Brain Lower Grade Glioma_LGG_TCGA-QH-A65V-01A-11R-A29R-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

239 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-QH-A65V-01A-11R-A29R-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABHD17B abhydrolase domain containing 17B
ACADS acyl-CoA dehydrogenase, C-2 to C-3 short chain
ADARB2 adenosine deaminase, RNA-specific, B2 (non-functional)
ADIPOR2 adiponectin receptor 2
ALG1L ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase-like
ALG5 ALG5, dolichyl-phosphate beta-glucosyltransferase
AMT aminomethyltransferase
ANLN anillin, actin binding protein
ARRDC2 arrestin domain containing 2
ASIC5 acid sensing (proton gated) ion channel family member 5
ASIP agouti signaling protein
ASPA aspartoacylase
BEX4 brain expressed, X-linked 4
BIN1 bridging integrator 1
BOK BCL2-related ovarian killer
C10ORF62 chromosome 10 open reading frame 62
C10ORF99 chromosome 10 open reading frame 99
C15ORF40 chromosome 15 open reading frame 40
C19ORF73 chromosome 19 open reading frame 73
C1ORF198 chromosome 1 open reading frame 198
C2ORF74 chromosome 2 open reading frame 74
C2ORF76 chromosome 2 open reading frame 76
C4ORF27 chromosome 4 open reading frame 27
C9ORF57 chromosome 9 open reading frame 57
C9ORF66 chromosome 9 open reading frame 66
CAPN3 calpain 3, (p94)
CATSPER2P1 cation channel, sperm associated 2 pseudogene 1
CBS cystathionine-beta-synthase
CCT6B chaperonin containing TCP1, subunit 6B (zeta 2)
CD81 CD81 molecule
CDC42EP1 CDC42 effector protein (Rho GTPase binding) 1
CDC42EP2 CDC42 effector protein (Rho GTPase binding) 2
CDKN1A cyclin-dependent kinase inhibitor 1A (p21, Cip1)
CFL2 cofilin 2 (muscle)
CHADL chondroadherin-like
CIB1 calcium and integrin binding 1 (calmyrin)
CIDEC cell death-inducing DFFA-like effector c
CLCA2 chloride channel accessory 2
CLDND1 claudin domain containing 1
CNP 2',3'-cyclic nucleotide 3' phosphodiesterase
COL4A5 collagen, type IV, alpha 5
COX18 COX18 cytochrome c oxidase assembly factor
COX7B2 cytochrome c oxidase subunit VIIb2
CPB2 carboxypeptidase B2 (plasma)
CPLX3 complexin 3
CPOX coproporphyrinogen oxidase
CSDC2 cold shock domain containing C2, RNA binding
DAD1 defender against cell death 1
DBNDD2 dysbindin (dystrobrevin binding protein 1) domain containing 2
DGCR6 DiGeorge syndrome critical region gene 6
DHRS12 dehydrogenase/reductase (SDR family) member 12
DHRS4L2 dehydrogenase/reductase (SDR family) member 4 like 2
DKFZP779M0652 uncharacterized DKFZp779M0652
DNAJC25-GNG10 DNAJC25-GNG10 readthrough
DOHH deoxyhypusine hydroxylase/monooxygenase
DSG3 desmoglein 3
DYTN dystrotelin
EIF4EBP3 eukaryotic translation initiation factor 4E binding protein 3
ERMN ermin, ERM-like protein
FA2H fatty acid 2-hydroxylase
FAAH fatty acid amide hydrolase
FAHD2A fumarylacetoacetate hydrolase domain containing 2A
FAM107A family with sequence similarity 107, member A
FAM131C family with sequence similarity 131, member C
FAM178B family with sequence similarity 178, member B
FAM19A4 family with sequence similarity 19 (chemokine (C-C motif)-like), member A4
FAM213A family with sequence similarity 213, member A
FAM58A family with sequence similarity 58, member A
FDXR ferredoxin reductase
FEZ1 fasciculation and elongation protein zeta 1 (zygin I)
FKBP6 FK506 binding protein 6, 36kDa
FLJ42393 uncharacterized LOC401105
FN3KRP fructosamine 3 kinase related protein
FOLH1 folate hydrolase (prostate-specific membrane antigen) 1
FXYD4 FXYD domain containing ion transport regulator 4
GATA2 GATA binding protein 2
GATSL3 GATS protein-like 3
GJB1 gap junction protein, beta 1, 32kDa
GJC2 gap junction protein, gamma 2, 47kDa
GOLGA7 golgin A7
GPIHBP1 glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1
GPKOW G patch domain and KOW motifs
GPR62 G protein-coupled receptor 62
GPX2 glutathione peroxidase 2
GRINA glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)
HAPLN2 hyaluronan and proteoglycan link protein 2
HBQ1 hemoglobin, theta 1
HDAC11 histone deacetylase 11
HDGFL1 hepatoma derived growth factor-like 1
HIGD2B HIG1 hypoxia inducible domain family, member 2B
HMOX2 heme oxygenase 2
HOMER3 homer scaffolding protein 3
HOXD1 homeobox D1
HPR haptoglobin-related protein
HSPB8 heat shock 22kDa protein 8
HTRA1 HtrA serine peptidase 1
IP6K3 inositol hexakisphosphate kinase 3
ISCA2 iron-sulfur cluster assembly 2
ITPK1 inositol-tetrakisphosphate 1-kinase
JUND jun D proto-oncogene
KBTBD11 kelch repeat and BTB (POZ) domain containing 11
KCNJ11 potassium channel, inwardly rectifying subfamily J, member 11
KCNMB4 potassium channel subfamily M regulatory beta subunit 4
KDSR 3-ketodihydrosphingosine reductase
KLB klotho beta
KLF9 Kruppel-like factor 9
KLK6 kallikrein-related peptidase 6
LARP6 La ribonucleoprotein domain family, member 6
LDB3 LIM domain binding 3
LHPP phospholysine phosphohistidine inorganic pyrophosphate phosphatase
LINC00162 long intergenic non-protein coding RNA 162
LINC01554 long intergenic non-protein coding RNA 1554
LINC01555 long intergenic non-protein coding RNA 1555
LIPE lipase, hormone-sensitive
LOC100126784 uncharacterized LOC100126784
LOC100129935 lectin, galactoside-binding, soluble, 14 pseudogene
LOC151174 uncharacterized LOC151174
LOC389033 placenta-specific 9 pseudogene
LOC644172 mitogen-activated protein kinase 8 interacting protein 1 pseudogene
LOC650293 seven transmembrane helix receptor
LY6G6E lymphocyte antigen 6 complex, locus G6E (pseudogene)
MADCAM1 mucosal vascular addressin cell adhesion molecule 1
MAG myelin associated glycoprotein
MAGED4 melanoma antigen family D4
MAL mal, T-cell differentiation protein
MAP6D1 MAP6 domain containing 1
MARCH3 membrane-associated ring finger (C3HC4) 3, E3 ubiquitin protein ligase
MCMDC2 minichromosome maintenance domain containing 2
MED4 mediator complex subunit 4
MGC16025 uncharacterized LOC85009
MID1IP1 MID1 interacting protein 1
MOG myelin oligodendrocyte glycoprotein
MOGAT3 monoacylglycerol O-acyltransferase 3
MPC1 mitochondrial pyruvate carrier 1
MRPL57 mitochondrial ribosomal protein L57
MSRB1 methionine sulfoxide reductase B1
MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase
N6AMT2 N-6 adenine-specific DNA methyltransferase 2 (putative)
NDUFAF1 NADH dehydrogenase (ubiquinone) complex I, assembly factor 1
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha
NIF3L1 NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)
NINJ2 ninjurin 2
NKX6-2 NK6 homeobox 2
NMRAL1 NmrA-like family domain containing 1
NPY neuropeptide Y
NRL neural retina leucine zipper
OLMALINC oligodendrocyte maturation-associated long intergenic non-coding RNA
OR2L8 olfactory receptor, family 2, subfamily L, member 8 (gene/pseudogene)
OR2M3 olfactory receptor, family 2, subfamily M, member 3
OR2T29 olfactory receptor, family 2, subfamily T, member 29
OR4N3P olfactory receptor, family 4, subfamily N, member 3 pseudogene
OR52I2 olfactory receptor, family 52, subfamily I, member 2
OR6V1 olfactory receptor, family 6, subfamily V, member 1
PACSIN3 protein kinase C and casein kinase substrate in neurons 3
PAPL iron/zinc purple acid phosphatase-like protein
PCDHB4 protocadherin beta 4
PCDHGA10 protocadherin gamma subfamily A, 10
PDZD9 PDZ domain containing 9
PEBP1 phosphatidylethanolamine binding protein 1
PEX16 peroxisomal biogenesis factor 16
PEX7 peroxisomal biogenesis factor 7
PGLYRP3 peptidoglycan recognition protein 3
PHLDA3 pleckstrin homology-like domain, family A, member 3
PIP4K2A phosphatidylinositol-5-phosphate 4-kinase, type II, alpha
PLA2G4C phospholipase A2, group IVC (cytosolic, calcium-independent)
PLEKHB1 pleckstrin homology domain containing, family B (evectins) member 1
PLLP plasmolipin
POC1B POC1 centriolar protein B
PON1 paraoxonase 1
PPP1R14A protein phosphatase 1, regulatory (inhibitor) subunit 14A
PRCD progressive rod-cone degeneration
PRPSAP2 phosphoribosyl pyrophosphate synthetase-associated protein 2
PRR18 proline rich 18
PSAPL1 prosaposin-like 1 (gene/pseudogene)
PSG7 pregnancy specific beta-1-glycoprotein 7 (gene/pseudogene)
PTGES3 prostaglandin E synthase 3 (cytosolic)
PWP2 PWP2 periodic tryptophan protein homolog (yeast)
R3HCC1 R3H domain and coiled-coil containing 1
RALGDS ral guanine nucleotide dissociation stimulator
RBP7 retinol binding protein 7, cellular
RENBP renin binding protein
RHOB ras homolog family member B
RHOG ras homolog family member G
ROGDI rogdi homolog (Drosophila)
S1PR5 sphingosine-1-phosphate receptor 5
SDS serine dehydratase
SDSL serine dehydratase-like
SEPT4 septin 4
SERPINB12 serpin peptidase inhibitor, clade B (ovalbumin), member 12
SERPINB13 serpin peptidase inhibitor, clade B (ovalbumin), member 13
SFTPC surfactant protein C
SLC25A18 solute carrier family 25 (glutamate carrier), member 18
SLC2A4 solute carrier family 2 (facilitated glucose transporter), member 4
SLC31A2 solute carrier family 31 (copper transporter), member 2
SLC39A14 solute carrier family 39 (zinc transporter), member 14
SLC48A1 solute carrier family 48 (heme transporter), member 1
SLC5A11 solute carrier family 5 (sodium/inositol cotransporter), member 11
SLCO1A2 solute carrier organic anion transporter family, member 1A2
SMOX spermine oxidase
SPACA5 sperm acrosome associated 5
SPCS2 signal peptidase complex subunit 2 homolog (S. cerevisiae)
SPINK9 serine peptidase inhibitor, Kazal type 9
SREBF1 sterol regulatory element binding transcription factor 1
STMN4 stathmin-like 4
SUN3 Sad1 and UNC84 domain containing 3
SUV39H1 suppressor of variegation 3-9 homolog 1 (Drosophila)
TALDO1 transaldolase 1
TAS2R39 taste receptor, type 2, member 39
TBC1D10A TBC1 domain family, member 10A
TEX35 testis expressed 35
TF transferrin
TIMMDC1 translocase of inner mitochondrial membrane domain containing 1
TMCO2 transmembrane and coiled-coil domains 2
TMEM125 transmembrane protein 125
TMEM141 transmembrane protein 141
TMEM151A transmembrane protein 151A
TMEM178A transmembrane protein 178A
TMEM88B transmembrane protein 88B
TMEM95 transmembrane protein 95
TMPRSS11A transmembrane protease, serine 11A
TNIP2 TNFAIP3 interacting protein 2
TP53TG5 TP53 target 5
TRIM55 tripartite motif containing 55
TRMT61A tRNA methyltransferase 61A
TSIX TSIX transcript, XIST antisense RNA
TSPAN8 tetraspanin 8
TYMSOS TYMS opposite strand
UBAC1 UBA domain containing 1
UPK3BL uroplakin 3B-like
VAPA VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa
VIMP VCP-interacting membrane selenoprotein
VSX2 visual system homeobox 2
WFDC6 WAP four-disulfide core domain 6
ZAN zonadhesin (gene/pseudogene)
ZNF652 zinc finger protein 652

low expression

Symbol Name
GON4L gon-4-like (C. elegans)
KDM2A lysine (K)-specific demethylase 2A
PSME3 proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki)
TRERF1 transcriptional regulating factor 1