Brain Lower Grade Glioma_LGG_TCGA-S9-A7IY-01A-11R-A34F-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

372 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-S9-A7IY-01A-11R-A34F-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABLIM1 actin binding LIM protein 1
ACBD7 acyl-CoA binding domain containing 7
ACOT6 acyl-CoA thioesterase 6
ACOXL acyl-CoA oxidase-like
ACTL7A actin-like 7A
ACY3 aminoacylase 3
ADARB2 adenosine deaminase, RNA-specific, B2 (non-functional)
ADHFE1 alcohol dehydrogenase, iron containing, 1
AGPAT3 1-acylglycerol-3-phosphate O-acyltransferase 3
AK3 adenylate kinase 3
ALDH2 aldehyde dehydrogenase 2 family (mitochondrial)
ALDH6A1 aldehyde dehydrogenase 6 family, member A1
ANXA8L1 annexin A8-like 1
ARMC12 armadillo repeat containing 12
ARRDC5 arrestin domain containing 5
ASB15 ankyrin repeat and SOCS box containing 15
ATHL1 ATH1, acid trehalase-like 1 (yeast)
ATP9A ATPase, class II, type 9A
ATXN3L ataxin 3-like
AWAT1 acyl-CoA wax alcohol acyltransferase 1
BAALC brain and acute leukemia, cytoplasmic
BHLHA15 basic helix-loop-helix family, member a15
C10ORF113 chromosome 10 open reading frame 113
C10ORF95 chromosome 10 open reading frame 95
C12ORF74 chromosome 12 open reading frame 74
C14ORF177 chromosome 14 open reading frame 177
C16ORF86 chromosome 16 open reading frame 86
C1QTNF8 C1q and tumor necrosis factor related protein 8
C22ORF46 chromosome 22 open reading frame 46
C2ORF57 chromosome 2 open reading frame 57
C2ORF61 chromosome 2 open reading frame 61
C2ORF76 chromosome 2 open reading frame 76
C2ORF82 chromosome 2 open reading frame 82
C6ORF10 chromosome 6 open reading frame 10
C9ORF173 chromosome 9 open reading frame 173
CALCOCO2 calcium binding and coiled-coil domain 2
CALR3 calreticulin 3
CCDC105 coiled-coil domain containing 105
CCDC38 coiled-coil domain containing 38
CD99 CD99 molecule
CDR1 cerebellar degeneration-related protein 1, 34kDa
CHCHD10 coiled-coil-helix-coiled-coil-helix domain containing 10
CKB creatine kinase, brain
CLDND2 claudin domain containing 2
CLEC4F C-type lectin domain family 4, member F
CPB2 carboxypeptidase B2 (plasma)
CPE carboxypeptidase E
CRLF1 cytokine receptor-like factor 1
CST5 cystatin D
CYBRD1 cytochrome b reductase 1
CYP17A1 cytochrome P450, family 17, subfamily A, polypeptide 1
CYP4A22 cytochrome P450, family 4, subfamily A, polypeptide 22
DDI1 DNA-damage inducible 1 homolog 1 (S. cerevisiae)
DDO D-aspartate oxidase
DEFA1B defensin, alpha 1B
DEFA4 defensin, alpha 4, corticostatin
DIRC2 disrupted in renal carcinoma 2
DKK4 dickkopf WNT signaling pathway inhibitor 4
DNAI1 dynein, axonemal, intermediate chain 1
DNMBP-AS1 DNMBP antisense RNA 1
DUXA double homeobox A
EGLN3 egl-9 family hypoxia-inducible factor 3
ENHO energy homeostasis associated
EPHX1 epoxide hydrolase 1, microsomal (xenobiotic)
ESRG embryonic stem cell related (non-protein coding)
ETV4 ets variant 4
F5 coagulation factor V (proaccelerin, labile factor)
FAM107A family with sequence similarity 107, member A
FAM166A family with sequence similarity 166, member A
FAM189A2 family with sequence similarity 189, member A2
FAM205BP transmembrane protein C9orf144B pseudogene
FARS2 phenylalanyl-tRNA synthetase 2, mitochondrial
FAT3 FAT atypical cadherin 3
FDPSP2 farnesyl diphosphate synthase pseudogene 2
FIGLA folliculogenesis specific basic helix-loop-helix
FKBP6 FK506 binding protein 6, 36kDa
FOXN1 forkhead box N1
FSHR follicle stimulating hormone receptor
FTX FTX transcript, XIST regulator (non-protein coding)
GATA5 GATA binding protein 5
GDF1 growth differentiation factor 1
GFAP glial fibrillary acidic protein
GGT3P gamma-glutamyltransferase 3 pseudogene
GHDC GH3 domain containing
GLTPD2 glycolipid transfer protein domain containing 2
GPR25 G protein-coupled receptor 25
GPRC5B G protein-coupled receptor, class C, group 5, member B
GPT glutamic-pyruvate transaminase (alanine aminotransferase)
GRAPL GRB2-related adaptor protein-like
GRK1 G protein-coupled receptor kinase 1
GRTP1 growth hormone regulated TBC protein 1
GTF2A1L general transcription factor IIA, 1-like
GTF2H2B general transcription factor IIH, polypeptide 2B (pseudogene)
HCG22 HLA complex group 22
HDDC2 HD domain containing 2
HEPH hephaestin
HHLA2 HERV-H LTR-associating 2
HIGD1C HIG1 hypoxia inducible domain family, member 1C
HIST1H1A histone cluster 1, H1a
HIST1H1E histone cluster 1, H1e
HIST1H4E histone cluster 1, H4e
HIST2H2AB histone cluster 2, H2ab
HRSP12 heat-responsive protein 12
HSPA1L heat shock 70kDa protein 1-like
HSPB2 heat shock 27kDa protein 2
HSPB8 heat shock 22kDa protein 8
HVCN1 hydrogen voltage gated channel 1
IL17D interleukin 17D
INCA1 inhibitor of CDK, cyclin A1 interacting protein 1
IQCA1 IQ motif containing with AAA domain 1
IQCK IQ motif containing K
ISCA2 iron-sulfur cluster assembly 2
ITPK1 inositol-tetrakisphosphate 1-kinase
KBTBD11 kelch repeat and BTB (POZ) domain containing 11
KBTBD13 kelch repeat and BTB (POZ) domain containing 13
KIR3DL3 killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 3
KLHL33 kelch-like family member 33
KLK12 kallikrein-related peptidase 12
KRT33A keratin 33A, type I
KRT73 keratin 73, type II
KRT85 keratin 85, type II
KRTAP11-1 keratin associated protein 11-1
KRTAP2-1 keratin associated protein 2-1
KRTAP2-2 keratin associated protein 2-2
KRTAP26-1 keratin associated protein 26-1
KRTAP3-1 keratin associated protein 3-1
KRTAP4-5 keratin associated protein 4-5
KRTAP5-11 keratin associated protein 5-11
LCN12 lipocalin 12
LDHD lactate dehydrogenase D
LINC00029 long intergenic non-protein coding RNA 29
LINC00051 long intergenic non-protein coding RNA 51
LINC00173 long intergenic non-protein coding RNA 173
LINC00469 long intergenic non-protein coding RNA 469
LOC100126784 uncharacterized LOC100126784
LOC100128542
LOC100134368 uncharacterized LOC100134368
LOC285847 uncharacterized LOC285847
LOC391322 D-dopachrome tautomerase-like
LOC643923 uncharacterized LOC643923
LOC728323 uncharacterized LOC728323
LRRC30 leucine rich repeat containing 30
LRRC8A leucine rich repeat containing 8 family, member A
LYPD1 LY6/PLAUR domain containing 1
MADCAM1 mucosal vascular addressin cell adhesion molecule 1
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2
MAOA monoamine oxidase A
MEGF9 multiple EGF-like-domains 9
MFI2 antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5
MINK1 misshapen-like kinase 1
MMP21 matrix metallopeptidase 21
MRO maestro
MRVI1 murine retrovirus integration site 1 homolog
MTSS1L metastasis suppressor 1-like
MYL3 myosin, light chain 3, alkali; ventricular, skeletal, slow
MYLPF myosin light chain, phosphorylatable, fast skeletal muscle
MYOM1 myomesin 1
NDRG2 NDRG family member 2
NEU2 sialidase 2 (cytosolic sialidase)
NKAPP1 NFKB activating protein pseudogene 1
NLRP5 NLR family, pyrin domain containing 5
NOG noggin
NTRK3 neurotrophic tyrosine kinase, receptor, type 3
NUP210L nucleoporin 210kDa-like
OCM2 oncomodulin 2
OLMALINC oligodendrocyte maturation-associated long intergenic non-coding RNA
OR10G3 olfactory receptor, family 10, subfamily G, member 3
OR10G4 olfactory receptor, family 10, subfamily G, member 4
OR10Z1 olfactory receptor, family 10, subfamily Z, member 1
OR13C4 olfactory receptor, family 13, subfamily C, member 4
OR13G1 olfactory receptor, family 13, subfamily G, member 1
OR1E1 olfactory receptor, family 1, subfamily E, member 1
OR1E2 olfactory receptor, family 1, subfamily E, member 2
OR1J4 olfactory receptor, family 1, subfamily J, member 4
OR1L1 olfactory receptor, family 1, subfamily L, member 1
OR1L6 olfactory receptor, family 1, subfamily L, member 6
OR2A14 olfactory receptor, family 2, subfamily A, member 14
OR2A2 olfactory receptor, family 2, subfamily A, member 2
OR2G2 olfactory receptor, family 2, subfamily G, member 2
OR2J3 olfactory receptor, family 2, subfamily J, member 3
OR2T3 olfactory receptor, family 2, subfamily T, member 3
OR2T5 olfactory receptor, family 2, subfamily T, member 5
OR3A1 olfactory receptor, family 3, subfamily A, member 1
OR3A3 olfactory receptor, family 3, subfamily A, member 3
OR3A4P olfactory receptor, family 3, subfamily A, member 4 pseudogene
OR4L1 olfactory receptor, family 4, subfamily L, member 1
OR4Q3 olfactory receptor, family 4, subfamily Q, member 3
OR51G2 olfactory receptor, family 51, subfamily G, member 2
OR52B2 olfactory receptor, family 52, subfamily B, member 2
OR52E4 olfactory receptor, family 52, subfamily E, member 4
OR5C1 olfactory receptor, family 5, subfamily C, member 1
OR5H2 olfactory receptor, family 5, subfamily H, member 2
OR5K4 olfactory receptor, family 5, subfamily K, member 4
OR5V1 olfactory receptor, family 5, subfamily V, member 1
OR6K3 olfactory receptor, family 6, subfamily K, member 3
OR6V1 olfactory receptor, family 6, subfamily V, member 1
OR8B2 olfactory receptor, family 8, subfamily B, member 2
OTUD6A OTU deubiquitinase 6A
PAPLN papilin, proteoglycan-like sulfated glycoprotein
PARD3 par-3 family cell polarity regulator
PATE4 prostate and testis expressed 4
PBXIP1 pre-B-cell leukemia homeobox interacting protein 1
PCDHA7 protocadherin alpha 7
PCDHGA10 protocadherin gamma subfamily A, 10
PCDHGA5 protocadherin gamma subfamily A, 5
PCDHGB7 protocadherin gamma subfamily B, 7
PCK2 phosphoenolpyruvate carboxykinase 2 (mitochondrial)
PCSK1N proprotein convertase subtilisin/kexin type 1 inhibitor
PGLYRP2 peptidoglycan recognition protein 2
PHYHD1 phytanoyl-CoA dioxygenase domain containing 1
PLA2G2C phospholipase A2, group IIC
PLEKHB1 pleckstrin homology domain containing, family B (evectins) member 1
PLIN1 perilipin 1
POC1B POC1 centriolar protein B
POM121L1P POM121 transmembrane nucleoporin-like 1, pseudogene
POM121L4P POM121 transmembrane nucleoporin-like 4 pseudogene
POM121L9P POM121 transmembrane nucleoporin-like 9, pseudogene
POTEB POTE ankyrin domain family, member B
PPP1R2P9 protein phosphatase 1, regulatory (inhibitor) subunit 2 pseudogene 9
PRAMEF16 PRAME family member 16
PRDM9 PR domain containing 9
PRKCA protein kinase C, alpha
PRLHR prolactin releasing hormone receptor
PROCA1 protein interacting with cyclin A1
PROL1 proline rich, lacrimal 1
PRSS45 protease, serine, 45
PTCHD3 patched domain containing 3
PTH1R parathyroid hormone 1 receptor
PTPRVP protein tyrosine phosphatase, receptor type, V, pseudogene
PTTG2 pituitary tumor-transforming 2
PYCR2 pyrroline-5-carboxylate reductase family, member 2
RAB10 RAB10, member RAS oncogene family
RAB41 RAB41, member RAS oncogene family
RASL12 RAS-like, family 12
REXO1L1P REX1, RNA exonuclease 1 homolog (S. cerevisiae)-like 1, pseudogene
RGS20 regulator of G-protein signaling 20
RMRP RNA component of mitochondrial RNA processing endoribonuclease
RNASE13 ribonuclease, RNase A family, 13 (non-active)
RNASE7 ribonuclease, RNase A family, 7
RNF151 ring finger protein 151
RNF19A ring finger protein 19A, RBR E3 ubiquitin protein ligase
RNU4ATAC RNA, U4atac small nuclear (U12-dependent splicing)
RNU6ATAC RNA, U6atac small nuclear (U12-dependent splicing)
RPL10L ribosomal protein L10-like
RPPH1 ribonuclease P RNA component H1
SCARNA10 small Cajal body-specific RNA 10
SCARNA11 small Cajal body-specific RNA 11
SCARNA12 small Cajal body-specific RNA 12
SCARNA17 small Cajal body-specific RNA 17
SCARNA2 small Cajal body-specific RNA 2
SCARNA21 small Cajal body-specific RNA 21
SCARNA3 small Cajal body-specific RNA 3
SCARNA5 small Cajal body-specific RNA 5
SCARNA6 small Cajal body-specific RNA 6
SCARNA7 small Cajal body-specific RNA 7
SCARNA8 small Cajal body-specific RNA 8
SDS serine dehydratase
SELL selectin L
SERPINA10 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10
SERPINI2 serpin peptidase inhibitor, clade I (pancpin), member 2
SFTPD surfactant protein D
SH2D6 SH2 domain containing 6
SIAE sialic acid acetylesterase
SLC16A11 solute carrier family 16, member 11
SLC18B1 solute carrier family 18, subfamily B, member 1
SLC22A11 solute carrier family 22 (organic anion/urate transporter), member 11
SLC23A3 solute carrier family 23, member 3
SLC25A18 solute carrier family 25 (glutamate carrier), member 18
SLC25A20 solute carrier family 25 (carnitine/acylcarnitine translocase), member 20
SLC39A11 solute carrier family 39, member 11
SLC51B solute carrier family 51, beta subunit
SLC6A12 solute carrier family 6 (neurotransmitter transporter), member 12
SNORA10 small nucleolar RNA, H/ACA box 10
SNORA11 small nucleolar RNA, H/ACA box 11
SNORA11B small nucleolar RNA, H/ACA box 11B
SNORA11D small nucleolar RNA, H/ACA box 11D
SNORA12 small nucleolar RNA, H/ACA box 12
SNORA14B small nucleolar RNA, H/ACA box 14B
SNORA15 small nucleolar RNA, H/ACA box 15
SNORA16A small nucleolar RNA, H/ACA box 16A
SNORA21 small nucleolar RNA, H/ACA box 21
SNORA23 small nucleolar RNA, H/ACA box 23
SNORA26 small nucleolar RNA, H/ACA box 26
SNORA27 small nucleolar RNA, H/ACA box 27
SNORA2A small nucleolar RNA, H/ACA box 2A
SNORA31 small nucleolar RNA, H/ACA box 31
SNORA34 small nucleolar RNA, H/ACA box 34
SNORA38 small nucleolar RNA, H/ACA box 38
SNORA38B small nucleolar RNA, H/ACA box 38B
SNORA45B small nucleolar RNA, H/ACA box 45B
SNORA46 small nucleolar RNA, H/ACA box 46
SNORA47 small nucleolar RNA, H/ACA box 47
SNORA48 small nucleolar RNA, H/ACA box 48
SNORA49 small nucleolar RNA, H/ACA box 49
SNORA52 small nucleolar RNA, H/ACA box 52
SNORA54 small nucleolar RNA, H/ACA box 54
SNORA55 small nucleolar RNA, H/ACA box 55
SNORA57 small nucleolar RNA, H/ACA box 57
SNORA5A small nucleolar RNA, H/ACA box 5A
SNORA5C small nucleolar RNA, H/ACA box 5C
SNORA6 small nucleolar RNA, H/ACA box 6
SNORA61 small nucleolar RNA, H/ACA box 61
SNORA63 small nucleolar RNA, H/ACA box 63
SNORA64 small nucleolar RNA, H/ACA box 64
SNORA67 small nucleolar RNA, H/ACA box 67
SNORA71A small nucleolar RNA, H/ACA box 71A
SNORA71B small nucleolar RNA, H/ACA box 71B
SNORA71C small nucleolar RNA, H/ACA box 71C
SNORA71D small nucleolar RNA, H/ACA box 71D
SNORA72 small nucleolar RNA, H/ACA box 72
SNORA74B small nucleolar RNA, H/ACA box 74B
SNORA75 small nucleolar RNA, H/ACA box 75
SNORA76A small nucleolar RNA, H/ACA box 76A
SNORA76C small nucleolar RNA, H/ACA box 76C
SNORA80A small nucleolar RNA, H/ACA box 80A
SNORA81 small nucleolar RNA, H/ACA box 81
SNORA84 small nucleolar RNA, H/ACA box 84
SNORA9 small nucleolar RNA, H/ACA box 9
SNORD10 small nucleolar RNA, C/D box 10
SNORD15A small nucleolar RNA, C/D box 15A
SNORD15B small nucleolar RNA, C/D box 15B
SNORD17 small nucleolar RNA, C/D box 17
SNORD22 small nucleolar RNA, C/D box 22
SNORD8 small nucleolar RNA, C/D box 8
SNORD89 small nucleolar RNA, C/D box 89
SNORD94 small nucleolar RNA, C/D box 94
SNORD97 small nucleolar RNA, C/D box 97
SPACA5 sperm acrosome associated 5
SPARC secreted protein, acidic, cysteine-rich (osteonectin)
SPATA19 spermatogenesis associated 19
SPATA22 spermatogenesis associated 22
SPDYC speedy/RINGO cell cycle regulator family member C
SPR sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)
SREBF1 sterol regulatory element binding transcription factor 1
SSPN sarcospan
STARD3 StAR-related lipid transfer (START) domain containing 3
STOM stomatin
SULT1C4 sulfotransferase family, cytosolic, 1C, member 4
SYS1 Sys1 golgi trafficking protein
TAAR9 trace amine associated receptor 9 (gene/pseudogene)
TAS2R42 taste receptor, type 2, member 42
TERC telomerase RNA component
TEX36 testis expressed 36
TFE3 transcription factor binding to IGHM enhancer 3
TGFBR3 transforming growth factor, beta receptor III
TK2 thymidine kinase 2, mitochondrial
TMEM14E transmembrane protein 14E
TMEM170A transmembrane protein 170A
TMEM216 transmembrane protein 216
TMEM88B transmembrane protein 88B
TMPRSS5 transmembrane protease, serine 5
TNS2 tensin 2
TPD52L1 tumor protein D52-like 1
TPP1 tripeptidyl peptidase I
TPPP2 tubulin polymerization-promoting protein family member 2
TRIM8 tripartite motif containing 8
TSLP thymic stromal lymphopoietin
TST thiosulfate sulfurtransferase (rhodanese)
TTTY5 testis-specific transcript, Y-linked 5 (non-protein coding)
UGT1A7 UDP glucuronosyltransferase 1 family, polypeptide A7
UGT2B10 UDP glucuronosyltransferase 2 family, polypeptide B10
UGT3A1 UDP glycosyltransferase 3 family, polypeptide A1
USH1C Usher syndrome 1C (autosomal recessive, severe)
USP50 ubiquitin specific peptidase 50
VAMP4 vesicle-associated membrane protein 4
VSX1 visual system homeobox 1
WDR61 WD repeat domain 61
ZAN zonadhesin (gene/pseudogene)
ZFYVE21 zinc finger, FYVE domain containing 21
ZNF385A zinc finger protein 385A

low expression

Symbol Name
TYW3 tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)
UTP11L UTP11-like, U3 small nucleolar ribonucleoprotein (yeast)