Brain Lower Grade Glioma_LGG_TCGA-S9-A7QZ-01A-12R-A34R-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

389 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-S9-A7QZ-01A-12R-A34R-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABCC2 ATP-binding cassette, sub-family C (CFTR/MRP), member 2
ABHD16B abhydrolase domain containing 16B
ACR acrosin
ACRBP acrosin binding protein
ACTL7B actin-like 7B
ACTR5 ARP5 actin-related protein 5 homolog (yeast)
ACTRT1 actin-related protein T1
ACY1 aminoacylase 1
ADAMTS10 ADAM metallopeptidase with thrombospondin type 1 motif, 10
ADAMTS13 ADAM metallopeptidase with thrombospondin type 1 motif, 13
ADCY6 adenylate cyclase 6
ADGRG3 adhesion G protein-coupled receptor G3
ADORA2A-AS1 ADORA2A antisense RNA 1
AGAP4 ArfGAP with GTPase domain, ankyrin repeat and PH domain 4
AKNA AT-hook transcription factor
ALG11 ALG11, alpha-1,2-mannosyltransferase
AMT aminomethyltransferase
ANGEL1 angel homolog 1 (Drosophila)
ANKS6 ankyrin repeat and sterile alpha motif domain containing 6
ANXA3 annexin A3
ANXA8 annexin A8
AP1G2 adaptor-related protein complex 1, gamma 2 subunit
ARHGAP27 Rho GTPase activating protein 27
ARL4D ADP-ribosylation factor-like 4D
ART1 ADP-ribosyltransferase 1
ASCL3 achaete-scute family bHLH transcription factor 3
ASTL astacin-like metallo-endopeptidase (M12 family)
ATCAY ataxia, cerebellar, Cayman type
ATP10A ATPase, class V, type 10A
ATP6V1B1 ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1
B4GALNT4 beta-1,4-N-acetyl-galactosaminyl transferase 4
BAHCC1 BAH domain and coiled-coil containing 1
BAIAP2L2 BAI1-associated protein 2-like 2
BPIFB6 BPI fold containing family B, member 6
BTNL9 butyrophilin-like 9
C11ORF42 chromosome 11 open reading frame 42
C12ORF50 chromosome 12 open reading frame 50
C17ORF67 chromosome 17 open reading frame 67
C17ORF74 chromosome 17 open reading frame 74
C1ORF106 chromosome 1 open reading frame 106
C1ORF220 chromosome 1 open reading frame 220
C1ORF64 chromosome 1 open reading frame 64
C1QTNF4 C1q and tumor necrosis factor related protein 4
C20ORF144 chromosome 20 open reading frame 144
C2CD4C C2 calcium-dependent domain containing 4C
C2ORF27A chromosome 2 open reading frame 27A
C2ORF27B chromosome 2 open reading frame 27B
C2ORF82 chromosome 2 open reading frame 82
C8ORF86 chromosome 8 open reading frame 86
C9ORF172 chromosome 9 open reading frame 172
CA10 carbonic anhydrase X
CACNA1A calcium channel, voltage-dependent, P/Q type, alpha 1A subunit
CAPN9 calpain 9
CASKIN1 CASK interacting protein 1
CATSPER4 cation channel, sperm associated 4
CCDC116 coiled-coil domain containing 116
CCDC154 coiled-coil domain containing 154
CCDC78 coiled-coil domain containing 78
CCDC93 coiled-coil domain containing 93
CCNI2 cyclin I family, member 2
CDH24 cadherin 24, type 2
CDHR1 cadherin-related family member 1
CEACAM20 carcinoembryonic antigen-related cell adhesion molecule 20
CELA2B chymotrypsin-like elastase family, member 2B
CHD3 chromodomain helicase DNA binding protein 3
CHRNA10 cholinergic receptor, nicotinic, alpha 10 (neuronal)
CHRNA4 cholinergic receptor, nicotinic, alpha 4 (neuronal)
COG2 component of oligomeric golgi complex 2
COL18A1-AS1 COL18A1 antisense RNA 1
COLQ collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase
CORO6 coronin 6
CPO carboxypeptidase O
CRB3 crumbs family member 3
CRIPAK cysteine-rich PAK1 inhibitor
CRISPLD2 cysteine-rich secretory protein LCCL domain containing 2
CSAD cysteine sulfinic acid decarboxylase
CSMD1 CUB and Sushi multiple domains 1
CST5 cystatin D
CTSO cathepsin O
CUL9 cullin 9
CXADRP3 coxsackie virus and adenovirus receptor pseudogene 3
CYP4F30P cytochrome P450, family 4, subfamily F, polypeptide 30, pseudogene
D2HGDH D-2-hydroxyglutarate dehydrogenase
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17
DGCR10 DiGeorge syndrome critical region gene 10 (non-protein coding)
DGCR9 DiGeorge syndrome critical region gene 9 (non-protein coding)
DKFZP434K028 uncharacterized LOC26070
DNAH1 dynein, axonemal, heavy chain 1
DNHD1 dynein heavy chain domain 1
DRICH1 aspartate-rich 1
EBF4 early B-cell factor 4
ELFN2 extracellular leucine-rich repeat and fibronectin type III domain containing 2
EPHA10 EPH receptor A10
EPS8L2 EPS8-like 2
ERICH4 glutamate-rich 4
EVI5L ecotropic viral integration site 5-like
F2 coagulation factor II (thrombin)
F8A1 coagulation factor VIII-associated 1
FAM153A family with sequence similarity 153, member A
FAM163A family with sequence similarity 163, member A
FAM186A family with sequence similarity 186, member A
FAM205A family with sequence similarity 205, member A
FASN fatty acid synthase
FBXL19 F-box and leucine-rich repeat protein 19
FDPS farnesyl diphosphate synthase
FGFBP3 fibroblast growth factor binding protein 3
FGFR4 fibroblast growth factor receptor 4
FLJ41941 uncharacterized LOC100192420
FMO6P flavin containing monooxygenase 6 pseudogene
FRAT1 frequently rearranged in advanced T-cell lymphomas 1
GAL3ST2 galactose-3-O-sulfotransferase 2
GCNT7 glucosaminyl (N-acetyl) transferase family member 7
GDF2 growth differentiation factor 2
GFRA1 GDNF family receptor alpha 1
GGT1 gamma-glutamyltransferase 1
GIT1 G protein-coupled receptor kinase interacting ArfGAP 1
GJA3 gap junction protein, alpha 3, 46kDa
GLCCI1 glucocorticoid induced 1
GLTPD2 glycolipid transfer protein domain containing 2
GNRH2 gonadotropin-releasing hormone 2
GOLGA8B golgin A8 family, member B
GP6 glycoprotein VI (platelet)
GPR25 G protein-coupled receptor 25
GPR35 G protein-coupled receptor 35
GPR45 G protein-coupled receptor 45
GRID2IP glutamate receptor, ionotropic, delta 2 (Grid2) interacting protein
GRK1 G protein-coupled receptor kinase 1
GRXCR1 glutaredoxin, cysteine rich 1
GTSE1-AS1 GTSE1 antisense RNA 1 (head to head)
GUSBP1 glucuronidase, beta pseudogene 1
GYPA glycophorin A (MNS blood group)
HCG4B HLA complex group 4B (non-protein coding)
HERC2P4 hect domain and RLD 2 pseudogene 4
HIP1R huntingtin interacting protein 1 related
HMGB3P1 high mobility group box 3 pseudogene 1
HOOK2 hook microtubule-tethering protein 2
HPX hemopexin
HSD17B7 hydroxysteroid (17-beta) dehydrogenase 7
HSD17B7P2 hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2
HSF4 heat shock transcription factor 4
HYAL1 hyaluronoglucosaminidase 1
IFNA14 interferon, alpha 14
IFNA17 interferon, alpha 17
IFNA4 interferon, alpha 4
IL13 interleukin 13
ING2 inhibitor of growth family, member 2
ING5 inhibitor of growth family, member 5
INSC inscuteable homolog (Drosophila)
INSL6 insulin-like 6
INTU inturned planar cell polarity protein
IPO5 importin 5
ITGA2B integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)
ITLN1 intelectin 1 (galactofuranose binding)
KCNIP3 Kv channel interacting protein 3, calsenilin
KHDC1L KH homology domain containing 1-like
KIAA0087 KIAA0087
KIAA0895L KIAA0895-like
KIAA1755 KIAA1755
KIAA1875 KIAA1875
KIF13A kinesin family member 13A
KLF15 Kruppel-like factor 15
KRT12 keratin 12, type I
KRT19 keratin 19, type I
KRTAP5-6 keratin associated protein 5-6
L3MBTL1 l(3)mbt-like 1 (Drosophila)
LINC00032 long intergenic non-protein coding RNA 32
LINC00167 long intergenic non-protein coding RNA 167
LINC00176 long intergenic non-protein coding RNA 176
LINC00202-1 long intergenic non-protein coding RNA 202-1
LINC00235 long intergenic non-protein coding RNA 235
LINC00304 long intergenic non-protein coding RNA 304
LINC00319 long intergenic non-protein coding RNA 319
LINC00336 long intergenic non-protein coding RNA 336
LINC00575 long intergenic non-protein coding RNA 575
LINC01548 long intergenic non-protein coding RNA 1548
LINC01590 long intergenic non-protein coding RNA 1590
LKAAEAR1 LKAAEAR motif containing 1
LOC100134368 uncharacterized LOC100134368
LOC100190986 uncharacterized LOC100190986
LOC143188 uncharacterized LOC143188
LOC153684 uncharacterized LOC153684
LOC285692 uncharacterized LOC285692
LOC285847 uncharacterized LOC285847
LOC286359 uncharacterized LOC286359
LOC391322 D-dopachrome tautomerase-like
LOC400940 uncharacterized LOC400940
LOC613037 nuclear pore complex interacting protein pseudogene
LOC642852 uncharacterized LOC642852
LOC643486
LOC646214 p21 protein (Cdc42/Rac)-activated kinase 2 pseudogene
LOC93432
LPO lactoperoxidase
LRRN4 leucine rich repeat neuronal 4
LVRN laeverin
MAGEA9B melanoma antigen family A9B
MC1R melanocortin 1 receptor (alpha melanocyte stimulating hormone receptor)
MCF2L MCF.2 cell line derived transforming sequence-like
METAP1D methionyl aminopeptidase type 1D (mitochondrial)
MGC2889 uncharacterized protein MGC2889
MICAL1 microtubule associated monooxygenase, calponin and LIM domain containing 1
MLLT4-AS1 MLLT4 antisense RNA 1 (head to head)
MLLT6 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6
MRGPRG-AS1 MRGPRG antisense RNA 1
MSLNL mesothelin-like
MSX2P1 msh homeobox 2 pseudogene 1
MT1IP metallothionein 1I, pseudogene
MTG1 mitochondrial ribosome-associated GTPase 1
MUC16 mucin 16, cell surface associated
MUC5B mucin 5B, oligomeric mucus/gel-forming
MUM1 melanoma associated antigen (mutated) 1
MYH14 myosin, heavy chain 14, non-muscle
MYH7B myosin, heavy chain 7B, cardiac muscle, beta
NEU4 sialidase 4
NKPD1 NTPase, KAP family P-loop domain containing 1
NOMO3 NODAL modulator 3
NOXA1 NADPH oxidase activator 1
NPR1 natriuretic peptide receptor 1
NR0B1 nuclear receptor subfamily 0, group B, member 1
NRG2 neuregulin 2
NUDT10 nudix (nucleoside diphosphate linked moiety X)-type motif 10
NUTM2A NUT family member 2A
NUTM2D NUT family member 2D
NXF4 nuclear RNA export factor 4 pseudogene
OIT3 oncoprotein induced transcript 3
OR10A6 olfactory receptor, family 10, subfamily A, member 6 (gene/pseudogene)
OR1D4 olfactory receptor, family 1, subfamily D, member 4 (gene/pseudogene)
OR2M3 olfactory receptor, family 2, subfamily M, member 3
OR2T10 olfactory receptor, family 2, subfamily T, member 10
OR52W1 olfactory receptor, family 52, subfamily W, member 1
OR5AU1 olfactory receptor, family 5, subfamily AU, member 1
OR8S1 olfactory receptor, family 8, subfamily S, member 1
OTOP1 otopetrin 1
PABPN1L poly(A) binding protein, nuclear 1-like (cytoplasmic)
PAH phenylalanine hydroxylase
PCDH20 protocadherin 20
PCDHGB6 protocadherin gamma subfamily B, 6
PCK1 phosphoenolpyruvate carboxykinase 1 (soluble)
PDE6C phosphodiesterase 6C, cGMP-specific, cone, alpha prime
PDZD2 PDZ domain containing 2
PDZD3 PDZ domain containing 3
PDZD4 PDZ domain containing 4
PID1 phosphotyrosine interaction domain containing 1
PIGZ phosphatidylinositol glycan anchor biosynthesis, class Z
PITX3 paired-like homeodomain 3
PKD1 polycystic kidney disease 1 (autosomal dominant)
PKDREJ polycystin (PKD) family receptor for egg jelly
PLA2G10 phospholipase A2, group X
PLA2G3 phospholipase A2, group III
PLA2G6 phospholipase A2, group VI (cytosolic, calcium-independent)
PLAC9 placenta-specific 9
PLGLB2 plasminogen-like B2
POU3F3 POU class 3 homeobox 3
PPEF2 protein phosphatase, EF-hand calcium binding domain 2
PPP1R9B protein phosphatase 1, regulatory subunit 9B
PRINS psoriasis associated non-protein coding RNA induced by stress
PRKG2 protein kinase, cGMP-dependent, type II
PROP1 PROP paired-like homeobox 1
PRR25 proline rich 25
PRSS37 protease, serine, 37
PRSS41 protease, serine, 41
PRX periaxin
PTF1A pancreas specific transcription factor, 1a
PTGDR2 prostaglandin D2 receptor 2
PTX4 pentraxin 4, long
PVRIG poliovirus receptor related immunoglobulin domain containing
PXT1 peroxisomal, testis specific 1
RAB25 RAB25, member RAS oncogene family
RAB40A RAB40A, member RAS oncogene family
RAB40AL RAB40A, member RAS oncogene family-like
RAX2 retina and anterior neural fold homeobox 2
RBP3 retinol binding protein 3, interstitial
RFPL3 ret finger protein-like 3
RGPD1 RANBP2-like and GRIP domain containing 1
RGPD8 RANBP2-like and GRIP domain containing 8
RHBDL1 rhomboid, veinlet-like 1 (Drosophila)
RIIAD1 regulatory subunit of type II PKA R-subunit (RIIa) domain containing 1
RNASE13 ribonuclease, RNase A family, 13 (non-active)
RNF151 ring finger protein 151
RNF44 ring finger protein 44
RPL13AP17 ribosomal protein L13a pseudogene 17
RPL23AP64 ribosomal protein L23a pseudogene 64
RSPO4 R-spondin 4
RTKN rhotekin
RTP5 receptor (chemosensory) transporter protein 5 (putative)
RUSC1-AS1 RUSC1 antisense RNA 1
RWDD2A RWD domain containing 2A
SCEL sciellin
SCGB1D4 secretoglobin, family 1D, member 4
SCRT2 scratch family zinc finger 2
SEPT12 septin 12
SEPT7P9 septin 7 pseudogene 9
SERPINA10 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10
SERPINB7 serpin peptidase inhibitor, clade B (ovalbumin), member 7
SHANK3 SH3 and multiple ankyrin repeat domains 3
SLAIN1 SLAIN motif family, member 1
SLC10A1 solute carrier family 10 (sodium/bile acid cotransporter), member 1
SLC1A1 solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1
SLC22A17 solute carrier family 22, member 17
SLC22A7 solute carrier family 22 (organic anion transporter), member 7
SLC26A1 solute carrier family 26 (anion exchanger), member 1
SLC2A11 solute carrier family 2 (facilitated glucose transporter), member 11
SLC34A3 solute carrier family 34 (type II sodium/phosphate cotransporter), member 3
SLC35D3 solute carrier family 35, member D3
SLC7A5P1 solute carrier family 7 (amino acid transporter light chain, L system), member 5 pseudogene 1
SLC7A5P2 solute carrier family 7 (amino acid transporter light chain, L system), member 5 pseudogene 2
SLC9A2 solute carrier family 9, subfamily A (NHE2, cation proton antiporter 2), member 2
SLC9B1 solute carrier family 9, subfamily B (NHA1, cation proton antiporter 1), member 1
SLITRK1 SLIT and NTRK-like family, member 1
SNAR-B2 small ILF3/NF90-associated RNA B2
SNHG8 small nucleolar RNA host gene 8
SNORA11E small nucleolar RNA, H/ACA box 11E
SNORA36A small nucleolar RNA, H/ACA box 36A
SNORA36B small nucleolar RNA, H/ACA box 36B
SNORA45A small nucleolar RNA, H/ACA box 45A
SNORA6 small nucleolar RNA, H/ACA box 6
SNORA67 small nucleolar RNA, H/ACA box 67
SNORA68 small nucleolar RNA, H/ACA box 68
SNORA70 small nucleolar RNA, H/ACA box 70
SNORA71E small nucleolar RNA, H/ACA box 71E
SOX8 SRY (sex determining region Y)-box 8
SP7 Sp7 transcription factor
SPACA1 sperm acrosome associated 1
SPATA9 spermatogenesis associated 9
SPEM1 spermatid maturation 1
SPIRE2 spire-type actin nucleation factor 2
SRMS src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites
ST6GALNAC1 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1
STARD5 StAR-related lipid transfer (START) domain containing 5
STARD8 StAR-related lipid transfer (START) domain containing 8
SYCE2 synaptonemal complex central element protein 2
SYNE4 spectrin repeat containing, nuclear envelope family member 4
TAF1C TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa
TAF5L TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa
TARBP1 TAR (HIV-1) RNA binding protein 1
TAS2R38 taste receptor, type 2, member 38
TBC1D26 TBC1 domain family, member 26
TBC1D29 TBC1 domain family, member 29
TBC1D32 TBC1 domain family, member 32
TBKBP1 TBK1 binding protein 1
TBX22 T-box 22
TECTA tectorin alpha
TEDDM1 transmembrane epididymal protein 1
TFAMP1 transcription factor A, mitochondrial pseudogene 1
TGFA transforming growth factor, alpha
TGM1 transglutaminase 1
TINAG tubulointerstitial nephritis antigen
TLE2 transducin-like enhancer of split 2
TLE6 transducin-like enhancer of split 6
TLR9 toll-like receptor 9
TM4SF20 transmembrane 4 L six family member 20
TMEM175 transmembrane protein 175
TMEM249 transmembrane protein 249
TMEM253 transmembrane protein 253
TNK2 tyrosine kinase, non-receptor, 2
TPPP2 tubulin polymerization-promoting protein family member 2
TREH trehalase (brush-border membrane glycoprotein)
TRO trophinin
TRPC3 transient receptor potential cation channel, subfamily C, member 3
TSC1 tuberous sclerosis 1
TSC2 tuberous sclerosis 2
TSPY1 testis specific protein, Y-linked 1
TTC36 tetratricopeptide repeat domain 36
TTLL8 tubulin tyrosine ligase-like family member 8
UCKL1-AS1 UCKL1 antisense RNA 1
UGT3A1 UDP glycosyltransferase 3 family, polypeptide A1
UMODL1-AS1 UMODL1 antisense RNA 1
UNC13D unc-13 homolog D (C. elegans)
UNC5CL unc-5 homolog C (C. elegans)-like
UPK3B uroplakin 3B
UROC1 urocanate hydratase 1
USP43 ubiquitin specific peptidase 43
UVSSA UV-stimulated scaffold protein A
VPS9D1 VPS9 domain containing 1
VSTM2B V-set and transmembrane domain containing 2B
WDR60 WD repeat domain 60
WDR88 WD repeat domain 88
WFDC10A WAP four-disulfide core domain 10A
WFDC2 WAP four-disulfide core domain 2
WSB1 WD repeat and SOCS box containing 1
XKR6 XK, Kell blood group complex subunit-related family, member 6
YJEFN3 YjeF N-terminal domain containing 3
ZBTB8B zinc finger and BTB domain containing 8B
ZC2HC1B zinc finger, C2HC-type containing 1B
ZFR2 zinc finger RNA binding protein 2
ZNF219 zinc finger protein 219
ZNF335 zinc finger protein 335
ZNF469 zinc finger protein 469
ZNF534 zinc finger protein 534

low expression

Symbol Name
ADCK2 aarF domain containing kinase 2