Brain Lower Grade Glioma_LGG_TCGA-QH-A6X9-01A-12R-A32Q-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

322 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-QH-A6X9-01A-12R-A32Q-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ACAD8 acyl-CoA dehydrogenase family, member 8
ACAP3 ArfGAP with coiled-coil, ankyrin repeat and PH domains 3
ACTL7B actin-like 7B
ADGRB1 adhesion G protein-coupled receptor B1
AKAP7 A kinase (PRKA) anchor protein 7
ANKRD12 ankyrin repeat domain 12
APBA2 amyloid beta (A4) precursor protein-binding, family A, member 2
ARCN1 archain 1
ARGLU1 arginine and glutamate rich 1
ARHGAP28 Rho GTPase activating protein 28
ARHGAP32 Rho GTPase activating protein 32
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12
ARHGEF7 Rho guanine nucleotide exchange factor (GEF) 7
ARID4A AT rich interactive domain 4A (RBP1-like)
ARMC8 armadillo repeat containing 8
ATF5 activating transcription factor 5
ATXN7L2 ataxin 7-like 2
B3GALT1 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1
B3GAT1 beta-1,3-glucuronyltransferase 1
BCL9L B-cell CLL/lymphoma 9-like
BEST3 bestrophin 3
BIVM basic, immunoglobulin-like variable motif containing
BOC BOC cell adhesion associated, oncogene regulated
BUD13 BUD13 homolog (S. cerevisiae)
C10ORF111 chromosome 10 open reading frame 111
C17ORF98 chromosome 17 open reading frame 98
C1ORF177 chromosome 1 open reading frame 177
C3ORF22 chromosome 3 open reading frame 22
C4ORF45 chromosome 4 open reading frame 45
C5ORF42 chromosome 5 open reading frame 42
CACNA2D1 calcium channel, voltage-dependent, alpha 2/delta subunit 1
CADM1 cell adhesion molecule 1
CAGE1 cancer antigen 1
CBLL1 Cbl proto-oncogene-like 1, E3 ubiquitin protein ligase
CCAR1 cell division cycle and apoptosis regulator 1
CCDC15 coiled-coil domain containing 15
CCER1 coiled-coil glutamate-rich protein 1
CCNT2 cyclin T2
CDK15 cyclin-dependent kinase 15
CDON cell adhesion associated, oncogene regulated
CHD9 chromodomain helicase DNA binding protein 9
CLK1 CDC-like kinase 1
CLSTN2 calsyntenin 2
CNOT6 CCR4-NOT transcription complex, subunit 6
COL6A4P2 collagen, type VI, alpha 4 pseudogene 2
CPSF6 cleavage and polyadenylation specific factor 6, 68kDa
CTPS2 CTP synthase 2
CTTNBP2 cortactin binding protein 2
CYLC1 cylicin, basic protein of sperm head cytoskeleton 1
DDX25 DEAD (Asp-Glu-Ala-Asp) box helicase 25
DDX6 DEAD (Asp-Glu-Ala-Asp) box helicase 6
DENND1B DENN/MADD domain containing 1B
DIS3 DIS3 exosome endoribonuclease and 3'-5' exoribonuclease
DPP6 dipeptidyl-peptidase 6
DRD2 dopamine receptor D2
DSCAML1 Down syndrome cell adhesion molecule like 1
DZIP1 DAZ interacting zinc finger protein 1
EFCAB5 EF-hand calcium binding domain 5
EI24 etoposide induced 2.4
EIF1AX eukaryotic translation initiation factor 1A, X-linked
ELAVL4 ELAV like neuron-specific RNA binding protein 4
EME2 essential meiotic structure-specific endonuclease subunit 2
EPB41 erythrocyte membrane protein band 4.1
ERCC5 excision repair cross-complementation group 5
ESPNP espin pseudogene
ESYT2 extended synaptotagmin-like protein 2
ETV1 ets variant 1
EYA1 EYA transcriptional coactivator and phosphatase 1
FAM155A family with sequence similarity 155, member A
FAM177A1 family with sequence similarity 177, member A1
FAM212B family with sequence similarity 212, member B
FAM47A family with sequence similarity 47, member A
FAM92A1P2 family with sequence similarity 92, member A3
FAM98B family with sequence similarity 98, member B
FBXO11 F-box protein 11
FBXO47 F-box protein 47
FGF14 fibroblast growth factor 14
FOXD4L5 forkhead box D4-like 5
FOXP2 forkhead box P2
FOXR1 forkhead box R1
GAGE1 G antigen 1
GDPD1 glycerophosphodiester phosphodiesterase domain containing 1
GLCCI1 glucocorticoid induced 1
GLP1R glucagon-like peptide 1 receptor
GOLGA6L1 golgin A6 family-like 1
GOLGA6L5P golgin A6 family-like 5, pseudogene
GOLGA6L6 golgin A6 family-like 6
GOLGA8IP golgin A8 family, member I, pseudogene
GPM6A glycoprotein M6A
GPR153 G protein-coupled receptor 153
GPR45 G protein-coupled receptor 45
GRIA3 glutamate receptor, ionotropic, AMPA 3
GRIK3 glutamate receptor, ionotropic, kainate 3
GRIK4 glutamate receptor, ionotropic, kainate 4
GSTM2 glutathione S-transferase mu 2 (muscle)
GTF2I general transcription factor IIi
GUSBP1 glucuronidase, beta pseudogene 1
HCG4B HLA complex group 4B (non-protein coding)
HDHD1 haloacid dehalogenase-like hydrolase domain containing 1
HINFP histone H4 transcription factor
HIST3H2BB histone cluster 3, H2bb
HOMER1 homer scaffolding protein 1
HRH4 histamine receptor H4
HSFY1P1 heat shock transcription factor, Y-linked 1 pseudogene 1
ICA1L islet cell autoantigen 1,69kDa-like
IGFBPL1 insulin-like growth factor binding protein-like 1
IGLL3P immunoglobulin lambda-like polypeptide 3, pseudogene
ING3 inhibitor of growth family, member 3
INSM1 insulinoma-associated 1
INSM2 insulinoma-associated 2
IPW imprinted in Prader-Willi syndrome (non-protein coding)
JKAMP JNK1/MAPK8-associated membrane protein
KCND2 potassium channel, voltage gated Shal related subfamily D, member 2
KCND3 potassium channel, voltage gated Shal related subfamily D, member 3
KCNMB2 potassium channel subfamily M regulatory beta subunit 2
KGFLP2 keratinocyte growth factor-like protein 2
KIAA0087 KIAA0087
KLB klotho beta
KLHL13 kelch-like family member 13
KLHL8 kelch-like family member 8
KLRC2 killer cell lectin-like receptor subfamily C, member 2
KLRC4 killer cell lectin-like receptor subfamily C, member 4
KMT2A lysine (K)-specific methyltransferase 2A
KRTAP13-3 keratin associated protein 13-3
KRTAP5-11 keratin associated protein 5-11
KRTAP5-7 keratin associated protein 5-7
LDHAL6A lactate dehydrogenase A-like 6A
LGR5 leucine-rich repeat containing G protein-coupled receptor 5
LHX5 LIM homeobox 5
LIM2 lens intrinsic membrane protein 2, 19kDa
LINC00474 long intergenic non-protein coding RNA 474
LOC100128239 uncharacterized LOC100128239
LOC100272216 uncharacterized LOC100272216
LOC400794 uncharacterized LOC400794
LOC441204 uncharacterized LOC441204
LOC441666 zinc finger protein 91 pseudogene
LOC646471 uncharacterized LOC646471
LOC646999 akirin 1 pseudogene
LUC7L2 LUC7-like 2 (S. cerevisiae)
LY6G5B lymphocyte antigen 6 complex, locus G5B
MAGEA8 melanoma antigen family A8
MARCH5 membrane-associated ring finger (C3HC4) 5
MASP2 mannan-binding lectin serine peptidase 2
METTL2B methyltransferase like 2B
MKRN3 makorin ring finger protein 3
MSANTD2 Myb/SANT-like DNA-binding domain containing 2
MSANTD4 Myb/SANT-like DNA-binding domain containing 4 with coiled-coils
MTX3 metaxin 3
MYEF2 myelin expression factor 2
MYO16 myosin XVI
MZT1 mitotic spindle organizing protein 1
NAA40 N(alpha)-acetyltransferase 40, NatD catalytic subunit
NALCN sodium leak channel, non selective
NCAPD3 non-SMC condensin II complex, subunit D3
NETO1 neuropilin (NRP) and tolloid (TLL)-like 1
NFRKB nuclear factor related to kappaB binding protein
NHEG1 neuroblastoma highly expressed 1
NLGN4X neuroligin 4, X-linked
NOXO1 NADPH oxidase organizer 1
NR1H4 nuclear receptor subfamily 1, group H, member 4
NRCAM neuronal cell adhesion molecule
NUDT21 nudix (nucleoside diphosphate linked moiety X)-type motif 21
NXPE4 neurexophilin and PC-esterase domain family, member 4
NYNRIN NYN domain and retroviral integrase containing
OGT O-linked N-acetylglucosamine (GlcNAc) transferase
OR10G4 olfactory receptor, family 10, subfamily G, member 4
OR10G9 olfactory receptor, family 10, subfamily G, member 9
OR10H2 olfactory receptor, family 10, subfamily H, member 2
OR2F1 olfactory receptor, family 2, subfamily F, member 1 (gene/pseudogene)
OR4F21 olfactory receptor, family 4, subfamily F, member 21
OR52E2 olfactory receptor, family 52, subfamily E, member 2
OVCH1 ovochymase 1
PAFAH1B2 platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)
PAPD4 PAP associated domain containing 4
PCCA propionyl CoA carboxylase, alpha polypeptide
PCDH15 protocadherin-related 15
PCDHA10 protocadherin alpha 10
PCDHA6 protocadherin alpha 6
PCDHGA12 protocadherin gamma subfamily A, 12
PCDHGA3 protocadherin gamma subfamily A, 3
PCNXL4 pecanex-like 4 (Drosophila)
PCSK7 proprotein convertase subtilisin/kexin type 7
PDC phosducin
PFN2 profilin 2
PHLDB1 pleckstrin homology-like domain, family B, member 1
PIK3R1 phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
PKD2L2 polycystic kidney disease 2-like 2
PLA2G2C phospholipase A2, group IIC
PNISR PNN-interacting serine/arginine-rich protein
PNPLA8 patatin-like phospholipase domain containing 8
POU2F1 POU class 2 homeobox 1
POU4F1 POU class 4 homeobox 1
PPM1A protein phosphatase, Mg2+/Mn2+ dependent, 1A
PPP1R12A protein phosphatase 1, regulatory subunit 12A
PRDM10 PR domain containing 10
PRG1 p53-responsive gene 1
PROX1 prospero homeobox 1
PRPF4B pre-mRNA processing factor 4B
PRR35 proline rich 35
PRRC2A proline-rich coiled-coil 2A
PSG3 pregnancy specific beta-1-glycoprotein 3
PSKH2 protein serine kinase H2
PTPRK protein tyrosine phosphatase, receptor type, K
PTPRS protein tyrosine phosphatase, receptor type, S
PUS3 pseudouridylate synthase 3
RAP2A RAP2A, member of RAS oncogene family
RAVER2 ribonucleoprotein, PTB-binding 2
RBM26 RNA binding motif protein 26
RBM7 RNA binding motif protein 7
RBM8A RNA binding motif protein 8A
RERE arginine-glutamic acid dipeptide (RE) repeats
RFPL3 ret finger protein-like 3
RGAG1 retrotransposon gag domain containing 1
RGSL1 regulator of G-protein signaling like 1
RIC3 RIC3 acetylcholine receptor chaperone
RLF rearranged L-myc fusion
RNF214 ring finger protein 214
RNF219 ring finger protein 219
RNPC3 RNA-binding region (RNP1, RRM) containing 3
RPL23AP64 ribosomal protein L23a pseudogene 64
RSPH6A radial spoke head 6 homolog A (Chlamydomonas)
SC5D sterol-C5-desaturase
SDHAP2 succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 2
SEMA3D sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D
SENP7 SUMO1/sentrin specific peptidase 7
SEPT7P9 septin 7 pseudogene 9
SFPQ splicing factor proline/glutamine-rich
SIK3 SIK family kinase 3
SLC35E2 solute carrier family 35, member E2
SLC5A12 solute carrier family 5 (sodium/monocarboxylate cotransporter), member 12
SLFN11 schlafen family member 11
SNORA29 small nucleolar RNA, H/ACA box 29
SNORA2A small nucleolar RNA, H/ACA box 2A
SNORA55 small nucleolar RNA, H/ACA box 55
SNORA59B small nucleolar RNA, H/ACA box 59B
SNORD115-26 small nucleolar RNA, C/D box 115-26
SNORD116-20 small nucleolar RNA, C/D box 116-20
SNORD116-28 small nucleolar RNA, C/D box 116-28
SNORD116-4 small nucleolar RNA, C/D box 116-4
SNX19 sorting nexin 19
SPACA4 sperm acrosome associated 4
SPATA16 spermatogenesis associated 16
SPHKAP SPHK1 interactor, AKAP domain containing
SUB1 SUB1 homolog (S. cerevisiae)
SUV420H1 suppressor of variegation 4-20 homolog 1 (Drosophila)
TAPT1 transmembrane anterior posterior transformation 1
TAS2R4 taste receptor, type 2, member 4
TBCEL tubulin folding cofactor E-like
TBRG1 transforming growth factor beta regulator 1
TCERG1 transcription elongation regulator 1
TECTA tectorin alpha
TGDS TDP-glucose 4,6-dehydratase
THAP5 THAP domain containing 5
THYN1 thymocyte nuclear protein 1
TIRAP toll-interleukin 1 receptor (TIR) domain containing adaptor protein
TMEFF2 transmembrane protein with EGF-like and two follistatin-like domains 2
TMEM136 transmembrane protein 136
TMEM196 transmembrane protein 196
TMEM236 transmembrane protein 236
TMEM25 transmembrane protein 25
TNPO3 transportin 3
TRAPPC4 trafficking protein particle complex 4
TREH trehalase (brush-border membrane glycoprotein)
TRIM13 tripartite motif containing 13
TRIM33 tripartite motif containing 33
TRIM43 tripartite motif containing 43
TSHZ1 teashirt zinc finger homeobox 1
TTLL8 tubulin tyrosine ligase-like family member 8
TUBGCP3 tubulin, gamma complex associated protein 3
UBE2H ubiquitin-conjugating enzyme E2H
UBE2Q2P1 ubiquitin-conjugating enzyme E2Q family member 2 pseudogene 1
UBE4A ubiquitination factor E4A
UBN2 ubinuclein 2
UGGT2 UDP-glucose glycoprotein glucosyltransferase 2
UPF3B UPF3 regulator of nonsense transcripts homolog B (yeast)
UPK2 uroplakin 2
UPP2 uridine phosphorylase 2
UROC1 urocanate hydratase 1
USP17L6P ubiquitin specific peptidase 17-like family member 6, pseudogene
USP28 ubiquitin specific peptidase 28
VIPR2 vasoactive intestinal peptide receptor 2
VPS11 vacuolar protein sorting 11 homolog (S. cerevisiae)
VPS26B vacuolar protein sorting 26 homolog B (S. pombe)
WDR60 WD repeat domain 60
XIST X inactive specific transcript (non-protein coding)
YLPM1 YLP motif containing 1
ZBED9 zinc finger, BED-type containing 9
ZBTB1 zinc finger and BTB domain containing 1
ZBTB44 zinc finger and BTB domain containing 44
ZFP69B ZFP69 zinc finger protein B
ZFPM2 zinc finger protein, FOG family member 2
ZNF10 zinc finger protein 10
ZNF112 zinc finger protein 112
ZNF202 zinc finger protein 202
ZNF223 zinc finger protein 223
ZNF292 zinc finger protein 292
ZNF326 zinc finger protein 326
ZNF33A zinc finger protein 33A
ZNF382 zinc finger protein 382
ZNF431 zinc finger protein 431
ZNF449 zinc finger protein 449
ZNF461 zinc finger protein 461
ZNF493 zinc finger protein 493
ZNF519 zinc finger protein 519
ZNF529 zinc finger protein 529
ZNF566 zinc finger protein 566
ZNF608 zinc finger protein 608
ZNF682 zinc finger protein 682
ZNF721 zinc finger protein 721
ZNF738 zinc finger protein 738
ZNF774 zinc finger protein 774
ZNF780B zinc finger protein 780B
ZNF793 zinc finger protein 793
ZNF804B zinc finger protein 804B
ZNF84 zinc finger protein 84
ZNF92 zinc finger protein 92
ZRANB2 zinc finger, RAN-binding domain containing 2

low expression

Symbol Name
HDLBP high density lipoprotein binding protein
PBDC1 polysaccharide biosynthesis domain containing 1
SMIM8 small integral membrane protein 8
THEM4 thioesterase superfamily member 4
ZDHHC6 zinc finger, DHHC-type containing 6