Brain Lower Grade Glioma_LGG_TCGA-R8-A6ML-01A-11R-A32Q-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

197 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-R8-A6ML-01A-11R-A32Q-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABCB10 ATP-binding cassette, sub-family B (MDR/TAP), member 10
ABCC8 ATP-binding cassette, sub-family C (CFTR/MRP), member 8
ABCG1 ATP-binding cassette, sub-family G (WHITE), member 1
ADA adenosine deaminase
ADAM21 ADAM metallopeptidase domain 21
ADAM29 ADAM metallopeptidase domain 29
ADGRB3 adhesion G protein-coupled receptor B3
ADGRG1 adhesion G protein-coupled receptor G1
ADGRV1 adhesion G protein-coupled receptor V1
ANGEL1 angel homolog 1 (Drosophila)
ANKRD55 ankyrin repeat domain 55
ASB14 ankyrin repeat and SOCS box containing 14
BCL2 B-cell CLL/lymphoma 2
BLID BH3-like motif containing, cell death inducer
BTBD17 BTB (POZ) domain containing 17
C10ORF113 chromosome 10 open reading frame 113
C1ORF220 chromosome 1 open reading frame 220
C1QTNF9 C1q and tumor necrosis factor related protein 9
C2ORF27A chromosome 2 open reading frame 27A
C8ORF86 chromosome 8 open reading frame 86
C9ORF57 chromosome 9 open reading frame 57
C9ORF84 chromosome 9 open reading frame 84
CA10 carbonic anhydrase X
CACNG4 calcium channel, voltage-dependent, gamma subunit 4
CCDC127 coiled-coil domain containing 127
CCDC174 coiled-coil domain containing 174
CCER1 coiled-coil glutamate-rich protein 1
CGB chorionic gonadotropin, beta polypeptide
CGB1 chorionic gonadotropin, beta polypeptide 1
CGB5 chorionic gonadotropin, beta polypeptide 5
CGB8 chorionic gonadotropin, beta polypeptide 8
CHGB chromogranin B
CLEC4F C-type lectin domain family 4, member F
CNTN6 contactin 6
COG2 component of oligomeric golgi complex 2
CPO carboxypeptidase O
CREB3L1 cAMP responsive element binding protein 3-like 1
CRLS1 cardiolipin synthase 1
CSPG5 chondroitin sulfate proteoglycan 5 (neuroglycan C)
CT47B1 cancer/testis antigen family 47, member B1
CTSO cathepsin O
CXORF57 chromosome X open reading frame 57
CYP11B2 cytochrome P450, family 11, subfamily B, polypeptide 2
DDX25 DEAD (Asp-Glu-Ala-Asp) box helicase 25
DGCR9 DiGeorge syndrome critical region gene 9 (non-protein coding)
DISC1 disrupted in schizophrenia 1
DSCR4 Down syndrome critical region 4
DUPD1 dual specificity phosphatase and pro isomerase domain containing 1
EPHB1 EPH receptor B1
ETV5 ets variant 5
EXOG endo/exonuclease (5'-3'), endonuclease G-like
EYA1 EYA transcriptional coactivator and phosphatase 1
FAM133A family with sequence similarity 133, member A
FAM9B family with sequence similarity 9, member B
FARS2 phenylalanyl-tRNA synthetase 2, mitochondrial
FKBP1AP1 FK506 binding protein 1A, 12kDa pseudogene 1
FLG2 filaggrin family member 2
FLVCR2 feline leukemia virus subgroup C cellular receptor family, member 2
FMR1NB fragile X mental retardation 1 neighbor
FSCB fibrous sheath CABYR binding protein
FTHL17 ferritin, heavy polypeptide-like 17
FXYD6 FXYD domain containing ion transport regulator 6
GAGE1 G antigen 1
GAGE12J G antigen 12J
GAGE2A G antigen 2A
GAGE2C G antigen 2C
GAGE2D G antigen 2D
GAGE4 G antigen 4
GATA2 GATA binding protein 2
GCNT2 glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)
GGTLC1 gamma-glutamyltransferase light chain 1
GSTO2 glutathione S-transferase omega 2
HKDC1 hexokinase domain containing 1
HNRNPH2 heterogeneous nuclear ribonucleoprotein H2 (H')
HSPB2 heat shock 27kDa protein 2
HTRA1 HtrA serine peptidase 1
IGFL2 IGF-like family member 2
IGSF11 immunoglobulin superfamily, member 11
IL20 interleukin 20
ING2 inhibitor of growth family, member 2
KANK1 KN motif and ankyrin repeat domains 1
KCNH8 potassium channel, voltage gated eag related subfamily H, member 8
KCNJ11 potassium channel, inwardly rectifying subfamily J, member 11
KDM4E lysine (K)-specific demethylase 4E
KIF3A kinesin family member 3A
KLRC3 killer cell lectin-like receptor subfamily C, member 3
KLRK1 killer cell lectin-like receptor subfamily K, member 1
KRCC1 lysine-rich coiled-coil 1
LCE1A late cornified envelope 1A
LCE2A late cornified envelope 2A
LEO1 Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
LHX3 LIM homeobox 3
LINC00032 long intergenic non-protein coding RNA 32
LINC00176 long intergenic non-protein coding RNA 176
LINC00518 long intergenic non-protein coding RNA 518
LOC100128239 uncharacterized LOC100128239
LOC286359 uncharacterized LOC286359
LOC643923 uncharacterized LOC643923
LOC90246 uncharacterized LOC90246
LPAL2 lipoprotein, Lp(a)-like 2, pseudogene
LRRC75B leucine rich repeat containing 75B
LVRN laeverin
LYSMD1 LysM, putative peptidoglycan-binding, domain containing 1
MADCAM1 mucosal vascular addressin cell adhesion molecule 1
MAGEB3 melanoma antigen family B3
MESDC2 mesoderm development candidate 2
MLLT4-AS1 MLLT4 antisense RNA 1 (head to head)
MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase
MYT1 myelin transcription factor 1
N6AMT1 N-6 adenine-specific DNA methyltransferase 1 (putative)
NAGS N-acetylglutamate synthase
NEDD4 neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase
NLGN3 neuroligin 3
NOMO1 NODAL modulator 1
NRXN2 neurexin 2
NSUN3 NOP2/Sun domain family, member 3
NUDT13 nudix (nucleoside diphosphate linked moiety X)-type motif 13
NUDT17 nudix (nucleoside diphosphate linked moiety X)-type motif 17
NUPL2 nucleoporin like 2
OR1D2 olfactory receptor, family 1, subfamily D, member 2
OR1Q1 olfactory receptor, family 1, subfamily Q, member 1
OR2B2 olfactory receptor, family 2, subfamily B, member 2
OR6B1 olfactory receptor, family 6, subfamily B, member 1
OR8B2 olfactory receptor, family 8, subfamily B, member 2
OR8B3 olfactory receptor, family 8, subfamily B, member 3
PACRGL PARK2 co-regulated-like
PAGE1 P antigen family, member 1 (prostate associated)
PAGE2 P antigen family, member 2 (prostate associated)
PAGE2B P antigen family, member 2B
PAGE5 P antigen family, member 5 (prostate associated)
PCDHA1 protocadherin alpha 1
PCDHB15 protocadherin beta 15
PCDHGA2 protocadherin gamma subfamily A, 2
PCDHGA3 protocadherin gamma subfamily A, 3
PCDHGC3 protocadherin gamma subfamily C, 3
PCDHGC4 protocadherin gamma subfamily C, 4
PGF placental growth factor
PLA2G12B phospholipase A2, group XIIB
PLGLB2 plasminogen-like B2
PPIAL4D peptidylprolyl isomerase A (cyclophilin A)-like 4D
PUS7L pseudouridylate synthase 7 homolog (S. cerevisiae)-like
RAB31 RAB31, member RAS oncogene family
RASSF2 Ras association (RalGDS/AF-6) domain family member 2
REP15 RAB15 effector protein
RGMB repulsive guidance molecule family member b
RHBDL3 rhomboid, veinlet-like 3 (Drosophila)
RIIAD1 regulatory subunit of type II PKA R-subunit (RIIa) domain containing 1
RIOK2 RIO kinase 2
RSRC2 arginine/serine-rich coiled-coil 2
RTKN rhotekin
SCD5 stearoyl-CoA desaturase 5
SELL selectin L
SGCE sarcoglycan, epsilon
SHISA9 shisa family member 9
SIGLEC15 sialic acid binding Ig-like lectin 15
SLAIN1 SLAIN motif family, member 1
SLC14A2 solute carrier family 14 (urea transporter), member 2
SLC19A2 solute carrier family 19 (thiamine transporter), member 2
SLC22A6 solute carrier family 22 (organic anion transporter), member 6
SLC25A20 solute carrier family 25 (carnitine/acylcarnitine translocase), member 20
SLC9B1 solute carrier family 9, subfamily B (NHA1, cation proton antiporter 1), member 1
SMEK3P SMEK homolog 3, suppressor of mek1 (Dictyostelium) pseudogene
SNORA36A small nucleolar RNA, H/ACA box 36A
SNORA56 small nucleolar RNA, H/ACA box 56
SNORA71E small nucleolar RNA, H/ACA box 71E
SPRYD4 SPRY domain containing 4
SSTR2 somatostatin receptor 2
SSX1 synovial sarcoma, X breakpoint 1
SSX2 synovial sarcoma, X breakpoint 2
SSX8 synovial sarcoma, X breakpoint 8
TAF5L TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa
TAS2R43 taste receptor, type 2, member 43
TBC1D28 TBC1 domain family, member 28
TCEAL2 transcription elongation factor A (SII)-like 2
TCEAL4 transcription elongation factor A (SII)-like 4
TCEAL8 transcription elongation factor A (SII)-like 8
TM4SF19 transmembrane 4 L six family member 19
TRMT11 tRNA methyltransferase 11 homolog (S. cerevisiae)
TTC38 tetratricopeptide repeat domain 38
TUBA3C tubulin, alpha 3c
UHRF1 ubiquitin-like with PHD and ring finger domains 1
USP17L6P ubiquitin specific peptidase 17-like family member 6, pseudogene
VAPA VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa
VEPH1 ventricular zone expressed PH domain-containing 1
VILL villin-like
WBP5 WW domain binding protein 5
WFDC10B WAP four-disulfide core domain 10B
XAGE1E X antigen family, member 1E
XAGE5 X antigen family, member 5
ZCCHC24 zinc finger, CCHC domain containing 24
ZDHHC11 zinc finger, DHHC-type containing 11
ZDHHC22 zinc finger, DHHC-type containing 22
ZFR2 zinc finger RNA binding protein 2
ZNF720 zinc finger protein 720

low expression

Symbol Name
AMZ2P1 archaelysin family metallopeptidase 2 pseudogene 1
FUBP1 far upstream element (FUSE) binding protein 1
RAD51C RAD51 paralog C