Brain Lower Grade Glioma_LGG_TCGA-S9-A6U1-01A-21R-A33Z-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

113 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-S9-A6U1-01A-21R-A33Z-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ADORA2A-AS1 ADORA2A antisense RNA 1
AKR7A2P1 aldo-keto reductase family 7, member A2 pseudogene 1
ANP32C acidic (leucine-rich) nuclear phosphoprotein 32 family, member C
AOC2 amine oxidase, copper containing 2 (retina-specific)
AQP7P3 aquaporin 7 pseudogene 3
ARL5C ADP-ribosylation factor-like 5C
BICD2 bicaudal D homolog 2 (Drosophila)
BMP3 bone morphogenetic protein 3
BMS1P5 BMS1 ribosome biogenesis factor pseudogene 5
BRD7P3 bromodomain containing 7 pseudogene 3
C10ORF91 chromosome 10 open reading frame 91
C17ORF85 chromosome 17 open reading frame 85
C6ORF163 chromosome 6 open reading frame 163
C7ORF71 chromosome 7 open reading frame 71
CASP9 caspase 9, apoptosis-related cysteine peptidase
CCDC144B coiled-coil domain containing 144B (pseudogene)
CCL3 chemokine (C-C motif) ligand 3
CCL3L1 chemokine (C-C motif) ligand 3-like 1
CCL3L3 chemokine (C-C motif) ligand 3-like 3
CD36 CD36 molecule (thrombospondin receptor)
CHRNG cholinergic receptor, nicotinic, gamma (muscle)
CHST9 carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9
CNTN3 contactin 3 (plasmacytoma associated)
CRHR1-IT1 CRHR1 intronic transcript 1
CST5 cystatin D
CYP2W1 cytochrome P450, family 2, subfamily W, polypeptide 1
DEFB109P1 defensin, beta 109, pseudogene 1
DPPA5 developmental pluripotency associated 5
DUSP27 dual specificity phosphatase 27 (putative)
EFCAB13 EF-hand calcium binding domain 13
EPX eosinophil peroxidase
ETV1 ets variant 1
FAM106A family with sequence similarity 106, member A
FAM212B family with sequence similarity 212, member B
FAM95B1 family with sequence similarity 95, member B1
FRAT1 frequently rearranged in advanced T-cell lymphomas 1
FSD2 fibronectin type III and SPRY domain containing 2
FUT5 fucosyltransferase 5 (alpha (1,3) fucosyltransferase)
GBE1 glucan (1,4-alpha-), branching enzyme 1
GCM2 glial cells missing homolog 2 (Drosophila)
GFRAL GDNF family receptor alpha like
GLUD1 glutamate dehydrogenase 1
GLUD2 glutamate dehydrogenase 2
GOLGA6C golgin A6 family, member C
GPR101 G protein-coupled receptor 101
HMGN2P46 high mobility group nucleosomal binding domain 2 pseudogene 46
HOXA13 homeobox A13
HPSE heparanase
IVNS1ABP influenza virus NS1A binding protein
KHDRBS2 KH domain containing, RNA binding, signal transduction associated 2
KRTAP5-10 keratin associated protein 5-10
LCE2B late cornified envelope 2B
LINC00235 long intergenic non-protein coding RNA 235
LOC100128542
LRRC39 leucine rich repeat containing 39
MED24 mediator complex subunit 24
MEX3C mex-3 RNA binding family member C
MYCL v-myc avian myelocytomatosis viral oncogene lung carcinoma derived homolog
NAIP NLR family, apoptosis inhibitory protein
NUTM2G NUT family member 2G
OLIG2 oligodendrocyte lineage transcription factor 2
OPHN1 oligophrenin 1
OPN1MW opsin 1 (cone pigments), medium-wave-sensitive
OR1J2 olfactory receptor, family 1, subfamily J, member 2
OR5B21 olfactory receptor, family 5, subfamily B, member 21
PCDH15 protocadherin-related 15
PCDHGA2 protocadherin gamma subfamily A, 2
PCDHGA9 protocadherin gamma subfamily A, 9
PCSK6 proprotein convertase subtilisin/kexin type 6
PDC phosducin
PDGFC platelet derived growth factor C
PDK4 pyruvate dehydrogenase kinase, isozyme 4
PER3 period circadian clock 3
PLA2G7 phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma)
POM121L1P POM121 transmembrane nucleoporin-like 1, pseudogene
PRKACG protein kinase, cAMP-dependent, catalytic, gamma
RASA4 RAS p21 protein activator 4
ROCK1 Rho-associated, coiled-coil containing protein kinase 1
RPS15AP10 ribosomal protein S15a pseudogene 10
SARM1 sterile alpha and TIR motif containing 1
SCLT1 sodium channel and clathrin linker 1
SERPINA4 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 4
SLCO6A1 solute carrier organic anion transporter family, member 6A1
SNORA55 small nucleolar RNA, H/ACA box 55
SNORA6 small nucleolar RNA, H/ACA box 6
SNORD22 small nucleolar RNA, C/D box 22
SOX3 SRY (sex determining region Y)-box 3
SOX4 SRY (sex determining region Y)-box 4
SPDYE4 speedy/RINGO cell cycle regulator family member E4
SRRM5 serine/arginine repetitive matrix 5
STAT5B signal transducer and activator of transcription 5B
SULT1C4 sulfotransferase family, cytosolic, 1C, member 4
TAS2R5 taste receptor, type 2, member 5
TBC1D3H TBC1 domain family, member 3H
TMEM236 transmembrane protein 236
TNFSF18 tumor necrosis factor (ligand) superfamily, member 18
TPH1 tryptophan hydroxylase 1
TSSK4 testis-specific serine kinase 4
WNK3 WNK lysine deficient protein kinase 3
WNT5A wingless-type MMTV integration site family, member 5A
ZBTB12 zinc finger and BTB domain containing 12
ZFP14 ZFP14 zinc finger protein
ZNF132 zinc finger protein 132
ZNF160 zinc finger protein 160
ZNF17 zinc finger protein 17
ZNF192P1 zinc finger protein 192 pseudogene 1
ZNF445 zinc finger protein 445
ZNF546 zinc finger protein 546
ZNF551 zinc finger protein 551
ZNF70 zinc finger protein 70
ZPBP2 zona pellucida binding protein 2

low expression

Symbol Name
NIPSNAP1 nipsnap homolog 1 (C. elegans)
PXMP4 peroxisomal membrane protein 4, 24kDa