrin repeat domain 30B pseudogene
LOC728554 THO complex 3 pseudogene
LOXHD1 lipoxygenase homology domains 1
LPA lipoprotein, Lp(a)
LPCAT4 lysophosphatidylcholine acyltransferase 4
LPPR4 lipid phosphate phosphatase-related protein type 4
LRFN5 leucine rich repeat and fibronectin type III domain containing 5
LRRC17 leucine rich repeat containing 17
LRRC19 leucine rich repeat containing 19
LRRC3B leucine rich repeat containing 3B
LRRC7 leucine rich repeat containing 7
LRTM1 leucine-rich repeats and transmembrane domains 1
MAPRE3 microtubule-associated protein, RP/EB family, member 3
MB myoglobin
MC4R melanocortin 4 receptor
MCCD1 mitochondrial coiled-coil domain 1
ME1 malic enzyme 1, NADP(+)-dependent, cytosolic
MEAF6 MYST/Esa1-associated factor 6
MEG3 maternally expressed 3 (non-protein coding)
MEIS3 Meis homeobox 3
MIAT myocardial infarction associated transcript (non-protein coding)
MKL2 MKL/myocardin-like 2
MPP7 membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)
MS4A8 membrane-spanning 4-domains, subfamily A, member 8
MT1IP metallothionein 1I, pseudogene
MTCH1 mitochondrial carrier 1
MYL2 myosin, light chain 2, regulatory, cardiac, slow
MYRIP myosin VIIA and Rab interacting protein
NCS1 neuronal calcium sensor 1
NECAB2 N-terminal EF-hand calcium binding protein 2
NKAIN3 Na+/K+ transporting ATPase interacting 3
NOTO notochord homeobox
NPAS1 neuronal PAS domain protein 1
NPHS1 nephrosis 1, congenital, Finnish type (nephrin)
NPPB natriuretic peptide B
NPTX1 neuronal pentraxin I
NPTX2 neuronal pentraxin II
NPTXR neuronal pentraxin receptor
NPY1R neuropeptide Y receptor Y1
NRXN3 neurexin 3
OGG1 8-oxoguanine DNA glycosylase
OPN4 opsin 4
OR10C1 olfactory receptor, family 10, subfamily C, member 1 (gene/pseudogene)
OR10G7 olfactory receptor, family 10, subfamily G, member 7
OR12D3 olfactory receptor, family 12, subfamily D, member 3
OR1D2 olfactory receptor, family 1, subfamily D, member 2
OR2D2 olfactory receptor, family 2, subfamily D, member 2
OR2F2 olfactory receptor, family 2, subfamily F, member 2
OR2M1P olfactory receptor, family 2, subfamily M, member 1 pseudogene
OR2T10 olfactory receptor, family 2, subfamily T, member 10
OR2T11 olfactory receptor, family 2, subfamily T, member 11 (gene/pseudogene)
OR2T5 olfactory receptor, family 2, subfamily T, member 5
OR5V1 olfactory receptor, family 5, subfamily V, member 1
OTOF otoferlin
OXGR1 oxoglutarate (alpha-ketoglutarate) receptor 1
PABPC1L2A poly(A) binding protein, cytoplasmic 1-like 2A
PACSIN1 protein kinase C and casein kinase substrate in neurons 1
PAK6 p21 protein (Cdc42/Rac)-activated kinase 6
PCDH11X protocadherin 11 X-linked
PCDH19 protocadherin 19
PDE2A phosphodiesterase 2A, cGMP-stimulated
PDYN prodynorphin
PEG3 paternally expressed 3
PKP1 plakophilin 1
PLA2G12B phospholipase A2, group XIIB
PNCK pregnancy up-regulated nonubiquitous CaM kinase
PNMA5 paraneoplastic Ma antigen family member 5
PNPLA5 patatin-like phospholipase domain containing 5
POM121L2 POM121 transmembrane nucleoporin-like 2
PP14571 uncharacterized LOC100130449
PPFIA4 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4
PPP4R4 protein phosphatase 4, regulatory subunit 4
PRB2 proline-rich protein BstNI subfamily 2
PRDM14 PR domain containing 14
PRG1 p53-responsive gene 1
PRO0611 PRO0611 protein
PROC protein C (inactivator of coagulation factors Va and VIIIa)
PRODH2 proline dehydrogenase (oxidase) 2
PRR32 proline rich 32
PSD3 pleckstrin and Sec7 domain containing 3
PSG5 pregnancy specific beta-1-glycoprotein 5
PSIP1 PC4 and SFRS1 interacting protein 1
PTER phosphotriesterase related
PTPRR protein tyrosine phosphatase, receptor type, R
PTPRT protein tyrosine phosphatase, receptor type, T
PYDC1 PYD (pyrin domain) containing 1
RAD51AP2 RAD51 associated protein 2
RAPGEF4 Rap guanine nucleotide exchange factor (GEF) 4
RAPGEFL1 Rap guanine nucleotide exchange factor (GEF)-like 1
RASA4 RAS p21 protein activator 4
RASGEF1A RasGEF domain family, member 1A
RBPMS2 RNA binding protein with multiple splicing 2
RIMBP2 RIMS binding protein 2
RNF11 ring finger protein 11
RTBDN retbindin
S100A5 S100 calcium binding protein A5
SAMD3 sterile alpha motif domain containing 3
SCN3B sodium channel, voltage gated, type III beta subunit
SDR16C5 short chain dehydrogenase/reductase family 16C, member 5
SEMA4A sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
SEPT3 septin 3
SERPINA10 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10
SFTA1P surfactant associated 1, pseudogene
SGSM2 small G protein signaling modulator 2
SH2D4B SH2 domain containing 4B
SHANK1 SH3 and multiple ankyrin repeat domains 1
SLC12A8 solute carrier family 12, member 8
SLC17A6 solute carrier family 17 (vesicular glutamate transporter), member 6
SLC17A7 solute carrier family 17 (vesicular glutamate transporter), member 7
SLC22A10 solute carrier family 22, member 10
SLC22A12 solute carrier family 22 (organic anion/urate transporter), member 12
SLC26A8 solute carrier family 26 (anion exchanger), member 8
SLC30A3 solute carrier family 30 (zinc transporter), member 3
SLC8A2 solute carrier family 8 (sodium/calcium exchanger), member 2
SLC9A6 solute carrier family 9, subfamily A (NHE6, cation proton antiporter 6), member 6
SMARCD3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3
SMIM21 small integral membrane protein 21
SNAPC5 small nuclear RNA activating complex, polypeptide 5, 19kDa
SNCG synuclein, gamma (breast cancer-specific protein 1)
SNORA37 small nucleolar RNA, H/ACA box 37
SNORA61 small nucleolar RNA, H/ACA box 61
SNORD115-13 small nucleolar RNA, C/D box 115-13
SNORD115-26 small nucleolar RNA, C/D box 115-26
SNORD115-7 small nucleolar RNA, C/D box 115-7
SNURF SNRPN upstream reading frame
SOSTDC1 sclerostin domain containing 1
SOWAHA sosondowah ankyrin repeat domain family member A
SPIDR scaffolding protein involved in DNA repair
SPRR4 small proline-rich protein 4
STX1B syntaxin 1B
SUDS3 suppressor of defective silencing 3 homolog (S. cerevisiae)
SUGT1P3 SUGT1 pseudogene 3
SUMO3 small ubiquitin-like modifier 3
SYCP3 synaptonemal complex protein 3
SYN1 synapsin I
SYN2 synapsin II
SYNGAP1 synaptic Ras GTPase activating protein 1
SYNPR synaptoporin
SYT5 synaptotagmin V
SYT7 synaptotagmin VII
SYTL1 synaptotagmin-like 1
SYTL2 synaptotagmin-like 2
TAAR9 trace amine associated receptor 9 (gene/pseudogene)
TAC3 tachykinin 3
TACR2 tachykinin receptor 2
TAS2R4 taste receptor, type 2, member 4
TBC1D26 TBC1 domain family, member 26
TBC1D3H TBC1 domain family, member 3H
TCEAL5 transcription elongation factor A (SII)-like 5
TCP10 t-complex 10
TDRD12 tudor domain containing 12
TENM2 teneurin transmembrane protein 2
TEX13B testis expressed 13B
TEX35 testis expressed 35
TGM6 transglutaminase 6
THPO thrombopoietin
THRB thyroid hormone receptor, beta
TMCO5A transmembrane and coiled-coil domains 5A
TMEM14E transmembrane protein 14E
TMEM215 transmembrane protein 215
TMPRSS12 transmembrane (C-terminal) protease, serine 12
TNNI3K TNNI3 interacting kinase
TNNT2 troponin T type 2 (cardiac)
TOPAZ1 testis and ovary specific PAZ domain containing 1
TP53I11 tumor protein p53 inducible protein 11
TPD52L3 tumor protein D52-like 3
TRIM54 tripartite motif containing 54
TRIM72 tripartite motif containing 72, E3 ubiquitin protein ligase
TRIML2 tripartite motif family-like 2
TSG1 tumor suppressor TSG1
TUBA8 tubulin, alpha 8
UCHL1 ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)
UPP2 uridine phosphorylase 2
UROC1 urocanate hydratase 1
USP26 ubiquitin specific peptidase 26
VIP vasoactive intestinal peptide
VWA5B2 von Willebrand factor A domain containing 5B2
VWA7 von Willebrand factor A domain containing 7
WFDC12 WAP four-disulfide core domain 12
WNT8A wingless-type MMTV integration site family, member 8A
YJEFN3 YjeF N-terminal domain containing 3
YWHAH tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta
ZAN zonadhesin (gene/pseudogene)
ZCCHC12 zinc finger, CCHC domain containing 12
ZCCHC17 zinc finger, CCHC domain containing 17
ZNF774 zinc finger protein 774
ZNF831 zinc finger protein 831
ZP1 zona pellucida glycoprotein 1 (sperm receptor)
ZPBP zona pellucida binding protein

low expression

Symbol Name
ARAP1 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
ARFIP1 ADP-ribosylation factor interacting protein 1
HELQ helicase, POLQ-like
HPS5 Hermansky-Pudlak syndrome 5
UFSP2 UFM1-specific peptidase 2