Brain Lower Grade Glioma_LGG_TCGA-S9-A7IX-01A-12R-A34F-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

467 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-S9-A7IX-01A-12R-A34F-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
A2M alpha-2-macroglobulin
AACSP1 acetoacetyl-CoA synthetase pseudogene 1
ACHE acetylcholinesterase (Yt blood group)
ACOT12 acyl-CoA thioesterase 12
ACTR3B ARP3 actin-related protein 3 homolog B (yeast)
ACVR1 activin A receptor, type I
ACVR1C activin A receptor, type IC
ADAD2 adenosine deaminase domain containing 2
ADAM19 ADAM metallopeptidase domain 19
ADARB1 adenosine deaminase, RNA-specific, B1
ADCK2 aarF domain containing kinase 2
ADCY10 adenylate cyclase 10 (soluble)
ADGRB2 adhesion G protein-coupled receptor B2
ADGRE5 adhesion G protein-coupled receptor E5
ADGRG5 adhesion G protein-coupled receptor G5
ADRA1B adrenoceptor alpha 1B
AFAP1L1 actin filament associated protein 1-like 1
ALDH1L1 aldehyde dehydrogenase 1 family, member L1
ANGPTL6 angiopoietin-like 6
ANXA11 annexin A11
ANXA5 annexin A5
APCDD1L adenomatosis polyposis coli down-regulated 1-like
APMAP adipocyte plasma membrane associated protein
AQP2 aquaporin 2 (collecting duct)
AQP3 aquaporin 3 (Gill blood group)
ARG1 arginase 1
ARHGAP36 Rho GTPase activating protein 36
ARHGEF28 Rho guanine nucleotide exchange factor (GEF) 28
ARHGEF3 Rho guanine nucleotide exchange factor (GEF) 3
ARSD arylsulfatase D
ARSE arylsulfatase E (chondrodysplasia punctata 1)
ASIC5 acid sensing (proton gated) ion channel family member 5
ATOH7 atonal homolog 7 (Drosophila)
ATP1B2 ATPase, Na+/K+ transporting, beta 2 polypeptide
ATP1B4 ATPase, Na+/K+ transporting, beta 4 polypeptide
B3GNT4 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4
BANK1 B-cell scaffold protein with ankyrin repeats 1
BCAS4 breast carcinoma amplified sequence 4
BDNF brain-derived neurotrophic factor
BGN biglycan
BLNK B-cell linker
C11ORF16 chromosome 11 open reading frame 16
C11ORF21 chromosome 11 open reading frame 21
C12ORF77 chromosome 12 open reading frame 77
C14ORF169 chromosome 14 open reading frame 169
C1ORF100 chromosome 1 open reading frame 100
C1QTNF9B C1q and tumor necrosis factor related protein 9B
C20ORF173 chromosome 20 open reading frame 173
C2ORF15 chromosome 2 open reading frame 15
C5AR2 complement component 5a receptor 2
C5ORF60 chromosome 5 open reading frame 60
C6ORF15 chromosome 6 open reading frame 15
C9ORF16 chromosome 9 open reading frame 16
C9ORF3 chromosome 9 open reading frame 3
CABP4 calcium binding protein 4
CALML6 calmodulin-like 6
CALY calcyon neuron-specific vesicular protein
CAMK1 calcium/calmodulin-dependent protein kinase I
CAMK2B calcium/calmodulin-dependent protein kinase II beta
CCDC27 coiled-coil domain containing 27
CCDC28A coiled-coil domain containing 28A
CCDC3 coiled-coil domain containing 3
CCL11 chemokine (C-C motif) ligand 11
CCNJL cyclin J-like
CD5 CD5 molecule
CDC42EP3 CDC42 effector protein (Rho GTPase binding) 3
CDCP2 CUB domain containing protein 2
CDH9 cadherin 9, type 2 (T1-cadherin)
CEP19 centrosomal protein 19kDa
CFC1B cripto, FRL-1, cryptic family 1B
CFHR4 complement factor H-related 4
CGB5 chorionic gonadotropin, beta polypeptide 5
CGB8 chorionic gonadotropin, beta polypeptide 8
CHGB chromogranin B
CHPF2 chondroitin polymerizing factor 2
CHST12 carbohydrate (chondroitin 4) sulfotransferase 12
CHST13 carbohydrate (chondroitin 4) sulfotransferase 13
CHSY3 chondroitin sulfate synthase 3
CLEC17A C-type lectin domain family 17, member A
CLEC18A C-type lectin domain family 18, member A
CLEC18C C-type lectin domain family 18, member C
CLEC4C C-type lectin domain family 4, member C
CLEC4G C-type lectin domain family 4, member G
CLEC5A C-type lectin domain family 5, member A
CLECL1 C-type lectin-like 1
CLPS colipase, pancreatic
CMYA5 cardiomyopathy associated 5
CNIH2 cornichon family AMPA receptor auxiliary protein 2
CPED1 cadherin-like and PC-esterase domain containing 1
CRHBP corticotropin releasing hormone binding protein
CRISP1 cysteine-rich secretory protein 1
CST6 cystatin E/M
CTAG2 cancer/testis antigen 2
CTF1 cardiotrophin 1
CTH cystathionine gamma-lyase
CUL7 cullin 7
CXORF40A chromosome X open reading frame 40A
CYP17A1 cytochrome P450, family 17, subfamily A, polypeptide 1
CYP26C1 cytochrome P450, family 26, subfamily C, polypeptide 1
CYP2S1 cytochrome P450, family 2, subfamily S, polypeptide 1
DBIL5P diazepam binding inhibitor-like 5, pseudogene
DIRAS3 DIRAS family, GTP-binding RAS-like 3
DLC1 DLC1 Rho GTPase activating protein
DMRTA1 DMRT-like family A1
DMRTA2 DMRT-like family A2
DNM1P46 dynamin 1 pseudogene 46
ECHDC2 enoyl CoA hydratase domain containing 2
ECM1 extracellular matrix protein 1
EFEMP2 EGF containing fibulin-like extracellular matrix protein 2
ELOVL2 ELOVL fatty acid elongase 2
EPHA7 EPH receptor A7
EPHX3 epoxide hydrolase 3
ERICH6 glutamate-rich 6
ERMAP erythroblast membrane-associated protein (Scianna blood group)
ERN2 endoplasmic reticulum to nucleus signaling 2
ESPNL espin-like
ESYT3 extended synaptotagmin-like protein 3
EVC Ellis van Creveld protein
EVC2 Ellis van Creveld syndrome 2
EXTL3 exostosin-like glycosyltransferase 3
F8A1 coagulation factor VIII-associated 1
FABP2 fatty acid binding protein 2, intestinal
FABP3 fatty acid binding protein 3, muscle and heart
FAM110C family with sequence similarity 110, member C
FAM117A family with sequence similarity 117, member A
FAM153A family with sequence similarity 153, member A
FAM184A family with sequence similarity 184, member A
FAM19A3 family with sequence similarity 19 (chemokine (C-C motif)-like), member A3
FAM224B family with sequence similarity 224, member B (non-protein coding)
FAM50B family with sequence similarity 50, member B
FAM90A1 family with sequence similarity 90, member A1
FANCD2OS FANCD2 opposite strand
FBXO22-AS1 FBXO22 antisense RNA 1
FBXO39 F-box protein 39
FBXO4 F-box protein 4
FCER2 Fc fragment of IgE, low affinity II, receptor for (CD23)
FER1L5 fer-1-like family member 5
FGF1 fibroblast growth factor 1 (acidic)
FHL2 four and a half LIM domains 2
FKBP1A FK506 binding protein 1A, 12kDa
FKBP1AP1 FK506 binding protein 1A, 12kDa pseudogene 1
FMNL1 formin-like 1
FNDC9 fibronectin type III domain containing 9
FSCB fibrous sheath CABYR binding protein
FSIP1 fibrous sheath interacting protein 1
FURIN furin (paired basic amino acid cleaving enzyme)
FXYD3 FXYD domain containing ion transport regulator 3
FZD6 frizzled class receptor 6
G0S2 G0/G1 switch 2
GAL galanin/GMAP prepropeptide
GALNT8 polypeptide N-acetylgalactosaminyltransferase 8
GAS1 growth arrest-specific 1
GBP6 guanylate binding protein family, member 6
GDF2 growth differentiation factor 2
GEMIN8P4 gem (nuclear organelle) associated protein 8 pseudogene 4
GJD3 gap junction protein, delta 3, 31.9kDa
GNLY granulysin
GOLGA8CP golgin A8 family, member C, pseudogene
GOLGA8DP golgin A8 family, member D, pseudogene
GOLGA8EP golgin A8 family, member E, pseudogene
GPR152 G protein-coupled receptor 152
GPR25 G protein-coupled receptor 25
GPR83 G protein-coupled receptor 83
GRB10 growth factor receptor-bound protein 10
GRIK1 glutamate receptor, ionotropic, kainate 1
GRK1 G protein-coupled receptor kinase 1
GRM2 glutamate receptor, metabotropic 2
GRM7 glutamate receptor, metabotropic 7
GSAP gamma-secretase activating protein
GSDMA gasdermin A
GSDMD gasdermin D
HAAO 3-hydroxyanthranilate 3,4-dioxygenase
HAVCR1 hepatitis A virus cellular receptor 1
HEBP2 heme binding protein 2
HLA-DQB1 major histocompatibility complex, class II, DQ beta 1
HNF4G hepatocyte nuclear factor 4, gamma
HOXB2 homeobox B2
HPCA hippocalcin
HTR3A 5-hydroxytryptamine (serotonin) receptor 3A, ionotropic
HYKK hydroxylysine kinase
ICAM5 intercellular adhesion molecule 5, telencephalin
IFNA5 interferon, alpha 5
IFNA8 interferon, alpha 8
IFNE interferon, epsilon
IGFL1 IGF-like family member 1
IGSF10 immunoglobulin superfamily, member 10
IL17RC interleukin 17 receptor C
IL26 interleukin 26
IL27RA interleukin 27 receptor, alpha
IL34 interleukin 34
IL7 interleukin 7
ITGAV integrin, alpha V
JAG1 jagged 1
KANSL3 KAT8 regulatory NSL complex subunit 3
KCNA4 potassium channel, voltage gated shaker related subfamily A, member 4
KCNJ1 potassium channel, inwardly rectifying subfamily J, member 1
KCNK1 potassium channel, two pore domain subfamily K, member 1
KCNK5 potassium channel, two pore domain subfamily K, member 5
KCNU1 potassium channel, subfamily U, member 1
KCTD4 potassium channel tetramerization domain containing 4
KHDC1 KH homology domain containing 1
KIAA1211L KIAA1211-like
KIAA1324 KIAA1324
KLF16 Kruppel-like factor 16
KLHL2 kelch-like family member 2
KRT2 keratin 2, type II
KRTAP19-8 keratin associated protein 19-8
LAMA2 laminin, alpha 2
LILRA1 leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 1
LINC01554 long intergenic non-protein coding RNA 1554
LINC01555 long intergenic non-protein coding RNA 1555
LIPC lipase, hepatic
LIPG lipase, endothelial
LOC100129034 uncharacterized LOC100129034
LOC284578 uncharacterized LOC284578
LOC285627 uncharacterized LOC285627
LOC645752 golgin A6 family, member A pseudogene
LPIN2 lipin 2
LPPR4 lipid phosphate phosphatase-related protein type 4
LRMP lymphoid-restricted membrane protein
LRP1 low density lipoprotein receptor-related protein 1
LRPAP1 low density lipoprotein receptor-related protein associated protein 1
LRRC69 leucine rich repeat containing 69
LRRC75A leucine rich repeat containing 75A
LRRK1 leucine-rich repeat kinase 1
LRRN3 leucine rich repeat neuronal 3
LRTM2 leucine-rich repeats and transmembrane domains 2
LRWD1 leucine-rich repeats and WD repeat domain containing 1
LTBP1 latent transforming growth factor beta binding protein 1
LXN latexin
LY6E lymphocyte antigen 6 complex, locus E
LY6G6D lymphocyte antigen 6 complex, locus G6D
LYPD6B LY6/PLAUR domain containing 6B
MAEL maelstrom spermatogenic transposon silencer
MAP1LC3A microtubule-associated protein 1 light chain 3 alpha
MAP3K7CL MAP3K7 C-terminal like
MAPRE3 microtubule-associated protein, RP/EB family, member 3
MC3R melanocortin 3 receptor
MECOM MDS1 and EVI1 complex locus
MEIS1 Meis homeobox 1
MEIS3P1 Meis homeobox 3 pseudogene 1
MEOX2 mesenchyme homeobox 2
METTL24 methyltransferase like 24
MGARP mitochondria-localized glutamic acid-rich protein
MGAT4B mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme B
MICA MHC class I polypeptide-related sequence A
MIR7-3HG MIR7-3 host gene
MMD monocyte to macrophage differentiation-associated
MOB3C MOB kinase activator 3C
MOGAT1 monoacylglycerol O-acyltransferase 1
MORC1 MORC family CW-type zinc finger 1
MPPED2 metallophosphoesterase domain containing 2
MRC2 mannose receptor, C type 2
MT1A metallothionein 1A
MT1L metallothionein 1L (gene/pseudogene)
MUC15 mucin 15, cell surface associated
MYH8 myosin, heavy chain 8, skeletal muscle, perinatal
MYLK3 myosin light chain kinase 3
NAALADL1 N-acetylated alpha-linked acidic dipeptidase-like 1
NATD1 N-acetyltransferase domain containing 1
NCF1 neutrophil cytosolic factor 1
NCF1C neutrophil cytosolic factor 1C pseudogene
NEK6 NIMA-related kinase 6
NEUROD2 neuronal differentiation 2
NLRP7 NLR family, pyrin domain containing 7
NPNT nephronectin
NPS neuropeptide S
NPTX2 neuronal pentraxin II
NPTXR neuronal pentraxin receptor
NPW neuropeptide W
NPY2R neuropeptide Y receptor Y2
NR0B2 nuclear receptor subfamily 0, group B, member 2
NR2E1 nuclear receptor subfamily 2, group E, member 1
NRADDP neurotrophin receptor associated death domain, pseudogene
NRN1 neuritin 1
NSUN7 NOP2/Sun domain family, member 7
NUMBL numb homolog (Drosophila)-like
OCM2 oncomodulin 2
OLFM1 olfactomedin 1
OPLAH 5-oxoprolinase (ATP-hydrolysing)
OR10AD1 olfactory receptor, family 10, subfamily AD, member 1
OR1L1 olfactory receptor, family 1, subfamily L, member 1
OR1N2 olfactory receptor, family 1, subfamily N, member 2
OR2AE1 olfactory receptor, family 2, subfamily AE, member 1
OR2AG1 olfactory receptor, family 2, subfamily AG, member 1 (gene/pseudogene)
OR51B4 olfactory receptor, family 51, subfamily B, member 4
OR52K2 olfactory receptor, family 52, subfamily K, member 2
OR5B12 olfactory receptor, family 5, subfamily B, member 12
ORAI2 ORAI calcium release-activated calcium modulator 2
OSBPL10 oxysterol binding protein-like 10
OXER1 oxoeicosanoid (OXE) receptor 1
P2RX2 purinergic receptor P2X, ligand gated ion channel, 2
P2RY1 purinergic receptor P2Y, G-protein coupled, 1
P3H2 prolyl 3-hydroxylase 2
PADI1 peptidyl arginine deiminase, type I
PCDHB11 protocadherin beta 11
PCDHB12 protocadherin beta 12
PDGFA platelet-derived growth factor alpha polypeptide
PDGFB platelet-derived growth factor beta polypeptide
PDYN prodynorphin
PDZD7 PDZ domain containing 7
PENK proenkephalin
PFN3 profilin 3
PGPEP1 pyroglutamyl-peptidase I
PHOX2A paired-like homeobox 2a
PIWIL4 piwi-like RNA-mediated gene silencing 4
PLA2G4D phospholipase A2, group IVD (cytosolic)
PLAC8 placenta-specific 8
PLD3 phospholipase D family, member 3
PLEK2 pleckstrin 2
PLEKHG1 pleckstrin homology domain containing, family G (with RhoGef domain) member 1
PLS3 plastin 3
PLSCR2 phospholipid scramblase 2
PMCH pro-melanin-concentrating hormone
PMEPA1 prostate transmembrane protein, androgen induced 1
PPIAL4G peptidylprolyl isomerase A (cyclophilin A)-like 4G
PPM1E protein phosphatase, Mg2+/Mn2+ dependent, 1E
PPM1M protein phosphatase, Mg2+/Mn2+ dependent, 1M
PRAM1 PML-RARA regulated adaptor molecule 1
PRDM7 PR domain containing 7
PRICKLE3 prickle homolog 3 (Drosophila)
PRR32 proline rich 32
PRR5-ARHGAP8 PRR5-ARHGAP8 readthrough
PRR7 proline rich 7 (synaptic)
PRRG2 proline rich Gla (G-carboxyglutamic acid) 2
PRSS33 protease, serine, 33
PSD4 pleckstrin and Sec7 domain containing 4
PSG3 pregnancy specific beta-1-glycoprotein 3
PSORS1C1 psoriasis susceptibility 1 candidate 1
PTDSS1 phosphatidylserine synthase 1
PTER phosphotriesterase related
PTH2R parathyroid hormone 2 receptor
PVR poliovirus receptor
PXDNL peroxidasin-like
R3HDML R3H domain containing-like
RAB3D RAB3D, member RAS oncogene family
RARB retinoic acid receptor, beta
RASAL1 RAS protein activator like 1 (GAP1 like)
RASGRP1 RAS guanyl releasing protein 1 (calcium and DAG-regulated)
RAX2 retina and anterior neural fold homeobox 2
RBM20 RNA binding motif protein 20
RBM44 RNA binding motif protein 44
RBP1 retinol binding protein 1, cellular
RBPMS RNA binding protein with multiple splicing
RBPMS2 RNA binding protein with multiple splicing 2
RESP18 regulated endocrine-specific protein 18
RFX8 RFX family member 8, lacking RFX DNA binding domain
RHBDD2 rhomboid domain containing 2
RHOD ras homolog family member D
RILPL2 Rab interacting lysosomal protein-like 2
RIMBP2 RIMS binding protein 2
RIN1 Ras and Rab interactor 1
RNF128 ring finger protein 128, E3 ubiquitin protein ligase
RNF135 ring finger protein 135
RPS6KA4 ribosomal protein S6 kinase, 90kDa, polypeptide 4
RTL1 retrotransposon-like 1
SAMD3 sterile alpha motif domain containing 3
SBK2 SH3 domain binding kinase family, member 2
SEC14L1 SEC14-like 1 (S. cerevisiae)
SELV selenoprotein V
SERAC1 serine active site containing 1
SGK223 homolog of rat pragma of Rnd2
SGPP2 sphingosine-1-phosphate phosphatase 2
SH2D4A SH2 domain containing 4A
SH2D7 SH2 domain containing 7
SHROOM3 shroom family member 3
SLC10A4 solute carrier family 10, member 4
SLC12A8 solute carrier family 12, member 8
SLC13A5 solute carrier family 13 (sodium-dependent citrate transporter), member 5
SLC17A1 solute carrier family 17 (organic anion transporter), member 1
SLC25A24 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24
SLC25A31 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31
SLC27A2 solute carrier family 27 (fatty acid transporter), member 2
SLC2A10 solute carrier family 2 (facilitated glucose transporter), member 10
SLC30A3 solute carrier family 30 (zinc transporter), member 3
SLC47A1 solute carrier family 47 (multidrug and toxin extrusion), member 1
SLC4A3 solute carrier family 4 (anion exchanger), member 3
SLC8A2 solute carrier family 8 (sodium/calcium exchanger), member 2
SMAGP small cell adhesion glycoprotein
SNORA24 small nucleolar RNA, H/ACA box 24
SNORA44 small nucleolar RNA, H/ACA box 44
SPAG11B sperm associated antigen 11B
SPANXA2 SPANX family, member A2
SPANXN3 SPANX family, member N3
SPATA31A6 SPATA31 subfamily A, member 6
SPATA31C1 SPATA31 subfamily C, member 1
SPRY4 sprouty homolog 4 (Drosophila)
SRY sex determining region Y
SSFA2 sperm specific antigen 2
SSH3 slingshot protein phosphatase 3
SSUH2 ssu-2 homolog (C. elegans)
STAC SH3 and cysteine rich domain
STAG3L3 stromal antigen 3-like 3 (pseudogene)
STK32C serine/threonine kinase 32C
STRIP2 striatin interacting protein 2
SUSD3 sushi domain containing 3
SUSD4 sushi domain containing 4
SWAP70 SWAP switching B-cell complex 70kDa subunit
SYNGR4 synaptogyrin 4
TAAR6 trace amine associated receptor 6
TAL1 T-cell acute lymphocytic leukemia 1
TBATA thymus, brain and testes associated
TCP10 t-complex 10
TCP10L2 t-complex 10-like 2
TEKT3 tektin 3
TFCP2L1 transcription factor CP2-like 1
TGM3 transglutaminase 3
THBS4 thrombospondin 4
THEM5 thioesterase superfamily member 5
THNSL2 threonine synthase-like 2 (S. cerevisiae)
THOC3 THO complex 3
TICAM2 toll-like receptor adaptor molecule 2
TIFA TRAF-interacting protein with forkhead-associated domain
TIGD4 tigger transposable element derived 4
TMEM154 transmembrane protein 154
TMEM156 transmembrane protein 156
TMEM159 transmembrane protein 159
TMEM215 transmembrane protein 215
TMEM35 transmembrane protein 35
TMEM61 transmembrane protein 61
TMIGD1 transmembrane and immunoglobulin domain containing 1
TNFAIP6 tumor necrosis factor, alpha-induced protein 6
TNFRSF11B tumor necrosis factor receptor superfamily, member 11b
TNN tenascin N
TNNT2 troponin T type 2 (cardiac)
TNXB tenascin XB
TP73-AS1 TP73 antisense RNA 1
TRIM54 tripartite motif containing 54
TRIM6 tripartite motif containing 6
TRIM61 tripartite motif containing 61
TSG1 tumor suppressor TSG1
TSPAN13 tetraspanin 13
TSPAN16 tetraspanin 16
TTC7A tetratricopeptide repeat domain 7A
TTTY1B testis-specific transcript, Y-linked 1B (non-protein coding)
TTTY9B testis-specific transcript, Y-linked 9B (non-protein coding)
TXNDC15 thioredoxin domain containing 15
UCP1 uncoupling protein 1 (mitochondrial, proton carrier)
ULBP2 UL16 binding protein 2
ULK1 unc-51 like autophagy activating kinase 1
UNC93B1 unc-93 homolog B1 (C. elegans)
UOX urate oxidase, pseudogene
UXS1 UDP-glucuronate decarboxylase 1
VAV3 vav 3 guanine nucleotide exchange factor
VGLL2 vestigial-like family member 2
VPREB1 pre-B lymphocyte 1
VSTM2L V-set and transmembrane domain containing 2 like
VWA5B2 von Willebrand factor A domain containing 5B2
XKR8 XK, Kell blood group complex subunit-related family, member 8
XYLT2 xylosyltransferase II
YBX2 Y box binding protein 2
ZAR1 zygote arrest 1
ZCCHC12 zinc finger, CCHC domain containing 12
ZDHHC14 zinc finger, DHHC-type containing 14
ZDHHC23 zinc finger, DHHC-type containing 23
ZNF232 zinc finger protein 232
ZNF283 zinc finger protein 283
ZNF503 zinc finger protein 503
ZNF503-AS2 ZNF503 antisense RNA 2
ZNF815P zinc finger protein 815, pseudogene
ZPBP zona pellucida binding protein

low expression

Symbol Name
C22ORF39 chromosome 22 open reading frame 39
FAM192A family with sequence similarity 192, member A
POLE3 polymerase (DNA directed), epsilon 3, accessory subunit
PPP2R3C protein phosphatase 2, regulatory subunit B'', gamma
SNAP29 synaptosomal-associated protein, 29kDa
STX17 syntaxin 17